RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 RIN3Q8TB24 985 aa23.82■■□□□ 1.4
NEDD4L-237ENST00000617539 BPIFB1Q8TDL5 484 aa23.82■■□□□ 1.4
NEDD4L-237ENST00000617539 CSGALNACT1Q8TDX6 532 aa23.82■■□□□ 1.4
NEDD4L-237ENST00000617539 ZNF516Q92618 1163 aa23.82■■□□□ 1.4
NEDD4L-237ENST00000617539 CGRRF1Q99675 332 aa23.82■■□□□ 1.4
NEDD4L-237ENST00000617539 GTSE1Q9NYZ3 720 aa23.82■■□□□ 1.4
NEDD4L-237ENST00000617539 CCL26Q9Y258 94 aa23.82■■□□□ 1.4
NEDD4L-237ENST00000617539 NME7Q9Y5B8 376 aa23.82■■□□□ 1.4
NEDD4L-237ENST00000617539 DPYSL4O14531 572 aa23.81■■□□□ 1.4
NEDD4L-237ENST00000617539 NOL4O94818 638 aa23.81■■□□□ 1.4
NEDD4L-237ENST00000617539 SLFN14P0C7P3 912 aa23.81■■□□□ 1.4
NEDD4L-237ENST00000617539 CSH1P0DML2 217 aa23.81■■□□□ 1.4
NEDD4L-237ENST00000617539 CSH2P0DML3 217 aa23.81■■□□□ 1.4
NEDD4L-237ENST00000617539 TDGF1P13385 188 aa23.81■■□□□ 1.4
NEDD4L-237ENST00000617539 PCSK1P29120 753 aa23.81■■□□□ 1.4
NEDD4L-237ENST00000617539 PSMC1P62191 440 aaKnown RBP23.81■■□□□ 1.4
NEDD4L-237ENST00000617539 SNRPFP62306 86 aaKnown RBP23.81■■□□□ 1.4
NEDD4L-237ENST00000617539 TNK2Q07912 1038 aa23.81■■□□□ 1.4
NEDD4L-237ENST00000617539 ARHGAP29Q52LW3 1261 aa23.81■■□□□ 1.4
NEDD4L-237ENST00000617539 C12orf56Q8IXR9 622 aa23.81■■□□□ 1.4
NEDD4L-237ENST00000617539 MAB21L3Q8N8X9 362 aa23.81■■□□□ 1.4
NEDD4L-237ENST00000617539 TTC8Q8TAM2 541 aa23.81■■□□□ 1.4
NEDD4L-237ENST00000617539 PLEKHO2Q8TD55 490 aa23.81■■□□□ 1.4
NEDD4L-237ENST00000617539 CCDC127Q96BQ5 260 aa23.81■■□□□ 1.4
NEDD4L-237ENST00000617539 LMAN1LQ9HAT1 526 aa23.81■■□□□ 1.4
NEDD4L-237ENST00000617539 CRTAC1Q9NQ79 661 aa23.81■■□□□ 1.4
NEDD4L-237ENST00000617539 MAGED2Q9UNF1 606 aaPredicted RBP23.81■■□□□ 1.4
NEDD4L-237ENST00000617539 SPECC1L-ADORA2AF8WAN1 911 aa23.8■■□□□ 1.4
NEDD4L-237ENST00000617539 CTHP32929 405 aa23.8■■□□□ 1.4
NEDD4L-237ENST00000617539 RPL10AP62906 217 aaKnown RBP23.8■■□□□ 1.4
NEDD4L-237ENST00000617539 GAS6Q14393 721 aa23.8■■□□□ 1.4
NEDD4L-237ENST00000617539 KNOP1Q1ED39 458 aaKnown RBP23.8■■□□□ 1.4
NEDD4L-237ENST00000617539 TXNDC8Q6A555 127 aa23.8■■□□□ 1.4
NEDD4L-237ENST00000617539 HS2ST1Q7LGA3 356 aa23.8■■□□□ 1.4
NEDD4L-237ENST00000617539 CEP57L1Q8IYX8 460 aa23.8■■□□□ 1.4
NEDD4L-237ENST00000617539 SUMF1Q8NBK3 374 aa23.8■■□□□ 1.4
NEDD4L-237ENST00000617539 ZBTB44Q8NCP5 570 aa23.8■■□□□ 1.4
NEDD4L-237ENST00000617539 KIAA0895Q8NCT3 520 aa23.8■■□□□ 1.4
NEDD4L-237ENST00000617539 USP13Q92995 863 aaPredicted RBP23.8■■□□□ 1.4
NEDD4L-237ENST00000617539 TRMT2BQ96GJ1 504 aaKnown RBP23.8■■□□□ 1.4
NEDD4L-237ENST00000617539 PAGE5Q96GU1 130 aa23.8■■□□□ 1.4
NEDD4L-237ENST00000617539 FUBP3Q96I24 572 aaKnown RBP eCLIP23.8■■□□□ 1.4
NEDD4L-237ENST00000617539 MYRFLQ96LU7 910 aa23.8■■□□□ 1.4
NEDD4L-237ENST00000617539 SYT15Q9BQS2 421 aa23.8■■□□□ 1.4
NEDD4L-237ENST00000617539 GPR179Q6PRD1 2367 aa23.79■■□□□ 1.4
NEDD4L-237ENST00000617539 A0A1B0GVL5 298 aa23.79■■□□□ 1.4
NEDD4L-237ENST00000617539 PFKFB1P16118 471 aa23.79■■□□□ 1.4
NEDD4L-237ENST00000617539 TNNI1P19237 187 aa23.79■■□□□ 1.4
NEDD4L-237ENST00000617539 WARSP23381 471 aaKnown RBP23.79■■□□□ 1.4
NEDD4L-237ENST00000617539 KPNA1P52294 538 aaPredicted RBP23.79■■□□□ 1.4
NEDD4L-237ENST00000617539 STK4Q13043 487 aa23.79■■□□□ 1.4
NEDD4L-237ENST00000617539 SPATA2LQ8IUW3 424 aaPredicted RBP23.79■■□□□ 1.4
NEDD4L-237ENST00000617539 CELF5Q8N6W0 485 aaKnown RBP23.79■■□□□ 1.4
NEDD4L-237ENST00000617539 MSANTD3Q96H12 275 aa23.79■■□□□ 1.4
NEDD4L-237ENST00000617539 MRPL45Q9BRJ2 306 aaKnown RBP23.79■■□□□ 1.4
NEDD4L-237ENST00000617539 C8orf33Q9H7E9 229 aaPredicted RBP23.79■■□□□ 1.4
NEDD4L-237ENST00000617539 RBM12Q9NTZ6 932 aaKnown RBP23.79■■□□□ 1.4
NEDD4L-237ENST00000617539 CDH9Q9ULB4 789 aa23.79■■□□□ 1.4
NEDD4L-237ENST00000617539 HPSEQ9Y251 543 aa23.79■■□□□ 1.4
NEDD4L-237ENST00000617539 R3HCC1Q9Y3T6 440 aaKnown RBP23.79■■□□□ 1.4
NEDD4L-237ENST00000617539 PCDHGA2Q9Y5H1 932 aa23.79■■□□□ 1.4
NEDD4L-237ENST00000617539 HELZP42694 1942 aaKnown RBP23.78■■□□□ 1.4
NEDD4L-237ENST00000617539 KINO60870 393 aaKnown RBP23.78■■□□□ 1.4
NEDD4L-237ENST00000617539 DDX6P26196 483 aaKnown RBP eCLIP23.78■■□□□ 1.43e-7■■■■■ 31.2
NEDD4L-237ENST00000617539 MAGEA11P43364 429 aa23.78■■□□□ 1.4
NEDD4L-237ENST00000617539 CASP4P49662 377 aa23.78■■□□□ 1.4
NEDD4L-237ENST00000617539 MAMSTRQ6ZN01 415 aa23.78■■□□□ 1.4
NEDD4L-237ENST00000617539 MON1AQ86VX9 555 aa23.78■■□□□ 1.4
NEDD4L-237ENST00000617539 RALGPS2Q86X27 583 aaPredicted RBP23.78■■□□□ 1.4
NEDD4L-237ENST00000617539 MYLPFQ96A32 169 aa23.78■■□□□ 1.4
NEDD4L-237ENST00000617539 FNBP1Q96RU3 617 aa23.78■■□□□ 1.4
NEDD4L-237ENST00000617539 ZSCAN32Q9NX65 697 aa23.78■■□□□ 1.4
NEDD4L-237ENST00000617539 CGNQ9P2M7 1197 aaKnown RBP23.78■■□□□ 1.4
NEDD4L-237ENST00000617539 ZMYM5Q9UJ78 669 aa23.78■■□□□ 1.4
NEDD4L-237ENST00000617539 LILRB5O75023 590 aa23.77■■□□□ 1.4
NEDD4L-237ENST00000617539 PDGFRBP09619 1106 aa23.77■■□□□ 1.4
NEDD4L-237ENST00000617539 CMA1P23946 247 aa23.77■■□□□ 1.4
NEDD4L-237ENST00000617539 AVPR1AP37288 418 aa23.77■■□□□ 1.4
NEDD4L-237ENST00000617539 PLCB2Q00722 1185 aa23.77■■□□□ 1.4
NEDD4L-237ENST00000617539 KMT5BQ4FZB7 885 aa23.77■■□□□ 1.4
NEDD4L-237ENST00000617539 SCN4BQ8IWT1 228 aa23.77■■□□□ 1.4
NEDD4L-237ENST00000617539 MRPS31Q92665 395 aaKnown RBP23.77■■□□□ 1.4
NEDD4L-237ENST00000617539 CHFRQ96EP1 664 aa23.77■■□□□ 1.4
NEDD4L-237ENST00000617539 SLC22A12Q96S37 553 aa23.77■■□□□ 1.4
NEDD4L-237ENST00000617539 MMS19Q96T76 1030 aa23.77■■□□□ 1.4
NEDD4L-237ENST00000617539 FAM83CQ9BQN1 747 aa23.77■■□□□ 1.4
NEDD4L-237ENST00000617539 IER2Q9BTL4 223 aa23.77■■□□□ 1.4
NEDD4L-237ENST00000617539 XYLT2Q9H1B5 865 aa23.77■■□□□ 1.4
NEDD4L-237ENST00000617539 HPS4Q9NQG7 708 aa23.77■■□□□ 1.4
NEDD4L-237ENST00000617539 TDP1Q9NUW8 608 aa23.77■■□□□ 1.4
NEDD4L-237ENST00000617539 GTF3C3Q9Y5Q9 886 aa23.77■■□□□ 1.4
NEDD4L-237ENST00000617539 OTOL1A6NHN0 477 aaPredicted RBP23.76■■□□□ 1.39
NEDD4L-237ENST00000617539 C1orf228Q6PIY5 440 aa23.76■■□□□ 1.39
NEDD4L-237ENST00000617539 Q6ZS52 159 aa23.76■■□□□ 1.39
NEDD4L-237ENST00000617539 PCED1BQ96HM7 432 aa23.76■■□□□ 1.39
NEDD4L-237ENST00000617539 KCTD10Q9H3F6 313 aa23.76■■□□□ 1.39
NEDD4L-237ENST00000617539 GKN1Q9NS71 199 aa23.76■■□□□ 1.39
NEDD4L-237ENST00000617539 DMAC2Q9NW81 257 aa23.76■■□□□ 1.39
NEDD4L-237ENST00000617539 UXTQ9UBK9 157 aaPredicted RBP23.76■■□□□ 1.39
NEDD4L-237ENST00000617539 SOBPA7XYQ1 873 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms