RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 DDX1Q92499 740 aaKnown RBP12.17□□□□□ -0.46
SLIRP-212ENST00000613856 MMS19Q96T76 1030 aa12.17□□□□□ -0.46
SLIRP-212ENST00000613856 AGPAT1Q99943 283 aa12.17□□□□□ -0.46
SLIRP-212ENST00000613856 PAAF1Q9BRP4 392 aa12.17□□□□□ -0.46
SLIRP-212ENST00000613856 PLVAPQ9BX97 442 aa12.17□□□□□ -0.46
SLIRP-212ENST00000613856 RWDD3Q9Y3V2 267 aa12.17□□□□□ -0.46
SLIRP-212ENST00000613856 ADGRG1Q9Y653 693 aa12.17□□□□□ -0.46
SLIRP-212ENST00000613856 RIF1Q5UIP0 2472 aaKnown RBP12.17□□□□□ -0.46
SLIRP-212ENST00000613856 VWA8A3KMH1 1905 aa12.17□□□□□ -0.46
SLIRP-212ENST00000613856 TBKBP1A7MCY6 615 aa12.16□□□□□ -0.46
SLIRP-212ENST00000613856 M0QZQ0 153 aa12.16□□□□□ -0.46
SLIRP-212ENST00000613856 DDX3XO00571 662 aaKnown RBP eCLIP12.16□□□□□ -0.463e-31■■■■■ 27.5
SLIRP-212ENST00000613856 HUS1O60921 280 aa12.16□□□□□ -0.46
SLIRP-212ENST00000613856 IPO7O95373 1038 aaKnown RBP12.16□□□□□ -0.46
SLIRP-212ENST00000613856 CCDC175P0C221 793 aa12.16□□□□□ -0.46
SLIRP-212ENST00000613856 WARSP23381 471 aaKnown RBP12.16□□□□□ -0.46
SLIRP-212ENST00000613856 MSNP26038 577 aaKnown RBP12.16□□□□□ -0.46
SLIRP-212ENST00000613856 GNA15P30679 374 aa12.16□□□□□ -0.46
SLIRP-212ENST00000613856 RAD23BP54727 409 aa12.16□□□□□ -0.46
SLIRP-212ENST00000613856 CDH8P55286 799 aa12.16□□□□□ -0.46
SLIRP-212ENST00000613856 ERVFC1P60507 584 aa12.16□□□□□ -0.46
SLIRP-212ENST00000613856 KRT83P78385 493 aa12.16□□□□□ -0.46
SLIRP-212ENST00000613856 CDR2Q01850 454 aa12.16□□□□□ -0.46
SLIRP-212ENST00000613856 CD300LGQ6UXG3 332 aa12.16□□□□□ -0.46
SLIRP-212ENST00000613856 ADGRF2Q8IZF7 708 aa12.16□□□□□ -0.46
SLIRP-212ENST00000613856 APPL2Q8NEU8 664 aa12.16□□□□□ -0.46
SLIRP-212ENST00000613856 SLC30A5Q8TAD4 765 aa12.16□□□□□ -0.46
SLIRP-212ENST00000613856 LNX1Q8TBB1 728 aaPredicted RBP12.16□□□□□ -0.46
SLIRP-212ENST00000613856 WHAMMQ8TF30 809 aa12.16□□□□□ -0.46
SLIRP-212ENST00000613856 KBTBD7Q8WVZ9 684 aa12.16□□□□□ -0.46
SLIRP-212ENST00000613856 SUSD3Q96L08 255 aa12.16□□□□□ -0.46
SLIRP-212ENST00000613856 SENP8Q96LD8 212 aa12.16□□□□□ -0.46
SLIRP-212ENST00000613856 FAM193BQ96PV7 902 aaPredicted RBP12.16□□□□□ -0.46
SLIRP-212ENST00000613856 PRRX2Q99811 253 aa12.16□□□□□ -0.46
SLIRP-212ENST00000613856 NRDE2Q9H7Z3 1164 aa12.16□□□□□ -0.46
SLIRP-212ENST00000613856 CACNG4Q9UBN1 327 aa12.16□□□□□ -0.46
SLIRP-212ENST00000613856 L1RE1Q9UN81 338 aa12.16□□□□□ -0.46
SLIRP-212ENST00000613856 REXO2Q9Y3B8 237 aaKnown RBP12.16□□□□□ -0.46
SLIRP-212ENST00000613856 A0A087X0T9 212 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 CARNS1A5YM72 827 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 GOLGA6L9A6NEM1 432 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 ESPNB1AK53 854 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 PROB1E7EW31 1015 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 CYB561D2O14569 222 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 GABRDO14764 452 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 ZNF263O14978 683 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 ZSCAN12O43309 604 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 B3GAT3O94766 335 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 KIF4AO95239 1232 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 CYP11A1P05108 521 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 FAM228BP0C875 321 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 ODC1P11926 461 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 CHRNB2P17787 502 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 NDST1P52848 882 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 FMO1Q01740 532 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 SPA17Q15506 151 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 C10orf76Q5T2E6 689 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 TRIM72Q6ZMU5 477 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 ZNF662Q6ZS27 426 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 CMTR2Q8IYT2 770 aaKnown RBP12.15□□□□□ -0.46
SLIRP-212ENST00000613856 CCAR2Q8N163 923 aaKnown RBP12.15□□□□□ -0.46
SLIRP-212ENST00000613856 TXLNBQ8N3L3 684 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 PDCL2Q8N4E4 241 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 SLC4A11Q8NBS3 891 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 ACRBPQ8NEB7 543 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 SLC20A1Q8WUM9 679 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 TMEM176AQ96HP8 235 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 TWNKQ96RR1 684 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 MRPL45Q9BRJ2 306 aaKnown RBP12.15□□□□□ -0.46
SLIRP-212ENST00000613856 DESI2Q9BSY9 194 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 NT5C1AQ9BXI3 368 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 ELOVL4Q9GZR5 314 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 DNAI2Q9GZS0 605 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 S1PR5Q9H228 398 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 TLE6Q9H808 572 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 LUC7LQ9NQ29 371 aaKnown RBP12.15□□□□□ -0.46
SLIRP-212ENST00000613856 SPTLC3Q9NUV7 552 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 HMGXB4Q9UGU5 601 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 ADAMTS1Q9UHI8 967 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 NAGPAQ9UK23 515 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 DSEQ9UL01 958 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 KIAA1257Q9ULG3 409 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 PPP2R2CQ9Y2T4 447 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 DNAH14Q0VDD8 3507 aa12.15□□□□□ -0.46
SLIRP-212ENST00000613856 PTPRDP23468 1912 aa12.14□□□□□ -0.47
SLIRP-212ENST00000613856 GALR2O43603 387 aaPredicted RBP12.14□□□□□ -0.47
SLIRP-212ENST00000613856 GZMAP12544 262 aa12.14□□□□□ -0.47
SLIRP-212ENST00000613856 TYMPP19971 482 aa12.14□□□□□ -0.47
SLIRP-212ENST00000613856 TNFAIP3P21580 790 aa12.14□□□□□ -0.47
SLIRP-212ENST00000613856 IGFBP6P24592 240 aaPredicted RBP12.14□□□□□ -0.47
SLIRP-212ENST00000613856 OR1G1P47890 313 aa12.14□□□□□ -0.47
SLIRP-212ENST00000613856 VAV2P52735 878 aa12.14□□□□□ -0.47
SLIRP-212ENST00000613856 GFPT1Q06210 699 aaPredicted RBP12.14□□□□□ -0.47
SLIRP-212ENST00000613856 C1QBPQ07021 282 aaKnown RBP12.14□□□□□ -0.47
SLIRP-212ENST00000613856 KCNC3Q14003 757 aa12.14□□□□□ -0.47
SLIRP-212ENST00000613856 PPP1R2P3Q6NXS1 205 aa12.14□□□□□ -0.47
SLIRP-212ENST00000613856 LLGL2Q6P1M3 1020 aa12.14□□□□□ -0.47
SLIRP-212ENST00000613856 SYCE2Q6PIF2 218 aa12.14□□□□□ -0.47
SLIRP-212ENST00000613856 DSTYKQ6XUX3 929 aa12.14□□□□□ -0.47
SLIRP-212ENST00000613856 GLYCTKQ8IVS8 523 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms