RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 PPP1R26Q5T8A7 1209 aaPredicted RBP16.59■□□□□ 0.25
PCDHGC3-204ENST00000617222 PAQR9Q6ZVX9 377 aa16.59■□□□□ 0.25
PCDHGC3-204ENST00000617222 DRC7Q8IY82 874 aa16.59■□□□□ 0.25
PCDHGC3-204ENST00000617222 FUKQ8N0W3 1084 aa16.59■□□□□ 0.25
PCDHGC3-204ENST00000617222 SPPL2BQ8TCT7 592 aa16.59■□□□□ 0.25
PCDHGC3-204ENST00000617222 SLC2A14Q8TDB8 520 aa16.59■□□□□ 0.25
PCDHGC3-204ENST00000617222 C2orf15Q8WU43 125 aaKnown RBP16.59■□□□□ 0.25
PCDHGC3-204ENST00000617222 RHOBTB2Q9BYZ6 727 aa16.59■□□□□ 0.25
PCDHGC3-204ENST00000617222 ZNF518BQ9C0D4 1074 aa16.59■□□□□ 0.25
PCDHGC3-204ENST00000617222 CRISPLD1Q9H336 500 aa16.59■□□□□ 0.25
PCDHGC3-204ENST00000617222 MYO6Q9UM54 1294 aa16.59■□□□□ 0.25
PCDHGC3-204ENST00000617222 LUC7L2Q9Y383 392 aaKnown RBP16.59■□□□□ 0.25
PCDHGC3-204ENST00000617222 HCFC2Q9Y5Z7 792 aa16.59■□□□□ 0.25
PCDHGC3-204ENST00000617222 CHD7Q9P2D1 2997 aa16.59■□□□□ 0.25
PCDHGC3-204ENST00000617222 TSC2P49815 1807 aa16.59■□□□□ 0.25
PCDHGC3-204ENST00000617222 LRRC53A6NM62 1247 aa16.58■□□□□ 0.24
PCDHGC3-204ENST00000617222 PRRG1O14668 218 aa16.58■□□□□ 0.24
PCDHGC3-204ENST00000617222 C1RP00736 705 aa16.58■□□□□ 0.24
PCDHGC3-204ENST00000617222 BDNFP23560 247 aa16.58■□□□□ 0.24
PCDHGC3-204ENST00000617222 CYP2F1P24903 491 aa16.58■□□□□ 0.24
PCDHGC3-204ENST00000617222 GNA15P30679 374 aa16.58■□□□□ 0.24
PCDHGC3-204ENST00000617222 MRE11P49959 708 aa16.58■□□□□ 0.24
PCDHGC3-204ENST00000617222 BPIFB4P59827 614 aa16.58■□□□□ 0.24
PCDHGC3-204ENST00000617222 ARID5AQ03989 594 aa16.58■□□□□ 0.24
PCDHGC3-204ENST00000617222 TRIM14Q14142 442 aa16.58■□□□□ 0.24
PCDHGC3-204ENST00000617222 ARHGAP17Q68EM7 881 aa16.58■□□□□ 0.24
PCDHGC3-204ENST00000617222 SLC47A2Q86VL8 602 aa16.58■□□□□ 0.24
PCDHGC3-204ENST00000617222 TTC9BQ8N6N2 239 aa16.58■□□□□ 0.24
PCDHGC3-204ENST00000617222 EFHBQ8N7U6 833 aa16.58■□□□□ 0.24
PCDHGC3-204ENST00000617222 ZNF397Q8NF99 534 aaPredicted RBP16.58■□□□□ 0.24
PCDHGC3-204ENST00000617222 VN1R2Q8NFZ6 395 aa16.58■□□□□ 0.24
PCDHGC3-204ENST00000617222 ZNF606Q8WXB4 792 aa16.58■□□□□ 0.24
PCDHGC3-204ENST00000617222 FUBP3Q96I24 572 aaKnown RBP eCLIP16.58■□□□□ 0.24
PCDHGC3-204ENST00000617222 HNRNPABQ99729 332 aaKnown RBP16.58■□□□□ 0.24
PCDHGC3-204ENST00000617222 ZSWIM1Q9BR11 485 aa16.58■□□□□ 0.24
PCDHGC3-204ENST00000617222 FBXW11Q9UKB1 542 aa16.58■□□□□ 0.24
PCDHGC3-204ENST00000617222 MAFFQ9ULX9 164 aa16.58■□□□□ 0.24
PCDHGC3-204ENST00000617222 PRRC2BQ5JSZ5 2229 aaKnown RBP16.58■□□□□ 0.24
PCDHGC3-204ENST00000617222 ATP8B3O60423 1300 aa16.57■□□□□ 0.24
PCDHGC3-204ENST00000617222 LINC01565O15544 149 aa16.57■□□□□ 0.24
PCDHGC3-204ENST00000617222 THAP12O43422 761 aa16.57■□□□□ 0.24
PCDHGC3-204ENST00000617222 SOAT2O75908 522 aa16.57■□□□□ 0.24
PCDHGC3-204ENST00000617222 TPM1P09493 284 aa16.57■□□□□ 0.24
PCDHGC3-204ENST00000617222 HAPLN1P10915 354 aaPredicted RBP16.57■□□□□ 0.24
PCDHGC3-204ENST00000617222 CYP11B1P15538 503 aa16.57■□□□□ 0.24
PCDHGC3-204ENST00000617222 SSTR3P32745 418 aaPredicted RBP16.57■□□□□ 0.24
PCDHGC3-204ENST00000617222 KRT9P35527 623 aa16.57■□□□□ 0.24
PCDHGC3-204ENST00000617222 ZBED6P86452 979 aa16.57■□□□□ 0.24
PCDHGC3-204ENST00000617222 GOLGA8FQ08AF8 430 aa16.57■□□□□ 0.24
PCDHGC3-204ENST00000617222 GOLGA8DPQ0D2H9 430 aa16.57■□□□□ 0.24
PCDHGC3-204ENST00000617222 TBX2Q13207 712 aaPredicted RBP16.57■□□□□ 0.24
PCDHGC3-204ENST00000617222 CCDC85BQ15834 202 aaPredicted RBP16.57■□□□□ 0.24
PCDHGC3-204ENST00000617222 CNGA2Q16280 664 aa16.57■□□□□ 0.24
PCDHGC3-204ENST00000617222 MGAT5BQ3V5L5 792 aa16.57■□□□□ 0.24
PCDHGC3-204ENST00000617222 CFAP221Q4G0U5 840 aa16.57■□□□□ 0.24
PCDHGC3-204ENST00000617222 LIN9Q5TKA1 542 aa16.57■□□□□ 0.24
PCDHGC3-204ENST00000617222 SFMBT2Q5VUG0 894 aa16.57■□□□□ 0.24
PCDHGC3-204ENST00000617222 FAM35AQ86V20 835 aa16.57■□□□□ 0.24
PCDHGC3-204ENST00000617222 SCN4BQ8IWT1 228 aa16.57■□□□□ 0.24
PCDHGC3-204ENST00000617222 TCEAL8Q8IYN2 117 aa16.57■□□□□ 0.24
PCDHGC3-204ENST00000617222 SEPT5Q99719 369 aaPredicted RBP16.57■□□□□ 0.24
PCDHGC3-204ENST00000617222 PLEKHA4Q9H4M7 779 aa16.57■□□□□ 0.24
PCDHGC3-204ENST00000617222 ABCB6Q9NP58 842 aa16.57■□□□□ 0.24
PCDHGC3-204ENST00000617222 MAN1C1Q9NR34 630 aa16.57■□□□□ 0.24
PCDHGC3-204ENST00000617222 O00370 1275 aa16.56■□□□□ 0.24
PCDHGC3-204ENST00000617222 AP1G2O75843 785 aa16.56■□□□□ 0.24
PCDHGC3-204ENST00000617222 C8AP07357 584 aa16.56■□□□□ 0.24
PCDHGC3-204ENST00000617222 FERP16591 822 aa16.56■□□□□ 0.24
PCDHGC3-204ENST00000617222 CDC25BP30305 580 aa16.56■□□□□ 0.24
PCDHGC3-204ENST00000617222 GRIK1P39086 918 aa16.56■□□□□ 0.24
PCDHGC3-204ENST00000617222 MAGEA11P43364 429 aa16.56■□□□□ 0.24
PCDHGC3-204ENST00000617222 TUFMP49411 452 aaKnown RBP16.56■□□□□ 0.24
PCDHGC3-204ENST00000617222 ADAM15Q13444 863 aa16.56■□□□□ 0.24
PCDHGC3-204ENST00000617222 KCNC3Q14003 757 aa16.56■□□□□ 0.24
PCDHGC3-204ENST00000617222 ASIC2Q16515 512 aa16.56■□□□□ 0.24
PCDHGC3-204ENST00000617222 GOLGA7BQ2TAP0 167 aa16.56■□□□□ 0.24
PCDHGC3-204ENST00000617222 LCLAT1Q6UWP7 414 aa16.56■□□□□ 0.24
PCDHGC3-204ENST00000617222 EP400NLQ6ZTU2 488 aa16.56■□□□□ 0.24
PCDHGC3-204ENST00000617222 CCDC149Q6ZUS6 474 aa16.56■□□□□ 0.24
PCDHGC3-204ENST00000617222 IRF2BP2Q7Z5L9 587 aa16.56■□□□□ 0.24
PCDHGC3-204ENST00000617222 SLC7A14Q8TBB6 771 aa16.56■□□□□ 0.24
PCDHGC3-204ENST00000617222 UBA3Q8TBC4 463 aa16.56■□□□□ 0.24
PCDHGC3-204ENST00000617222 HDAC7Q8WUI4 952 aa16.56■□□□□ 0.24
PCDHGC3-204ENST00000617222 PPM1EQ8WY54 764 aa16.56■□□□□ 0.24
PCDHGC3-204ENST00000617222 CASP10Q92851 521 aa16.56■□□□□ 0.24
PCDHGC3-204ENST00000617222 SMARCD1Q96GM5 515 aa16.56■□□□□ 0.24
PCDHGC3-204ENST00000617222 NUCKS1Q9H1E3 243 aaKnown RBP16.56■□□□□ 0.24
PCDHGC3-204ENST00000617222 KRT82Q9NSB4 513 aa16.56■□□□□ 0.24
PCDHGC3-204ENST00000617222 AIPL1Q9NZN9 384 aa16.56■□□□□ 0.24
PCDHGC3-204ENST00000617222 HSFX1Q9UBD0 423 aa16.56■□□□□ 0.24
PCDHGC3-204ENST00000617222 DPP7Q9UHL4 492 aa16.56■□□□□ 0.24
PCDHGC3-204ENST00000617222 TSPAN16Q9UKR8 245 aa16.56■□□□□ 0.24
PCDHGC3-204ENST00000617222 SPDYE4A6NLX3 237 aa16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 MED7O43513 233 aa16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 NCK2O43639 380 aa16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 MICAL2O94851 1124 aa16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 GLP2RO95838 553 aa16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 CCDC172P0C7W6 258 aa16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 FAM200BP0CF97 657 aa16.55■□□□□ 0.24
PCDHGC3-204ENST00000617222 GPR15P49685 360 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms