RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 TJP3O95049 919 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 PSAPP07602 524 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 EPHX2P34913 555 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 IREB2P48200 963 aaKnown RBP5.84□□□□□ -1.47
CPNE4-214ENST00000617767 LIG4P49917 911 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 MXI1P50539 228 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 RNASELQ05823 741 aaKnown RBP5.84□□□□□ -1.47
CPNE4-214ENST00000617767 HLTFQ14527 1009 aaKnown RBP eCLIP5.84□□□□□ -1.47
CPNE4-214ENST00000617767 ASTE1Q2TB18 679 aaPredicted RBP5.84□□□□□ -1.47
CPNE4-214ENST00000617767 FAM182AQ5T1J6 154 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 CHADLQ6NUI6 762 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 SLC47A2Q86VL8 602 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 RIBC1Q8N443 379 aaPredicted RBP5.84□□□□□ -1.47
CPNE4-214ENST00000617767 ARFGAP2Q8N6H7 521 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 TMEM161BQ8NDZ6 487 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 STKLD1Q8NE28 680 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 CEP70Q8NHQ1 597 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 LNX1Q8TBB1 728 aaPredicted RBP5.84□□□□□ -1.47
CPNE4-214ENST00000617767 ASAP3Q8TDY4 903 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 SKA1Q96BD8 255 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 NLRP4Q96MN2 994 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 TLR10Q9BXR5 811 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 CLK4Q9HAZ1 481 aaKnown RBP5.84□□□□□ -1.47
CPNE4-214ENST00000617767 PDP2Q9P2J9 529 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 IP6K2Q9UHH9 426 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 ZNF112Q9UJU3 913 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 KAT6AQ92794 2004 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 LOC105371267A0A1B0GV96 52 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 GRID2IPA4D2P6 1211 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 TNFRSF10AO00220 468 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 EIF3DO15371 548 aaKnown RBP eCLIP5.84□□□□□ -1.47
CPNE4-214ENST00000617767 TMCC2O75069 709 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 SGPL1O95470 568 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 EDN1P05305 212 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 RARAP10276 462 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 VAV1P15498 845 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 TNFAIP3P21580 790 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 CALB2P22676 271 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 ATICP31939 592 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 CHKAP35790 457 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 GJC1P36383 396 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 JAK3P52333 1124 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 ZNF131P52739 623 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 GALCP54803 685 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 RTP1P59025 263 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 NLRP11P59045 1033 aaKnown RBP5.84□□□□□ -1.47
CPNE4-214ENST00000617767 EMC2Q15006 297 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 SLC39A4Q6P5W5 647 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 DPH6Q7L8W6 267 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 TRPM8Q7Z2W7 1104 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 VPS52Q8N1B4 723 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 SPERTQ8NA61 448 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 ARHGEF26Q96DR7 871 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 INPP4AQ96PE3 977 aaPredicted RBP5.84□□□□□ -1.47
CPNE4-214ENST00000617767 PPP1R10Q96QC0 940 aaKnown RBP5.84□□□□□ -1.47
CPNE4-214ENST00000617767 XPO6Q96QU8 1125 aaKnown RBP5.84□□□□□ -1.47
CPNE4-214ENST00000617767 KRT12Q99456 494 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 TMEM117Q9H0C3 514 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 THAP2Q9H0W7 228 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 APEX2Q9UBZ4 518 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 SNX12Q9UMY4 172 aa5.84□□□□□ -1.47
CPNE4-214ENST00000617767 ZNFX1Q9P2E3 1918 aaKnown RBP5.84□□□□□ -1.48
CPNE4-214ENST00000617767 KANSL1LA0AUZ9 987 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 CYP2C9P11712 490 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 CES1P23141 567 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 PTDSS1P48651 473 aaKnown RBP5.83□□□□□ -1.48
CPNE4-214ENST00000617767 EPHB4P54760 987 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 TSPY1Q01534 308 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 ORC1Q13415 861 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 BMT2Q1RMZ1 405 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 CTC1Q2NKJ3 1217 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 LIN52Q52LA3 116 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 PDCD4Q53EL6 469 aaKnown RBP5.83□□□□□ -1.48
CPNE4-214ENST00000617767 SPDYCQ5MJ68 293 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 SCARA5Q6ZMJ2 495 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 IFNLR1Q8IU57 520 aaPredicted RBP5.83□□□□□ -1.48
CPNE4-214ENST00000617767 RHPN2Q8IUC4 686 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 CREG2Q8IUH2 290 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 C4orf19Q8IY42 314 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 IFT74Q96LB3 600 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 PHF12Q96QT6 1004 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 PRPF18Q99633 342 aaKnown RBP5.83□□□□□ -1.48
CPNE4-214ENST00000617767 B3GNT4Q9C0J1 378 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 RNPEPL1Q9HAU8 725 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 FAIMQ9NVQ4 179 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 CTTNBP2NLQ9P2B4 639 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 FBXO40Q9UH90 709 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 GPC6Q9Y625 555 aaPredicted RBP5.83□□□□□ -1.48
CPNE4-214ENST00000617767 IKBKGQ9Y6K9 419 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 TLL2Q9Y6L7 1015 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 PARP14Q460N5 1801 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 HMGB1P1B2RPK0 211 aaPredicted RBP5.83□□□□□ -1.48
CPNE4-214ENST00000617767 RASA4BC9J798 803 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 MAP3K7O43318 606 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 RASA4O43374 803 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 ADAM23O75077 832 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 TPBGLP0DKB5 382 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 CD58P19256 250 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 SOX5P35711 763 aa5.83□□□□□ -1.48
CPNE4-214ENST00000617767 CETN2P41208 172 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms