RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 C4orf33Q8N1A6 199 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 ZNF710Q8N1W2 664 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 BSNDQ8WZ55 320 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 SLITRK1Q96PX8 696 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 CYTH2Q99418 400 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 SARS2Q9NP81 518 aaKnown RBP7.61□□□□□ -1.19
CSDE1-218ENST00000610726 ITGA11Q9UKX5 1188 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 RRP15Q9Y3B9 282 aaKnown RBP7.61□□□□□ -1.19
CSDE1-218ENST00000610726 NRCAMQ92823 1304 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 MYO9BQ13459 2157 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 CCDC195A0A1B0GUA6 201 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 CCDC160A6NGH7 325 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 LYPLA2O95372 231 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 SMIM10L2AP0DMW4 78 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 SMIM10L2BP0DMW5 78 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 KITP10721 976 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 SKIP12755 728 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 NCF2P19878 526 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-218ENST00000610726 MAGEA4P43358 317 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 HNRNPH2P55795 449 aaKnown RBP7.61□□□□□ -1.19
CSDE1-218ENST00000610726 SESN3P58005 492 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 OTUD4Q01804 1114 aaKnown RBP7.61□□□□□ -1.19
CSDE1-218ENST00000610726 STAT4Q14765 748 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 TDRD10Q5VZ19 366 aaKnown RBP7.61□□□□□ -1.19
CSDE1-218ENST00000610726 C3orf62Q6ZUJ4 267 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 ATPAF2Q8N5M1 289 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 SHCBP1Q8NEM2 672 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 HDAC7Q8WUI4 952 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 C7orf43Q8WVR3 580 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 TMEM121Q9BTD3 319 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 WDCPQ9H6R7 721 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 USP18Q9UMW8 372 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 GMNCA6NCL1 334 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 C3orf70A6NLC5 250 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-218ENST00000610726 CLGNO14967 610 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 PSTPIP1O43586 416 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 CDH16O75309 829 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 BAG2O95816 211 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 TPD52P55327 224 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-218ENST00000610726 PTENP60484 403 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 NR1H3Q13133 447 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 PCSK7Q16549 785 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 PTGISQ16647 500 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 BMT2Q1RMZ1 405 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 CHSY1Q86X52 802 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 CCNYL1Q8N7R7 359 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.61□□□□□ -1.191e-7■■■■□ 24.2
CSDE1-218ENST00000610726 GPR20Q99678 358 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 ACO2Q99798 780 aaKnown RBP7.61□□□□□ -1.19
CSDE1-218ENST00000610726 ADAM2Q99965 735 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 TRIM56Q9BRZ2 755 aaKnown RBP7.61□□□□□ -1.19
CSDE1-218ENST00000610726 CNPY3Q9BT09 278 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 SMYD3Q9H7B4 428 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 NMRK2Q9NPI5 230 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 ATP11BQ9Y2G3 1177 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 SOWAHBA6NEL2 793 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 KPNA7A9QM74 516 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 LSM8O95777 96 aaKnown RBP7.6□□□□□ -1.19
CSDE1-218ENST00000610726 PYGMP11217 842 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 FNTAP49354 379 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 FLT3LGP49771 235 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 KPNA2P52292 529 aaKnown RBP7.6□□□□□ -1.19
CSDE1-218ENST00000610726 CENPCQ03188 943 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 C1QBPQ07021 282 aaKnown RBP7.6□□□□□ -1.19
CSDE1-218ENST00000610726 BFSP2Q13515 415 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 PDK1Q15118 436 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 MAPRE1Q15691 268 aaKnown RBP7.6□□□□□ -1.19
CSDE1-218ENST00000610726 ZACNQ401N2 412 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 TFDP3Q5H9I0 405 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 ACTL9Q8TC94 416 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 SLC2A14Q8TDB8 520 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 ACTRT1Q8TDG2 376 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 GANCQ8TET4 914 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 EDEM1Q92611 657 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 KRT35Q92764 455 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 SYT15Q9BQS2 421 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 RNF208Q9H0X6 261 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 PAK5Q9P286 719 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 TSR3Q9UJK0 312 aaKnown RBP7.6□□□□□ -1.19
CSDE1-218ENST00000610726 TNFSF13BQ9Y275 285 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 MROH7Q68CQ1 1323 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 ARFGEF2Q9Y6D5 1785 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 LRP6O75581 1613 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 CASZ1Q86V15 1759 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 UBA6A0AVT1 1052 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-218ENST00000610726 CFAP69A5D8W1 941 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 M0R2N6 131 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 HSPA4LO95757 839 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 S100BP04271 92 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-218ENST00000610726 PRKCIP41743 596 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 TKTL1P51854 596 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 NCKAP1LP55160 1127 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 FKBP1BP68106 108 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 SP3Q02447 781 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 FAM110CQ1W6H9 321 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 DEFB115Q30KQ5 88 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 CTXN3Q4LDR2 81 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 ATG16L1Q676U5 607 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 IL31Q6EBC2 164 aa7.6□□□□□ -1.19
CSDE1-218ENST00000610726 KLC3Q6P597 504 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms