RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 METTL5Q9NRN9 209 aaKnown RBP10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 FBXO10Q9UK96 956 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 ZNF609O15014 1411 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 GRID2IPA4D2P6 1211 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 TMEM88BA6NKF7 163 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 VWA5AO00534 786 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 PFDN1O60925 122 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 ERVK-10P10266 1014 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 UCHL3P15374 230 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 RAP1GDS1P52306 607 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 TP53BP2Q13625 1128 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 MAPRE2Q15555 327 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 TMEM259Q4ZIN3 620 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 TEDDM1Q5T9Z0 273 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 RGL4Q8IZJ4 473 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 TSC22D3Q99576 134 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 ECT2Q9H8V3 914 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 L2HGDHQ9H9P8 463 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 KLC4Q9NSK0 619 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 CACNA2D2Q9NY47 1150 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 GPRC5DQ9NZD1 345 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 MEFVO15553 781 aaPredicted RBP10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 FBXO21O94952 628 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 ABCE1P61221 599 aaKnown RBP10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 ACTN3Q08043 901 aaPredicted RBP10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 BOLA3Q53S33 107 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 MAGEB10Q96LZ2 347 aaPredicted RBP10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 CYTH2Q99418 400 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 GAS2L1Q99501 681 aaPredicted RBP10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 CGRRF1Q99675 332 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 COPS7BQ9H9Q2 264 aaPredicted RBP10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 KRT87PA6NCN2 255 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 SUPT3HB4E1H0 165 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 POLE2P56282 527 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 SYCP2LQ5T4T6 812 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 METTL16Q86W50 562 aaKnown RBP10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 HIPK4Q8NE63 616 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 OR9Q1Q8NGQ5 310 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 HES6Q96HZ4 224 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 CEP19Q96LK0 163 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 RNPC3Q96LT9 517 aaKnown RBP10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 IRX2Q9BZI1 471 aaPredicted RBP10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 OSGEPL1Q9H4B0 414 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 XAB2Q9HCS7 855 aaKnown RBP10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 C20orf96Q9NUD7 363 aaPredicted RBP10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 UXTQ9UBK9 157 aaPredicted RBP10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 ZC3H7BQ9UGR2 993 aaKnown RBP10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 FAF1Q9UNN5 650 aaPredicted RBP10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 TRPV2Q9Y5S1 764 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 A0A1B0GTH6 734 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 RHOBTB1O94844 696 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 ENDOD1O94919 500 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 ARP10275 920 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 CSE1LP55060 971 aaKnown RBP10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 GEMIN4P57678 1058 aaKnown RBP10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 MAGOHP61326 146 aaKnown RBP10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 AARS2Q5JTZ9 985 aaKnown RBP10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 BEND6Q5SZJ8 279 aaPredicted RBP10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 UGT3A1Q6NUS8 523 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 DSG4Q86SJ6 1040 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 UNC45BQ8IWX7 931 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 MTMR12Q9C0I1 747 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 PAK5Q9P286 719 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 TRAF3IP3Q9Y228 551 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 VDRP11473 427 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 BRAFP15056 766 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 BCAT1P54687 386 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 FKBP1BP68106 108 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 CUL2Q13617 745 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 VGLL4Q14135 290 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 DHX34Q14147 1143 aaKnown RBP10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 C6orf10Q5SRN2 563 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 MOXD1Q6UVY6 613 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 RASGRP2Q7LDG7 609 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 ZNF438Q7Z4V0 828 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 LINC00523Q86TU6 105 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 SPATA18Q8TC71 538 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 BRD8Q9H0E9 1235 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 NMRK2Q9NPI5 230 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 ADA2Q9NZK5 511 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 NCK2O43639 380 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 ALOX15P16050 662 aaPredicted RBP10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 GRK3P35626 688 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 SREBF1P36956 1147 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 PTGER2P43116 358 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 FBXO47Q5MNV8 452 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 RETSATQ6NUM9 610 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 FAM47EQ6ZV65 393 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 CYFIP2Q96F07 1278 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 GPRC5CQ9NQ84 441 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 ANGPTL2Q9UKU9 493 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 FAM32AQ9Y421 112 aaKnown RBP10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 FOXN1O15353 648 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 PMPCBO75439 489 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 LMNAP02545 664 aaKnown RBP10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 CTNNB1P35222 781 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 CAMK2GQ13555 558 aaPredicted RBP10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 ANKS6Q68DC2 871 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 ADSSL1Q8N142 457 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms