RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 PHF11Q9UIL8 331 aa12.86□□□□□ -0.35
HLCS-207ENST00000612277 PNMA8BQ9ULN7 279 aaPredicted RBP12.86□□□□□ -0.35
HLCS-207ENST00000612277 KPNA5O15131 536 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 CDK17Q00537 523 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 VAC14Q08AM6 782 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 TRAP1Q12931 704 aaKnown RBP12.85□□□□□ -0.35
HLCS-207ENST00000612277 ULK3Q6PHR2 472 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 RNF19BQ6ZMZ0 732 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 CATSPER4Q7RTX7 472 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 C11orf96Q7Z7L8 435 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 ATPAF2Q8N5M1 289 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 FNIP1Q8TF40 1166 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 RASSF5Q8WWW0 418 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 CCSER1Q9C0I3 900 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 POLD4Q9HCU8 107 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 A0A087WXM4 84 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 RALAP11233 206 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 ATP4AP20648 1035 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 RFC5P40937 340 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 ARHGDIBP52566 201 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 ITGA8P53708 1063 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 ORC2Q13416 577 aaPredicted RBP12.85□□□□□ -0.35
HLCS-207ENST00000612277 BTBD8Q5XKL5 378 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 SLC35G2Q8TBE7 412 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 FAM172AQ8WUF8 416 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 RBM12Q9NTZ6 932 aaKnown RBP12.85□□□□□ -0.35
HLCS-207ENST00000612277 NMRK1Q9NWW6 199 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 C15orf41Q9Y2V0 281 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 WBP11Q9Y2W2 641 aaKnown RBP12.85□□□□□ -0.35
HLCS-207ENST00000612277 STX11O75558 287 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 FAM98BQ52LJ0 330 aaKnown RBP12.85□□□□□ -0.35
HLCS-207ENST00000612277 SH3BP4Q9P0V3 963 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 ENOPH1Q9UHY7 261 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 FHOD1Q9Y613 1164 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 GNB5O14775 395 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 GLRA3O75311 464 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 CCNA2P20248 432 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 HNMTP50135 292 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 RHAGQ02094 409 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 SCRN3Q0VDG4 424 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 ESRP1Q6NXG1 681 aaKnown RBP12.85□□□□□ -0.35
HLCS-207ENST00000612277 GIMAP8Q8ND71 665 aaPredicted RBP12.85□□□□□ -0.35
HLCS-207ENST00000612277 ZNF333Q96JL9 665 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 KLHL32Q96NJ5 620 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 CAMKK2Q96RR4 588 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 NUAK2Q9H093 628 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.85□□□□□ -0.35
HLCS-207ENST00000612277 BAIAP2Q9UQB8 552 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 NUP160Q12769 1436 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 CLOCKO15516 846 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 NFICP08651 508 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 LCP1P13796 627 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 NPR3P17342 541 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 GPR1P46091 355 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 SCNN1DP51172 638 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 ARF3P61204 181 aaPredicted RBP12.85□□□□□ -0.35
HLCS-207ENST00000612277 ARF1P84077 181 aaKnown RBP12.85□□□□□ -0.35
HLCS-207ENST00000612277 FAPQ12884 760 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 FAM83EQ2M2I3 478 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 PGS1Q32NB8 556 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 THOC7Q6I9Y2 204 aaKnown RBP12.85□□□□□ -0.35
HLCS-207ENST00000612277 UBN2Q6ZU65 1347 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 CENPIQ92674 756 aaPredicted RBP12.85□□□□□ -0.35
HLCS-207ENST00000612277 TMEM165Q9HC07 324 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 TMEM138Q9NPI0 162 aa12.85□□□□□ -0.35
HLCS-207ENST00000612277 ABCC1P33527 1531 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 TEX33O43247 280 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 CHP2O43745 196 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 CBFA2T3O75081 653 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 CYP21A2P08686 494 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 CENPCQ03188 943 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 HSF2Q03933 536 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 RBBP4Q09028 425 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 TAF5Q15542 800 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 CCDC153Q494R4 210 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 C4orf22Q6V702 233 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 AKAP14Q86UN6 197 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 FAM228AQ86W67 206 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 LRRC6Q86X45 466 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 FAM9CQ8IZT9 166 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 GPD1LQ8N335 351 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 ZNF671Q8TAW3 534 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 TMEM120AQ9BXJ8 343 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 NPATQ14207 1427 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 NR5A2O00482 541 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 LBPP18428 481 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 TIMM50Q3ZCQ8 353 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 ATP6AP1LQ52LC2 224 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 PDPK2PQ6A1A2 396 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.84□□□□□ -0.35
HLCS-207ENST00000612277 POC5Q8NA72 575 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 KCNB2Q92953 911 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 TJP2Q9UDY2 1190 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 CCNL1Q9UK58 526 aaPredicted RBP12.84□□□□□ -0.35
HLCS-207ENST00000612277 ARHGAP31Q2M1Z3 1444 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 MROH7Q68CQ1 1323 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 PNMA6FA0A0J9YX94 578 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 HEATR9A2RTY3 570 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 CHL1O00533 1208 aa12.84□□□□□ -0.35
HLCS-207ENST00000612277 BMP3P12645 472 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms