RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 MRPS6P82932 125 aaKnown RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 ORC1Q13415 861 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 SUSD4Q5VX71 490 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 KRBA2Q6ZNG9 492 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 PHYKPLQ8IUZ5 450 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 PPHLN1Q8NEY8 458 aaKnown RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 WHAMMQ8TF30 809 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 SGSM3Q96HU1 749 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 RPS6KB2Q9UBS0 482 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 SNX6Q9UNH7 406 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 MORC2Q9Y6X9 1032 aaPredicted RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 PHOSPHO2Q8TCD6 241 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 PRCCQ92733 491 aaPredicted RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 ZNF594Q96JF6 807 aaPredicted RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 SCML1Q9UN30 329 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 ATP9BO43861 1147 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 MT-ND5P03915 603 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 SMARCA1P28370 1054 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 SDC4P31431 198 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 FAM160A1Q05DH4 1040 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 ZNF177Q13360 481 aaPredicted RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 FBXO43Q4G163 708 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 AARS2Q5JTZ9 985 aaKnown RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 PIGWQ7Z7B1 504 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 RBM23Q86U06 439 aaKnown RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 KRT78Q8N1N4 520 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 PPM1KQ8N3J5 372 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 GOT1L1Q8NHS2 421 aaPredicted RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 NGBQ9NPG2 151 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 PSMC2P35998 433 aaKnown RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 TCEAL5Q5H9L2 206 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 STX19Q8N4C7 294 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 MMGT1Q8N4V1 131 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 TMEM125Q96AQ2 219 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 CLIP3Q96DZ5 547 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 RAD9AQ99638 391 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 SLC13A1Q9BZW2 595 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 LDAHQ9H6V9 325 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 DYRK1BQ9Y463 629 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 ORC6Q9Y5N6 252 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 F8VZ95 297 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 H3BRJ5 948 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 ZNF862O60290 1169 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 ANP32DO95626 131 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 MAPK8P45983 427 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 VEGFBP49765 207 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 STX1AQ16623 288 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 FAM47AQ5JRC9 791 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 TTC39BQ5VTQ0 682 aaPredicted RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 OR6C4Q8NGE1 309 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 SDR42E1Q8WUS8 393 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 TTC17Q96AE7 1141 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 TRMT61BQ9BVS5 477 aaKnown RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 CREB5Q02930 508 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 CYP2A13Q16696 494 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 KIRREL3Q8IZU9 778 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 SH3GL3Q99963 347 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 EPB41L4AQ9HCS5 686 aaPredicted RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 DMTF1Q9Y222 760 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 GJB6O95452 261 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 ZFXP17010 805 aaPredicted RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 KCNA5P22460 613 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 C10orf120Q5SQS8 335 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 EFCAB12Q6NXP0 572 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 ARHGEF18Q6ZSZ5 1173 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 RFX6Q8HWS3 928 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 DNAAF3Q8N9W5 541 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 GPR152Q8TDT2 470 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 CTAGE9A4FU28 777 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 PLGP00747 810 aaPredicted RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 PDGFRAP16234 1089 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 RENBPP51606 427 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 MRPS15P82914 257 aaKnown RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 PDCLQ13371 301 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 SLMAPQ14BN4 828 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 DIXDC1Q155Q3 683 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 PLEKHG6Q3KR16 790 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 RAPH1Q70E73 1250 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 FAM20AQ96MK3 541 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 NOC4LQ9BVI4 516 aaKnown RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 MTMR12Q9C0I1 747 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 POLR3FQ9H1D9 316 aaPredicted RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 KCNH6Q9H252 994 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 VCXQ9H320 206 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 PRKAG3Q9UGI9 489 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 H3BRB1 525 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 ACSL4O60488 711 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 UGT1A1P22309 533 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 STX2P32856 288 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 RAP1GDS1P52306 607 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 NDST1P52848 882 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 PHF19Q5T6S3 580 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 CCDC62Q6P9F0 684 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 TMEM110Q86TL2 294 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 FRS2Q8WU20 508 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 TUT1Q9H6E5 874 aaKnown RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 SEL1LQ9UBV2 794 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 MINPP1Q9UNW1 487 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 HGSO14964 777 aaPredicted RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms