RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 SH2D3AQ9BRG2 576 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 TMEM121Q9BTD3 319 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 GPC6Q9Y625 555 aaPredicted RBP5.24□□□□□ -1.57
VPS13D-214ENST00000620676 FAM86B1E9PN63 330 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 SYNCRIPO60506 623 aaKnown RBP5.24□□□□□ -1.57
VPS13D-214ENST00000620676 TCEA1P23193 301 aaKnown RBP5.24□□□□□ -1.57
VPS13D-214ENST00000620676 HADHQ16836 314 aaKnown RBP5.24□□□□□ -1.57
VPS13D-214ENST00000620676 MTG1Q9BT17 334 aaPredicted RBP5.24□□□□□ -1.57
VPS13D-214ENST00000620676 POLR1BQ9H9Y6 1135 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 A1CFQ9NQ94 594 aaKnown RBP5.24□□□□□ -1.57
VPS13D-214ENST00000620676 CDYLQ9Y232 598 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 RPS6KL1Q9Y6S9 549 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 EPHB6O15197 1021 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 CLOCKO15516 846 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 GABBR2O75899 941 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 APRTP07741 180 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 ADRA1DP25100 572 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 HPCAP84074 193 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 MAPRE1Q15691 268 aaKnown RBP5.24□□□□□ -1.57
VPS13D-214ENST00000620676 KLHL38Q2WGJ6 581 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 C1orf131Q8NDD1 294 aaKnown RBP5.24□□□□□ -1.57
VPS13D-214ENST00000620676 WDR37Q9Y2I8 494 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 GON4LQ3T8J9 2241 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 ADGRL2O95490 1459 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 SNX3O60493 162 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 ADD2P35612 726 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 PSMC6P62333 389 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 ROR1Q01973 937 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 LBRQ14739 615 aaKnown RBP5.24□□□□□ -1.57
VPS13D-214ENST00000620676 SETD3Q86TU7 594 aaPredicted RBP5.24□□□□□ -1.57
VPS13D-214ENST00000620676 ZNF609O15014 1411 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 SNPHO15079 494 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 TNFAIP8O95379 198 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 RPA1P27694 616 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 FAAP100Q0VG06 881 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 OR6B2Q6IFH4 312 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 HORMAD1Q86X24 394 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 TCP10LQ8TDR4 215 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 ATXN2LQ8WWM7 1075 aaKnown RBP5.24□□□□□ -1.57
VPS13D-214ENST00000620676 AGBL1Q96MI9 1066 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 IARS2Q9NSE4 1012 aaKnown RBP5.24□□□□□ -1.57
VPS13D-214ENST00000620676 SLC17A7Q9P2U7 560 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 SRP68Q9UHB9 627 aaKnown RBP5.24□□□□□ -1.57
VPS13D-214ENST00000620676 SLC39A10Q9ULF5 831 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 PDZK1P1A8MUH7 402 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 AMPD2Q01433 879 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 LRRC63Q05C16 580 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 C16orf46Q6P387 395 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 RHOT2Q8IXI1 618 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 PPHLN1Q8NEY8 458 aaKnown RBP5.24□□□□□ -1.57
VPS13D-214ENST00000620676 DQX1Q8TE96 717 aaKnown RBP5.24□□□□□ -1.57
VPS13D-214ENST00000620676 HECW1Q76N89 1606 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 USP17L15C9J2P7 530 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 USP17L13C9JLJ4 530 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 USP17L11C9JVI0 530 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 USP17L18D6R9N7 530 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 USP17L22D6RA61 530 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 USP17L17D6RBQ6 530 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 USP17L19D6RCP7 530 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 USP17L20D6RJB6 530 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 ANGPT2O15123 496 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 OR6B1O95007 311 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 CREB1P16220 341 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 HSPA6P17066 643 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 IFNAR1P17181 557 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 USP17L24Q0WX57 530 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 OGFOD2Q6N063 350 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 TMEM270Q6UE05 265 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 TDRD5Q8NAT2 981 aaKnown RBP5.24□□□□□ -1.57
VPS13D-214ENST00000620676 PNMA1Q8ND90 353 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 STRBPQ96SI9 672 aaKnown RBP5.24□□□□□ -1.57
VPS13D-214ENST00000620676 WBP11Q9Y2W2 641 aaKnown RBP5.24□□□□□ -1.57
VPS13D-214ENST00000620676 DBTP11182 482 aaKnown RBP5.24□□□□□ -1.57
VPS13D-214ENST00000620676 PEX2P28328 305 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 MTA1Q13330 715 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 LACTB2Q53H82 288 aaPredicted RBP5.24□□□□□ -1.57
VPS13D-214ENST00000620676 AGAP3Q96P47 875 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 ST14Q9Y5Y6 855 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 XDHP47989 1333 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 NR5A2O00482 541 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 UNC5CO95185 931 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 PPARGP37231 505 aaPredicted RBP5.24□□□□□ -1.57
VPS13D-214ENST00000620676 GNA12Q03113 381 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 SEMA3AQ14563 771 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 PLCL1Q15111 1095 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 OR8H3Q8N146 312 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 KLHL32Q96NJ5 620 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 NUDT12Q9BQG2 462 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 OLA1Q9NTK5 396 aaKnown RBP5.24□□□□□ -1.57
VPS13D-214ENST00000620676 KRT20P35900 424 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 RXRGP48443 463 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 COG2Q14746 738 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 PDXDC2PQ6P474 469 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 RAB44Q7Z6P3 723 aaPredicted RBP5.24□□□□□ -1.57
VPS13D-214ENST00000620676 SLC44A5Q8NCS7 719 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 TTC25Q96NG3 672 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 ADPGKQ9BRR6 497 aa5.24□□□□□ -1.57
VPS13D-214ENST00000620676 LYPLA1O75608 230 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-214ENST00000620676 KRT38O76015 456 aa5.23□□□□□ -1.57
VPS13D-214ENST00000620676 TTLL1O95922 423 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms