RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 CCDC142Q17RM4 750 aa21.78■■□□□ 1.08
CNTNAP3B-212ENST00000617422 GOLGA7BQ2TAP0 167 aa21.78■■□□□ 1.08
CNTNAP3B-212ENST00000617422 PKDCCQ504Y2 493 aa21.78■■□□□ 1.08
CNTNAP3B-212ENST00000617422 CCNI2Q6ZMN8 369 aaPredicted RBP21.78■■□□□ 1.08
CNTNAP3B-212ENST00000617422 OSTM1Q86WC4 334 aa21.78■■□□□ 1.08
CNTNAP3B-212ENST00000617422 JOSD2Q8TAC2 188 aa21.78■■□□□ 1.08
CNTNAP3B-212ENST00000617422 DDX27Q96GQ7 796 aaKnown RBP21.78■■□□□ 1.08
CNTNAP3B-212ENST00000617422 KIAA1257Q9ULG3 409 aa21.78■■□□□ 1.08
CNTNAP3B-212ENST00000617422 PHF24Q9UPV7 400 aa21.78■■□□□ 1.08
CNTNAP3B-212ENST00000617422 SYF2O95926 243 aaKnown RBP21.78■■□□□ 1.08
CNTNAP3B-212ENST00000617422 RFC1P35251 1148 aaPredicted RBP21.78■■□□□ 1.08
CNTNAP3B-212ENST00000617422 PNPLA4P41247 253 aa21.78■■□□□ 1.08
CNTNAP3B-212ENST00000617422 SLC1A1P43005 524 aa21.78■■□□□ 1.08
CNTNAP3B-212ENST00000617422 CLCNKBP51801 687 aa21.78■■□□□ 1.08
CNTNAP3B-212ENST00000617422 MTFR1Q15390 333 aa21.78■■□□□ 1.08
CNTNAP3B-212ENST00000617422 SRLQ86TD4 932 aa21.78■■□□□ 1.08
CNTNAP3B-212ENST00000617422 RTN4RL1Q86UN2 441 aaPredicted RBP21.78■■□□□ 1.08
CNTNAP3B-212ENST00000617422 C18orf8Q96DM3 657 aa21.78■■□□□ 1.08
CNTNAP3B-212ENST00000617422 STIM2Q9P246 746 aa21.78■■□□□ 1.08
CNTNAP3B-212ENST00000617422 USTQ9Y2C2 406 aa21.78■■□□□ 1.08
CNTNAP3B-212ENST00000617422 GIT1Q9Y2X7 761 aa21.78■■□□□ 1.08
CNTNAP3B-212ENST00000617422 MKI67P46013 3256 aaKnown RBP21.78■■□□□ 1.08
CNTNAP3B-212ENST00000617422 A8MXQ7 604 aa21.77■■□□□ 1.08
CNTNAP3B-212ENST00000617422 F8VP50 259 aa21.77■■□□□ 1.08
CNTNAP3B-212ENST00000617422 THP07101 528 aa21.77■■□□□ 1.08
CNTNAP3B-212ENST00000617422 PSMC1P62191 440 aaKnown RBP21.77■■□□□ 1.08
CNTNAP3B-212ENST00000617422 TRADDQ15628 312 aa21.77■■□□□ 1.08
CNTNAP3B-212ENST00000617422 SV2CQ496J9 727 aa21.77■■□□□ 1.08
CNTNAP3B-212ENST00000617422 UNC93AQ86WB7 457 aa21.77■■□□□ 1.08
CNTNAP3B-212ENST00000617422 HERPUD2Q9BSE4 406 aa21.77■■□□□ 1.08
CNTNAP3B-212ENST00000617422 SART1O43290 800 aaKnown RBP21.77■■□□□ 1.07
CNTNAP3B-212ENST00000617422 GABBR2O75899 941 aa21.77■■□□□ 1.07
CNTNAP3B-212ENST00000617422 GNL1P36915 607 aaPredicted RBP21.77■■□□□ 1.07
CNTNAP3B-212ENST00000617422 GABRB2P47870 512 aa21.77■■□□□ 1.07
CNTNAP3B-212ENST00000617422 RWDD2BP57060 319 aa21.77■■□□□ 1.07
CNTNAP3B-212ENST00000617422 ARHGEF6Q15052 776 aa21.77■■□□□ 1.07
CNTNAP3B-212ENST00000617422 APPL2Q8NEU8 664 aa21.77■■□□□ 1.07
CNTNAP3B-212ENST00000617422 PIWIL1Q96J94 861 aaKnown RBP21.77■■□□□ 1.07
CNTNAP3B-212ENST00000617422 A0A0U1RQG5 324 aaPredicted RBP21.76■■□□□ 1.07
CNTNAP3B-212ENST00000617422 ESYT3A0FGR9 886 aa21.76■■□□□ 1.07
CNTNAP3B-212ENST00000617422 ARVCFO00192 962 aa21.76■■□□□ 1.07
CNTNAP3B-212ENST00000617422 CCDC130P13994 396 aa21.76■■□□□ 1.07
CNTNAP3B-212ENST00000617422 PMF1Q6P1K2 205 aa21.76■■□□□ 1.07
CNTNAP3B-212ENST00000617422 DCUN1D2Q6PH85 259 aa21.76■■□□□ 1.07
CNTNAP3B-212ENST00000617422 ANKS1BQ7Z6G8 1248 aa21.76■■□□□ 1.07
CNTNAP3B-212ENST00000617422 ADGRF2Q8IZF7 708 aa21.76■■□□□ 1.07
CNTNAP3B-212ENST00000617422 LINC01599Q8WXQ3 324 aa21.76■■□□□ 1.07
CNTNAP3B-212ENST00000617422 IP6K2Q9UHH9 426 aa21.76■■□□□ 1.07
CNTNAP3B-212ENST00000617422 CASTOR2A6NHX0 329 aa21.75■■□□□ 1.07
CNTNAP3B-212ENST00000617422 MYO1CO00159 1063 aa21.75■■□□□ 1.07
CNTNAP3B-212ENST00000617422 RGS7P49802 495 aa21.75■■□□□ 1.07
CNTNAP3B-212ENST00000617422 CDR1P51861 262 aa21.75■■□□□ 1.07
CNTNAP3B-212ENST00000617422 GLE1Q53GS7 698 aaKnown RBP21.75■■□□□ 1.07
CNTNAP3B-212ENST00000617422 HACE1Q8IYU2 909 aa21.75■■□□□ 1.07
CNTNAP3B-212ENST00000617422 CRYBG2Q8N1P7 616 aa21.75■■□□□ 1.07
CNTNAP3B-212ENST00000617422 EMC1Q8N766 993 aa21.75■■□□□ 1.07
CNTNAP3B-212ENST00000617422 AMACRQ9UHK6 382 aa21.75■■□□□ 1.07
CNTNAP3B-212ENST00000617422 STRIP2Q9ULQ0 834 aa21.75■■□□□ 1.07
CNTNAP3B-212ENST00000617422 RRP15Q9Y3B9 282 aaKnown RBP21.75■■□□□ 1.07
CNTNAP3B-212ENST00000617422 TDRD15B5MCY1 1934 aaKnown RBP21.75■■□□□ 1.07
CNTNAP3B-212ENST00000617422 SIGLEC16A6NMB1 481 aa21.75■■□□□ 1.07
CNTNAP3B-212ENST00000617422 E5RJQ4 531 aa21.75■■□□□ 1.07
CNTNAP3B-212ENST00000617422 ATP2C2O75185 946 aa21.75■■□□□ 1.07
CNTNAP3B-212ENST00000617422 HEXIM1O94992 359 aaKnown RBP21.75■■□□□ 1.07
CNTNAP3B-212ENST00000617422 POMCP01189 267 aa21.75■■□□□ 1.07
CNTNAP3B-212ENST00000617422 GSCP56915 257 aaPredicted RBP21.75■■□□□ 1.07
CNTNAP3B-212ENST00000617422 SIX1Q15475 284 aaPredicted RBP21.75■■□□□ 1.07
CNTNAP3B-212ENST00000617422 ATP13A4Q4VNC1 1196 aa21.75■■□□□ 1.07
CNTNAP3B-212ENST00000617422 WSCD1Q658N2 575 aa21.75■■□□□ 1.07
CNTNAP3B-212ENST00000617422 TXNRD3NBQ6F5E7 133 aa21.75■■□□□ 1.07
CNTNAP3B-212ENST00000617422 ZNF598Q86UK7 904 aaKnown RBP21.75■■□□□ 1.07
CNTNAP3B-212ENST00000617422 ARFGAP1Q8N6T3 406 aa21.75■■□□□ 1.07
CNTNAP3B-212ENST00000617422 MCRS1Q96EZ8 462 aa21.75■■□□□ 1.07
CNTNAP3B-212ENST00000617422 RASSF4Q9H2L5 321 aa21.75■■□□□ 1.07
CNTNAP3B-212ENST00000617422 RSAD1Q9HA92 442 aa21.75■■□□□ 1.07
CNTNAP3B-212ENST00000617422 METTL5Q9NRN9 209 aaKnown RBP21.75■■□□□ 1.07
CNTNAP3B-212ENST00000617422 SLC38A7Q9NVC3 462 aa21.75■■□□□ 1.07
CNTNAP3B-212ENST00000617422 CCDC188H7C350 402 aa21.74■■□□□ 1.07
CNTNAP3B-212ENST00000617422 CYB561D2O14569 222 aa21.74■■□□□ 1.07
CNTNAP3B-212ENST00000617422 CAND2O75155 1236 aa21.74■■□□□ 1.07
CNTNAP3B-212ENST00000617422 KRT3P12035 628 aa21.74■■□□□ 1.07
CNTNAP3B-212ENST00000617422 MAN1A1P33908 653 aa21.74■■□□□ 1.07
CNTNAP3B-212ENST00000617422 CDK7P50613 346 aa21.74■■□□□ 1.07
CNTNAP3B-212ENST00000617422 SLC13A5Q86YT5 568 aaPredicted RBP21.74■■□□□ 1.07
CNTNAP3B-212ENST00000617422 PRELID2Q8N945 189 aa21.74■■□□□ 1.07
CNTNAP3B-212ENST00000617422 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.74■■□□□ 1.07
CNTNAP3B-212ENST00000617422 SYNCQ9H7C4 482 aa21.74■■□□□ 1.07
CNTNAP3B-212ENST00000617422 PAK6Q9NQU5 681 aaPredicted RBP21.74■■□□□ 1.07
CNTNAP3B-212ENST00000617422 SQORQ9Y6N5 450 aa21.74■■□□□ 1.07
CNTNAP3B-212ENST00000617422 PODXLO00592 558 aa21.74■■□□□ 1.07
CNTNAP3B-212ENST00000617422 HUS1O60921 280 aa21.74■■□□□ 1.07
CNTNAP3B-212ENST00000617422 RAB27AP51159 221 aa21.74■■□□□ 1.07
CNTNAP3B-212ENST00000617422 SEL1L2Q5TEA6 688 aa21.74■■□□□ 1.07
CNTNAP3B-212ENST00000617422 KIAA0319Q5VV43 1072 aa21.74■■□□□ 1.07
CNTNAP3B-212ENST00000617422 ARHGAP17Q68EM7 881 aa21.74■■□□□ 1.07
CNTNAP3B-212ENST00000617422 ECHDC2Q86YB7 292 aa21.74■■□□□ 1.07
CNTNAP3B-212ENST00000617422 TOP6BLQ8N6T0 577 aa21.74■■□□□ 1.07
CNTNAP3B-212ENST00000617422 SLC35F5Q8WV83 523 aa21.74■■□□□ 1.07
CNTNAP3B-212ENST00000617422 SNX25Q9H3E2 840 aa21.74■■□□□ 1.07
CNTNAP3B-212ENST00000617422 PTPN22Q9Y2R2 807 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms