RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 CYP27A1Q02318 531 aa13.53□□□□□ -0.24
CSTF1-208ENST00000613138 DCAF17Q5H9S7 520 aaPredicted RBP13.53□□□□□ -0.24
CSTF1-208ENST00000613138 INTS8Q75QN2 995 aaKnown RBP13.53□□□□□ -0.24
CSTF1-208ENST00000613138 DPH6Q7L8W6 267 aa13.53□□□□□ -0.24
CSTF1-208ENST00000613138 SPATA2LQ8IUW3 424 aaPredicted RBP13.53□□□□□ -0.24
CSTF1-208ENST00000613138 LRRC3BQ96PB8 259 aa13.53□□□□□ -0.24
CSTF1-208ENST00000613138 TSG101Q99816 390 aa13.53□□□□□ -0.24
CSTF1-208ENST00000613138 B3GNT5Q9BYG0 378 aa13.53□□□□□ -0.24
CSTF1-208ENST00000613138 ZNF518BQ9C0D4 1074 aa13.53□□□□□ -0.24
CSTF1-208ENST00000613138 SLITRK6Q9H5Y7 841 aa13.53□□□□□ -0.24
CSTF1-208ENST00000613138 HOOK1Q9UJC3 728 aaKnown RBP13.53□□□□□ -0.24
CSTF1-208ENST00000613138 CDH9Q9ULB4 789 aa13.53□□□□□ -0.24
CSTF1-208ENST00000613138 F5P12259 2224 aa13.52□□□□□ -0.24
CSTF1-208ENST00000613138 SLC38A8A6NNN8 435 aa13.52□□□□□ -0.25
CSTF1-208ENST00000613138 A8MXQ7 604 aa13.52□□□□□ -0.25
CSTF1-208ENST00000613138 IKBKBO14920 756 aa13.52□□□□□ -0.25
CSTF1-208ENST00000613138 PI15O43692 258 aa13.52□□□□□ -0.25
CSTF1-208ENST00000613138 PRAMEF12O95522 483 aa13.52□□□□□ -0.25
CSTF1-208ENST00000613138 NPR3P17342 541 aa13.52□□□□□ -0.25
CSTF1-208ENST00000613138 ATICP31939 592 aa13.52□□□□□ -0.25
CSTF1-208ENST00000613138 TUFMP49411 452 aaKnown RBP13.52□□□□□ -0.25
CSTF1-208ENST00000613138 NDST1P52848 882 aa13.52□□□□□ -0.25
CSTF1-208ENST00000613138 USP46P62068 366 aa13.52□□□□□ -0.25
CSTF1-208ENST00000613138 NOP14P78316 857 aaKnown RBP13.52□□□□□ -0.25
CSTF1-208ENST00000613138 NFE2Q16621 373 aaPredicted RBP13.52□□□□□ -0.25
CSTF1-208ENST00000613138 TCERG1LQ5VWI1 586 aa13.52□□□□□ -0.25
CSTF1-208ENST00000613138 PAQR9Q6ZVX9 377 aa13.52□□□□□ -0.25
CSTF1-208ENST00000613138 ACOT1Q86TX2 421 aa13.52□□□□□ -0.25
CSTF1-208ENST00000613138 UBALD2Q8IYN6 164 aa13.52□□□□□ -0.25
CSTF1-208ENST00000613138 SIX5Q8N196 739 aa13.52□□□□□ -0.25
CSTF1-208ENST00000613138 ZSCAN18Q8TBC5 510 aaPredicted RBP13.52□□□□□ -0.25
CSTF1-208ENST00000613138 TATDN2Q93075 761 aa13.52□□□□□ -0.25
CSTF1-208ENST00000613138 ASB16Q96NS5 453 aa13.52□□□□□ -0.25
CSTF1-208ENST00000613138 IPO9Q96P70 1041 aaKnown RBP13.52□□□□□ -0.25
CSTF1-208ENST00000613138 ARID3AQ99856 593 aa13.52□□□□□ -0.25
CSTF1-208ENST00000613138 ATXN3LQ9H3M9 355 aa13.52□□□□□ -0.25
CSTF1-208ENST00000613138 VRTNQ9H8Y1 702 aa13.52□□□□□ -0.25
CSTF1-208ENST00000613138 TMEM8AQ9HCN3 771 aa13.52□□□□□ -0.25
CSTF1-208ENST00000613138 KIAA1468Q9P260 1216 aa13.52□□□□□ -0.25
CSTF1-208ENST00000613138 PATJQ8NI35 1801 aa13.52□□□□□ -0.25
CSTF1-208ENST00000613138 HELZP42694 1942 aaKnown RBP13.52□□□□□ -0.25
CSTF1-208ENST00000613138 MIA3Q5JRA6 1907 aa13.52□□□□□ -0.25
CSTF1-208ENST00000613138 ATG2BQ96BY7 2078 aa13.52□□□□□ -0.25
CSTF1-208ENST00000613138 MYOFQ9NZM1 2061 aa13.51□□□□□ -0.25
CSTF1-208ENST00000613138 ZNF197O14709 1029 aa13.51□□□□□ -0.25
CSTF1-208ENST00000613138 PSMA7O14818 248 aa13.51□□□□□ -0.25
CSTF1-208ENST00000613138 CCDC130P13994 396 aa13.51□□□□□ -0.25
CSTF1-208ENST00000613138 CD58P19256 250 aa13.51□□□□□ -0.25
CSTF1-208ENST00000613138 AP3M2P53677 418 aa13.51□□□□□ -0.25
CSTF1-208ENST00000613138 FKBP3Q00688 224 aaKnown RBP13.51□□□□□ -0.25
CSTF1-208ENST00000613138 GPR158Q5T848 1215 aa13.51□□□□□ -0.25
CSTF1-208ENST00000613138 CWF19L1Q69YN2 538 aaKnown RBP13.51□□□□□ -0.25
CSTF1-208ENST00000613138 VITQ6UXI7 678 aa13.51□□□□□ -0.25
CSTF1-208ENST00000613138 C12orf29Q8N999 325 aa13.51□□□□□ -0.25
CSTF1-208ENST00000613138 B3GALNT2Q8NCR0 500 aa13.51□□□□□ -0.25
CSTF1-208ENST00000613138 FLCNQ8NFG4 579 aa13.51□□□□□ -0.25
CSTF1-208ENST00000613138 RIN3Q8TB24 985 aa13.51□□□□□ -0.25
CSTF1-208ENST00000613138 MYCBPAPQ8TBZ2 947 aa13.51□□□□□ -0.25
CSTF1-208ENST00000613138 SPATA18Q8TC71 538 aa13.51□□□□□ -0.25
CSTF1-208ENST00000613138 GPT2Q8TD30 523 aa13.51□□□□□ -0.25
CSTF1-208ENST00000613138 C2orf15Q8WU43 125 aaKnown RBP13.51□□□□□ -0.25
CSTF1-208ENST00000613138 DHTKD1Q96HY7 919 aaPredicted RBP13.51□□□□□ -0.25
CSTF1-208ENST00000613138 CLSTN2Q9H4D0 955 aa13.51□□□□□ -0.25
CSTF1-208ENST00000613138 FAM49BQ9NUQ9 324 aa13.51□□□□□ -0.25
CSTF1-208ENST00000613138 GDE1Q9NZC3 331 aa13.51□□□□□ -0.25
CSTF1-208ENST00000613138 HSFX1Q9UBD0 423 aa13.51□□□□□ -0.25
CSTF1-208ENST00000613138 MAGEC2Q9UBF1 373 aaPredicted RBP13.51□□□□□ -0.25
CSTF1-208ENST00000613138 FBXL21Q9UKT6 434 aa13.51□□□□□ -0.25
CSTF1-208ENST00000613138 F8VP50 259 aa13.5□□□□□ -0.25
CSTF1-208ENST00000613138 SLC16A3O15427 465 aaKnown RBP13.5□□□□□ -0.25
CSTF1-208ENST00000613138 F11P03951 625 aa13.5□□□□□ -0.25
CSTF1-208ENST00000613138 SRFP11831 508 aa13.5□□□□□ -0.25
CSTF1-208ENST00000613138 GRIK1P39086 918 aa13.5□□□□□ -0.25
CSTF1-208ENST00000613138 MXI1P50539 228 aa13.5□□□□□ -0.25
CSTF1-208ENST00000613138 NLRP12P59046 1061 aa13.5□□□□□ -0.25
CSTF1-208ENST00000613138 MCCD1P59942 119 aaPredicted RBP13.5□□□□□ -0.25
CSTF1-208ENST00000613138 LRRC63Q05C16 580 aa13.5□□□□□ -0.25
CSTF1-208ENST00000613138 IFRD2Q12894 506 aaPredicted RBP13.5□□□□□ -0.25
CSTF1-208ENST00000613138 LRMPQ12912 555 aa13.5□□□□□ -0.25
CSTF1-208ENST00000613138 VEPH1Q14D04 833 aa13.5□□□□□ -0.25
CSTF1-208ENST00000613138 SGSM1Q2NKQ1 1148 aa13.5□□□□□ -0.25
CSTF1-208ENST00000613138 CFAP221Q4G0U5 840 aa13.5□□□□□ -0.25
CSTF1-208ENST00000613138 KRT39Q6A163 491 aa13.5□□□□□ -0.25
CSTF1-208ENST00000613138 TXNDC8Q6A555 127 aa13.5□□□□□ -0.25
CSTF1-208ENST00000613138 CLEC17AQ6ZS10 378 aa13.5□□□□□ -0.25
CSTF1-208ENST00000613138 FBXL6Q8N531 539 aa13.5□□□□□ -0.25
CSTF1-208ENST00000613138 TMEM105Q8N8V8 129 aa13.5□□□□□ -0.25
CSTF1-208ENST00000613138 WHAMMQ8TF30 809 aa13.5□□□□□ -0.25
CSTF1-208ENST00000613138 SLC35C1Q96A29 364 aa13.5□□□□□ -0.25
CSTF1-208ENST00000613138 ZFYVE19Q96K21 471 aa13.5□□□□□ -0.25
CSTF1-208ENST00000613138 SLC22A12Q96S37 553 aa13.5□□□□□ -0.25
CSTF1-208ENST00000613138 KCNK16Q96T55 309 aa13.5□□□□□ -0.25
CSTF1-208ENST00000613138 SLC46A2Q9BY10 475 aa13.5□□□□□ -0.25
CSTF1-208ENST00000613138 BCO2Q9BYV7 579 aa13.5□□□□□ -0.25
CSTF1-208ENST00000613138 ELOVL4Q9GZR5 314 aa13.5□□□□□ -0.25
CSTF1-208ENST00000613138 CCL26Q9Y258 94 aa13.5□□□□□ -0.25
CSTF1-208ENST00000613138 ASB3Q9Y575 518 aa13.5□□□□□ -0.25
CSTF1-208ENST00000613138 ZFP37Q9Y6Q3 630 aaPredicted RBP13.5□□□□□ -0.25
CSTF1-208ENST00000613138 CACNA1IQ9P0X4 2223 aa13.49□□□□□ -0.25
CSTF1-208ENST00000613138 HEPACAM2A8MVW5 462 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms