RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 SFRP4Q6FHJ7 346 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-229ENST00000621897 RGS7BPQ6MZT1 257 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-229ENST00000621897 OVCH2Q7RTZ1 564 aa5.55□□□□□ -1.52
BRCA1-229ENST00000621897 DAAM2Q86T65 1068 aa5.55□□□□□ -1.52
BRCA1-229ENST00000621897 ZNF280BQ86YH2 543 aa5.55□□□□□ -1.52
BRCA1-229ENST00000621897 ATG4AQ8WYN0 398 aa5.55□□□□□ -1.52
BRCA1-229ENST00000621897 PTDSS2Q9BVG9 487 aa5.55□□□□□ -1.52
BRCA1-229ENST00000621897 TRIM54Q9BYV2 358 aa5.55□□□□□ -1.52
BRCA1-229ENST00000621897 ATP6V0A4Q9HBG4 840 aa5.55□□□□□ -1.52
BRCA1-229ENST00000621897 CNNM1Q9NRU3 951 aa5.55□□□□□ -1.52
BRCA1-229ENST00000621897 PIH1D1Q9NWS0 290 aaKnown RBP5.55□□□□□ -1.52
BRCA1-229ENST00000621897 NDRG4Q9ULP0 352 aaKnown RBP5.55□□□□□ -1.52
BRCA1-229ENST00000621897 NOB1Q9ULX3 412 aaKnown RBP5.55□□□□□ -1.52
BRCA1-229ENST00000621897 H0YIZ8 118 aa5.54□□□□□ -1.52
BRCA1-229ENST00000621897 ZNF213O14771 459 aa5.54□□□□□ -1.52
BRCA1-229ENST00000621897 SLC16A3O15427 465 aaKnown RBP5.54□□□□□ -1.52
BRCA1-229ENST00000621897 TUSC2O75896 110 aa5.54□□□□□ -1.52
BRCA1-229ENST00000621897 NXPH3O95157 252 aa5.54□□□□□ -1.52
BRCA1-229ENST00000621897 HNRNPCP07910 306 aaKnown RBP eCLIP5.54□□□□□ -1.52
BRCA1-229ENST00000621897 IL6RP08887 468 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-229ENST00000621897 KITP10721 976 aa5.54□□□□□ -1.52
BRCA1-229ENST00000621897 PPIFP30405 207 aaKnown RBP5.54□□□□□ -1.52
BRCA1-229ENST00000621897 AGFG1P52594 562 aaKnown RBP5.54□□□□□ -1.52
BRCA1-229ENST00000621897 ARFIP2P53365 341 aa5.54□□□□□ -1.52
BRCA1-229ENST00000621897 TFF2Q03403 129 aa5.54□□□□□ -1.52
BRCA1-229ENST00000621897 ZIK1Q3SY52 487 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-229ENST00000621897 PLAC9Q5JTB6 97 aa5.54□□□□□ -1.52
BRCA1-229ENST00000621897 TREML2Q5T2D2 321 aa5.54□□□□□ -1.52
BRCA1-229ENST00000621897 FCRLBQ6BAA4 426 aa5.54□□□□□ -1.52
BRCA1-229ENST00000621897 SWSAP1Q6NVH7 229 aa5.54□□□□□ -1.52
BRCA1-229ENST00000621897 NPNTQ6UXI9 565 aa5.54□□□□□ -1.52
BRCA1-229ENST00000621897 SRRM1Q8IYB3 904 aaKnown RBP5.54□□□□□ -1.52
BRCA1-229ENST00000621897 DDB2Q92466 427 aa5.54□□□□□ -1.52
BRCA1-229ENST00000621897 B3GNT5Q9BYG0 378 aa5.54□□□□□ -1.52
BRCA1-229ENST00000621897 PADI4Q9UM07 663 aa5.54□□□□□ -1.52
BRCA1-229ENST00000621897 TMX2Q9Y320 296 aa5.54□□□□□ -1.52
BRCA1-229ENST00000621897 A0A087WWL8 130 aa5.53□□□□□ -1.52
BRCA1-229ENST00000621897 FESP07332 822 aa5.53□□□□□ -1.52
BRCA1-229ENST00000621897 CSF1RP07333 972 aa5.53□□□□□ -1.52
BRCA1-229ENST00000621897 NDUFB7P17568 137 aa5.53□□□□□ -1.52
BRCA1-229ENST00000621897 TEDDM1Q5T9Z0 273 aa5.53□□□□□ -1.52
BRCA1-229ENST00000621897 SLC15A4Q8N697 577 aa5.53□□□□□ -1.52
BRCA1-229ENST00000621897 DNAJC5GQ8N7S2 189 aa5.53□□□□□ -1.52
BRCA1-229ENST00000621897 HASPINQ8TF76 798 aa5.53□□□□□ -1.52
BRCA1-229ENST00000621897 GLG1Q92896 1179 aa5.53□□□□□ -1.52
BRCA1-229ENST00000621897 RUNDC1Q96C34 613 aa5.53□□□□□ -1.52
BRCA1-229ENST00000621897 CXorf36Q9H7Y0 433 aa5.53□□□□□ -1.52
BRCA1-229ENST00000621897 DLL3Q9NYJ7 618 aa5.53□□□□□ -1.52
BRCA1-229ENST00000621897 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-229ENST00000621897 A0A1W2PPL8 197 aa5.52□□□□□ -1.53
BRCA1-229ENST00000621897 TMEM233B4DJY2 109 aa5.52□□□□□ -1.53
BRCA1-229ENST00000621897 ERC2O15083 957 aa5.52□□□□□ -1.53
BRCA1-229ENST00000621897 TLR5O60602 858 aa5.52□□□□□ -1.53
BRCA1-229ENST00000621897 SCGB1D2O95969 90 aa5.52□□□□□ -1.53
BRCA1-229ENST00000621897 CYP2C18P33260 490 aa5.52□□□□□ -1.53
BRCA1-229ENST00000621897 MYO1EQ12965 1108 aa5.52□□□□□ -1.53
BRCA1-229ENST00000621897 CTBP1Q13363 440 aa5.52□□□□□ -1.53
BRCA1-229ENST00000621897 ANO6Q4KMQ2 910 aa5.52□□□□□ -1.53
BRCA1-229ENST00000621897 TMEM119Q4V9L6 283 aa5.52□□□□□ -1.53
BRCA1-229ENST00000621897 REPS1Q96D71 796 aa5.52□□□□□ -1.53
BRCA1-229ENST00000621897 MOGAT1Q96PD6 335 aa5.52□□□□□ -1.53
BRCA1-229ENST00000621897 MESP1Q9BRJ9 268 aa5.52□□□□□ -1.53
BRCA1-229ENST00000621897 SHOC2Q9UQ13 582 aa5.52□□□□□ -1.53
BRCA1-229ENST00000621897 TARM1B6A8C7 271 aa5.51□□□□□ -1.53
BRCA1-229ENST00000621897 BTN3A1O00481 513 aa5.51□□□□□ -1.53
BRCA1-229ENST00000621897 CTNND1O60716 968 aaKnown RBP5.51□□□□□ -1.53
BRCA1-229ENST00000621897 THP07101 528 aa5.51□□□□□ -1.53
BRCA1-229ENST00000621897 NHLRC4P0CG21 123 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-229ENST00000621897 ADORA2AP29274 412 aa5.51□□□□□ -1.53
BRCA1-229ENST00000621897 ALDH9A1P49189 494 aa5.51□□□□□ -1.53
BRCA1-229ENST00000621897 ATXN1P54253 815 aaKnown RBP5.51□□□□□ -1.53
BRCA1-229ENST00000621897 SRSF4Q08170 494 aaKnown RBP5.51□□□□□ -1.53
BRCA1-229ENST00000621897 E2F2Q14209 437 aa5.51□□□□□ -1.53
BRCA1-229ENST00000621897 ZNF782Q6ZMW2 699 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-229ENST00000621897 PTF1AQ7RTS3 328 aa5.51□□□□□ -1.53
BRCA1-229ENST00000621897 IL31RAQ8NI17 732 aa5.51□□□□□ -1.53
BRCA1-229ENST00000621897 KBTBD7Q8WVZ9 684 aa5.51□□□□□ -1.53
BRCA1-229ENST00000621897 MAML1Q92585 1016 aa5.51□□□□□ -1.53
BRCA1-229ENST00000621897 R3HDM4Q96D70 268 aa5.51□□□□□ -1.53
BRCA1-229ENST00000621897 DPH1Q9BZG8 443 aa5.51□□□□□ -1.53
BRCA1-229ENST00000621897 SMURF2Q9HAU4 748 aa5.51□□□□□ -1.53
BRCA1-229ENST00000621897 GLOD4Q9HC38 313 aa5.51□□□□□ -1.53
BRCA1-229ENST00000621897 COL3A1P02461 1466 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-229ENST00000621897 A1L4Q6 167 aa5.5□□□□□ -1.53
BRCA1-229ENST00000621897 A6NNZ2 444 aa5.5□□□□□ -1.53
BRCA1-229ENST00000621897 MYO1CO00159 1063 aa5.5□□□□□ -1.53
BRCA1-229ENST00000621897 PHGDHO43175 533 aaKnown RBP5.5□□□□□ -1.53
BRCA1-229ENST00000621897 PRKCGP05129 697 aa5.5□□□□□ -1.53
BRCA1-229ENST00000621897 FAM163BP0C2L3 166 aa5.5□□□□□ -1.53
BRCA1-229ENST00000621897 ENGP17813 658 aa5.5□□□□□ -1.53
BRCA1-229ENST00000621897 LMO1P25800 156 aa5.5□□□□□ -1.53
BRCA1-229ENST00000621897 LRPAP1P30533 357 aa5.5□□□□□ -1.53
BRCA1-229ENST00000621897 WNT3P56703 355 aa5.5□□□□□ -1.53
BRCA1-229ENST00000621897 NFE2Q16621 373 aaPredicted RBP5.5□□□□□ -1.53
BRCA1-229ENST00000621897 FAM102BQ5T8I3 360 aa5.5□□□□□ -1.53
BRCA1-229ENST00000621897 DEPDC1Q5TB30 811 aa5.5□□□□□ -1.53
BRCA1-229ENST00000621897 CXorf57Q6NSI4 855 aaKnown RBP5.5□□□□□ -1.53
BRCA1-229ENST00000621897 CEP85Q6P2H3 762 aa5.5□□□□□ -1.53
BRCA1-229ENST00000621897 ANKRD16Q6P6B7 361 aa5.5□□□□□ -1.53
BRCA1-229ENST00000621897 ZNF783Q6ZMS7 281 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms