RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 APOBEC3GQ9HC16 384 aaKnown RBP9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 SLC40A1Q9NP59 571 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 CTNNAL1Q9UBT7 734 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 CHMP2BQ9UQN3 213 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 AFG3L2Q9Y4W6 797 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 APOL1O14791 398 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 APRTP07741 180 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 GJB1P08034 283 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 VDRP11473 427 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 RFC1P35251 1148 aaPredicted RBP9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 MAP3K10Q02779 954 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 PLEKHA7Q6IQ23 1121 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 ZDHHC24Q6UX98 284 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 ARMCX2Q7L311 632 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 PRUNE1Q86TP1 453 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 CEP120Q8N960 986 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 COPS5Q92905 334 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 STMN2Q93045 179 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 ECT2Q9H8V3 914 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 DPP3Q9NY33 737 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 TTLL3Q9Y4R7 772 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 ZNF541Q9H0D2 1346 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 A0A0G2JND7 137 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 CFAP73A6NFT4 308 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 COPEO14579 308 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 HUS1O60921 280 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 CYP1A1P04798 512 aaPredicted RBP9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 SCTRP47872 440 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 PDE1BQ01064 536 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 ENPEPQ07075 957 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 DNAJC3Q13217 504 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 ITIH4Q14624 930 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 GPR162Q16538 588 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 CFAP157Q5JU67 520 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 YTHDF3Q7Z739 585 aaKnown RBP9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 SIX6OS1Q8N1H7 587 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 PAF1Q8N7H5 531 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 SLITRK1Q96PX8 696 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 AP5M1Q9H0R1 490 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 ETNK1Q9HBU6 452 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 PCDH9Q9HC56 1237 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 DCTN4Q9UJW0 460 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 USP18Q9UMW8 372 aa9.66□□□□□ -0.86
RBFOX1-223ENST00000620507 STIP1P31948 543 aaKnown RBP9.65□□□□□ -0.86
RBFOX1-223ENST00000620507 MMP13P45452 471 aa9.65□□□□□ -0.86
RBFOX1-223ENST00000620507 NAA25Q14CX7 972 aa9.65□□□□□ -0.86
RBFOX1-223ENST00000620507 CYP1B1Q16678 543 aa9.65□□□□□ -0.86
RBFOX1-223ENST00000620507 LRRC38Q5VT99 294 aa9.65□□□□□ -0.86
RBFOX1-223ENST00000620507 ZNF354CQ86Y25 554 aa9.65□□□□□ -0.86
RBFOX1-223ENST00000620507 OR6J1Q8NGC5 347 aa9.65□□□□□ -0.86
RBFOX1-223ENST00000620507 AFG1LQ8WV93 481 aa9.65□□□□□ -0.86
RBFOX1-223ENST00000620507 DDX27Q96GQ7 796 aaKnown RBP9.65□□□□□ -0.86
RBFOX1-223ENST00000620507 TRIM55Q9BYV6 548 aa9.65□□□□□ -0.86
RBFOX1-223ENST00000620507 TMEM191CA6NGB0 347 aa9.65□□□□□ -0.86
RBFOX1-223ENST00000620507 LACTBL1A8MY62 500 aa9.65□□□□□ -0.86
RBFOX1-223ENST00000620507 LPXNO60711 386 aa9.65□□□□□ -0.86
RBFOX1-223ENST00000620507 GEMIN4P57678 1058 aaKnown RBP9.65□□□□□ -0.86
RBFOX1-223ENST00000620507 GRM1Q13255 1194 aa9.65□□□□□ -0.86
RBFOX1-223ENST00000620507 PLCB4Q15147 1175 aa9.65□□□□□ -0.86
RBFOX1-223ENST00000620507 HEATR6Q6AI08 1181 aaKnown RBP9.65□□□□□ -0.86
RBFOX1-223ENST00000620507 DPY19L2P1Q6NXN4 242 aa9.65□□□□□ -0.86
RBFOX1-223ENST00000620507 DENND1BQ6P3S1 775 aa9.65□□□□□ -0.86
RBFOX1-223ENST00000620507 BZW1Q7L1Q6 419 aaKnown RBP9.65□□□□□ -0.86
RBFOX1-223ENST00000620507 EXOC3L1Q86VI1 746 aa9.65□□□□□ -0.86
RBFOX1-223ENST00000620507 ZCCHC9Q8N567 271 aaKnown RBP9.65□□□□□ -0.86
RBFOX1-223ENST00000620507 C12orf50Q8NA57 414 aaPredicted RBP9.65□□□□□ -0.86
RBFOX1-223ENST00000620507 OPTNQ96CV9 577 aa9.65□□□□□ -0.86
RBFOX1-223ENST00000620507 CYP3A43Q9HB55 503 aa9.65□□□□□ -0.86
RBFOX1-223ENST00000620507 BTBD7Q9P203 1132 aa9.65□□□□□ -0.86
RBFOX1-223ENST00000620507 SAE1Q9UBE0 346 aaPredicted RBP9.65□□□□□ -0.86
RBFOX1-223ENST00000620507 SHOC2Q9UQ13 582 aa9.65□□□□□ -0.86
RBFOX1-223ENST00000620507 SMAPO00193 183 aa9.65□□□□□ -0.87
RBFOX1-223ENST00000620507 B4GALT5O43286 388 aa9.65□□□□□ -0.87
RBFOX1-223ENST00000620507 LIASO43766 372 aa9.65□□□□□ -0.87
RBFOX1-223ENST00000620507 KRT38O76015 456 aa9.65□□□□□ -0.87
RBFOX1-223ENST00000620507 VNN1O95497 513 aa9.65□□□□□ -0.87
RBFOX1-223ENST00000620507 PDGFRBP09619 1106 aa9.65□□□□□ -0.87
RBFOX1-223ENST00000620507 LCP1P13796 627 aa9.65□□□□□ -0.87
RBFOX1-223ENST00000620507 KRT4P19013 534 aa9.65□□□□□ -0.87
RBFOX1-223ENST00000620507 BOLA3Q53S33 107 aa9.65□□□□□ -0.87
RBFOX1-223ENST00000620507 EEF1DP3Q658K8 133 aa9.65□□□□□ -0.87
RBFOX1-223ENST00000620507 ARHGAP24Q8N264 748 aa9.65□□□□□ -0.87
RBFOX1-223ENST00000620507 KLF6Q99612 283 aaPredicted RBP9.65□□□□□ -0.87
RBFOX1-223ENST00000620507 SYT11Q9BT88 431 aa9.65□□□□□ -0.87
RBFOX1-223ENST00000620507 KDM4CQ9H3R0 1056 aa9.65□□□□□ -0.87
RBFOX1-223ENST00000620507 ASB7Q9H672 318 aa9.65□□□□□ -0.87
RBFOX1-223ENST00000620507 ALG13Q9NP73 1137 aaKnown RBP9.65□□□□□ -0.87
RBFOX1-223ENST00000620507 SLC12A6Q9UHW9 1150 aa9.65□□□□□ -0.87
RBFOX1-223ENST00000620507 GGA2Q9UJY4 613 aa9.65□□□□□ -0.87
RBFOX1-223ENST00000620507 UBR3Q6ZT12 1888 aa9.64□□□□□ -0.87
RBFOX1-223ENST00000620507 H0YGN5 161 aa9.64□□□□□ -0.87
RBFOX1-223ENST00000620507 H3BRB1 525 aa9.64□□□□□ -0.87
RBFOX1-223ENST00000620507 DYNC1LI2O43237 492 aaPredicted RBP9.64□□□□□ -0.87
RBFOX1-223ENST00000620507 USP2O75604 605 aaPredicted RBP9.64□□□□□ -0.87
RBFOX1-223ENST00000620507 RGS20O76081 388 aa9.64□□□□□ -0.87
RBFOX1-223ENST00000620507 PAEPP09466 180 aa9.64□□□□□ -0.87
RBFOX1-223ENST00000620507 MCF2P10911 925 aa9.64□□□□□ -0.87
RBFOX1-223ENST00000620507 ETS1P14921 441 aa9.64□□□□□ -0.87
RBFOX1-223ENST00000620507 KCNA3P22001 575 aa9.64□□□□□ -0.87
RBFOX1-223ENST00000620507 ECHS1P30084 290 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms