RNA–Protein interactions for RNA: ENST00000619117.1

C9orf50-202, Transcript of chromosome 9 open reading frame 50, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf50, Length 796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50-202ENST00000619117 ADAM9Q13443 819 aa16.3■□□□□ 0.2
C9orf50-202ENST00000619117 MLF2Q15773 248 aaPredicted RBP16.3■□□□□ 0.2
C9orf50-202ENST00000619117 ZNF667Q5HYK9 610 aa16.3■□□□□ 0.2
C9orf50-202ENST00000619117 GPR158Q5T848 1215 aa16.3■□□□□ 0.2
C9orf50-202ENST00000619117 VSTM1Q6UX27 236 aa16.3■□□□□ 0.2
C9orf50-202ENST00000619117 OR6B3Q8NGW1 331 aa16.3■□□□□ 0.2
C9orf50-202ENST00000619117 MYCBPAPQ8TBZ2 947 aa16.3■□□□□ 0.2
C9orf50-202ENST00000619117 TRMT2BQ96GJ1 504 aaKnown RBP16.3■□□□□ 0.2
C9orf50-202ENST00000619117 CEP295NLQ96MC4 621 aa16.3■□□□□ 0.2
C9orf50-202ENST00000619117 DDX23Q9BUQ8 820 aaKnown RBP16.3■□□□□ 0.2
C9orf50-202ENST00000619117 TRMT61BQ9BVS5 477 aaKnown RBP16.3■□□□□ 0.2
C9orf50-202ENST00000619117 TASP1Q9H6P5 420 aa16.3■□□□□ 0.2
C9orf50-202ENST00000619117 SMYD3Q9H7B4 428 aa16.3■□□□□ 0.2
C9orf50-202ENST00000619117 ASS1P00966 412 aaKnown RBP16.29■□□□□ 0.2
C9orf50-202ENST00000619117 F11P03951 625 aa16.29■□□□□ 0.2
C9orf50-202ENST00000619117 PSMC3P17980 439 aa16.29■□□□□ 0.2
C9orf50-202ENST00000619117 RFX1P22670 979 aa16.29■□□□□ 0.2
C9orf50-202ENST00000619117 VIPR2P41587 438 aa16.29■□□□□ 0.2
C9orf50-202ENST00000619117 PIK3CAP42336 1068 aa16.29■□□□□ 0.2
C9orf50-202ENST00000619117 NLRP12P59046 1061 aa16.29■□□□□ 0.2
C9orf50-202ENST00000619117 CYP4F8P98187 520 aa16.29■□□□□ 0.2
C9orf50-202ENST00000619117 NHLH1Q02575 133 aa16.29■□□□□ 0.2
C9orf50-202ENST00000619117 TCF15Q12870 199 aa16.29■□□□□ 0.2
C9orf50-202ENST00000619117 GRM2Q14416 872 aa16.29■□□□□ 0.2
C9orf50-202ENST00000619117 DDR2Q16832 855 aa16.29■□□□□ 0.2
C9orf50-202ENST00000619117 SGSM1Q2NKQ1 1148 aa16.29■□□□□ 0.2
C9orf50-202ENST00000619117 SLC44A4Q53GD3 710 aa16.29■□□□□ 0.2
C9orf50-202ENST00000619117 SDHAF4Q5VUM1 108 aa16.29■□□□□ 0.2
C9orf50-202ENST00000619117 TMEM150AQ86TG1 271 aa16.29■□□□□ 0.2
C9orf50-202ENST00000619117 ZC3H3Q8IXZ2 948 aaKnown RBP16.29■□□□□ 0.2
C9orf50-202ENST00000619117 ERCC4Q92889 916 aaPredicted RBP16.29■□□□□ 0.2
C9orf50-202ENST00000619117 PCED1BQ96HM7 432 aa16.29■□□□□ 0.2
C9orf50-202ENST00000619117 MYRFLQ96LU7 910 aa16.29■□□□□ 0.2
C9orf50-202ENST00000619117 TRPV5Q9NQA5 729 aa16.29■□□□□ 0.2
C9orf50-202ENST00000619117 OBP2AQ9NY56 170 aa16.29■□□□□ 0.2
C9orf50-202ENST00000619117 CHMP5Q9NZZ3 219 aa16.29■□□□□ 0.2
C9orf50-202ENST00000619117 MAGEC2Q9UBF1 373 aaPredicted RBP16.29■□□□□ 0.2
C9orf50-202ENST00000619117 UXTQ9UBK9 157 aaPredicted RBP16.29■□□□□ 0.2
C9orf50-202ENST00000619117 SLC38A8A6NNN8 435 aa16.28■□□□□ 0.2
C9orf50-202ENST00000619117 SOBPA7XYQ1 873 aa16.28■□□□□ 0.2
C9orf50-202ENST00000619117 HEPACAM2A8MVW5 462 aa16.28■□□□□ 0.2
C9orf50-202ENST00000619117 PI15O43692 258 aa16.28■□□□□ 0.2
C9orf50-202ENST00000619117 HLA-DRAP01903 254 aa16.28■□□□□ 0.2
C9orf50-202ENST00000619117 TRIM49P0CI25 452 aa16.28■□□□□ 0.2
C9orf50-202ENST00000619117 TRIM49CP0CI26 452 aa16.28■□□□□ 0.2
C9orf50-202ENST00000619117 P4HA1P13674 534 aa16.28■□□□□ 0.2
C9orf50-202ENST00000619117 PTPN1P18031 435 aaKnown RBP16.28■□□□□ 0.2
C9orf50-202ENST00000619117 DDX6P26196 483 aaKnown RBP eCLIP16.28■□□□□ 0.2
C9orf50-202ENST00000619117 MDH1BQ5I0G3 518 aa16.28■□□□□ 0.2
C9orf50-202ENST00000619117 SCARA5Q6ZMJ2 495 aa16.28■□□□□ 0.2
C9orf50-202ENST00000619117 ARID3BQ8IVW6 561 aaPredicted RBP16.28■□□□□ 0.2
C9orf50-202ENST00000619117 MFSD6LQ8IWD5 586 aa16.28■□□□□ 0.2
C9orf50-202ENST00000619117 SCN4BQ8IWT1 228 aa16.28■□□□□ 0.2
C9orf50-202ENST00000619117 CCDC105Q8IYK2 499 aa16.28■□□□□ 0.2
C9orf50-202ENST00000619117 ADSSL1Q8N142 457 aa16.28■□□□□ 0.2
C9orf50-202ENST00000619117 STKLD1Q8NE28 680 aa16.28■□□□□ 0.2
C9orf50-202ENST00000619117 RSPRY1Q96DX4 576 aa16.28■□□□□ 0.2
C9orf50-202ENST00000619117 SPATA17Q96L03 361 aa16.28■□□□□ 0.2
C9orf50-202ENST00000619117 TSG101Q99816 390 aa16.28■□□□□ 0.2
C9orf50-202ENST00000619117 SDCBP2Q9H190 292 aa16.28■□□□□ 0.2
C9orf50-202ENST00000619117 BRD9Q9H8M2 597 aa16.28■□□□□ 0.2
C9orf50-202ENST00000619117 CACNA1HO95180 2353 aa16.27■□□□□ 0.2
C9orf50-202ENST00000619117 A8MXQ7 604 aa16.27■□□□□ 0.2
C9orf50-202ENST00000619117 STK25O00506 426 aa16.27■□□□□ 0.2
C9orf50-202ENST00000619117 CETN3O15182 167 aa16.27■□□□□ 0.2
C9orf50-202ENST00000619117 SLC16A3O15427 465 aaKnown RBP16.27■□□□□ 0.2
C9orf50-202ENST00000619117 GADD45BO75293 160 aaPredicted RBP16.27■□□□□ 0.2
C9orf50-202ENST00000619117 TADA3O75528 432 aa16.27■□□□□ 0.2
C9orf50-202ENST00000619117 CLSTN1O94985 981 aa16.27■□□□□ 0.2
C9orf50-202ENST00000619117 PRAMEF12O95522 483 aa16.27■□□□□ 0.2
C9orf50-202ENST00000619117 EPB41P11171 864 aaKnown RBP16.27■□□□□ 0.2
C9orf50-202ENST00000619117 BDNFP23560 247 aa16.27■□□□□ 0.2
C9orf50-202ENST00000619117 GTF2H1P32780 548 aa16.27■□□□□ 0.2
C9orf50-202ENST00000619117 GCLMP48507 274 aa16.27■□□□□ 0.2
C9orf50-202ENST00000619117 CYP27A1Q02318 531 aa16.27■□□□□ 0.2
C9orf50-202ENST00000619117 LRRC63Q05C16 580 aa16.27■□□□□ 0.2
C9orf50-202ENST00000619117 PPP3CAQ08209 521 aa16.27■□□□□ 0.2
C9orf50-202ENST00000619117 FCHO2Q0JRZ9 810 aa16.27■□□□□ 0.2
C9orf50-202ENST00000619117 B3GALNT2Q8NCR0 500 aa16.27■□□□□ 0.2
C9orf50-202ENST00000619117 PJA1Q8NG27 643 aa16.27■□□□□ 0.2
C9orf50-202ENST00000619117 IRF7Q92985 503 aa16.27■□□□□ 0.2
C9orf50-202ENST00000619117 IRF2BPLQ9H1B7 796 aa16.27■□□□□ 0.2
C9orf50-202ENST00000619117 DPEP3Q9H4B8 488 aa16.27■□□□□ 0.2
C9orf50-202ENST00000619117 TMEM8AQ9HCN3 771 aa16.27■□□□□ 0.2
C9orf50-202ENST00000619117 MAN1B1Q9UKM7 699 aa16.27■□□□□ 0.2
C9orf50-202ENST00000619117 MAGED2Q9UNF1 606 aaPredicted RBP16.27■□□□□ 0.2
C9orf50-202ENST00000619117 COL4A2P08572 1712 aa16.26■□□□□ 0.19
C9orf50-202ENST00000619117 KANSL1LA0AUZ9 987 aa16.26■□□□□ 0.19
C9orf50-202ENST00000619117 ARNTLO00327 626 aa16.26■□□□□ 0.19
C9orf50-202ENST00000619117 TRIM66O15016 1216 aa16.26■□□□□ 0.19
C9orf50-202ENST00000619117 GDI1P31150 447 aa16.26■□□□□ 0.19
C9orf50-202ENST00000619117 ANP32AP39687 249 aaKnown RBP16.26■□□□□ 0.19
C9orf50-202ENST00000619117 PPP1R2P41236 205 aa16.26■□□□□ 0.19
C9orf50-202ENST00000619117 ASPAP45381 313 aa16.26■□□□□ 0.19
C9orf50-202ENST00000619117 RAP1GAPP47736 663 aa16.26■□□□□ 0.19
C9orf50-202ENST00000619117 PMS1P54277 932 aaKnown RBP16.26■□□□□ 0.19
C9orf50-202ENST00000619117 CDH8P55286 799 aa16.26■□□□□ 0.19
C9orf50-202ENST00000619117 FKBP3Q00688 224 aaKnown RBP16.26■□□□□ 0.19
C9orf50-202ENST00000619117 TPRG1Q6ZUI0 275 aa16.26■□□□□ 0.19
C9orf50-202ENST00000619117 CMTM8Q8IZV2 173 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms