RNA–Protein interactions for RNA: ENST00000609959.1

CCDC144B-206, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 5

Gene CCDC144B, Length 808 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-206ENST00000609959 GABRDO14764 452 aa4.13□□□□□ -1.75
CCDC144B-206ENST00000609959 USP1O94782 785 aa4.13□□□□□ -1.75
CCDC144B-206ENST00000609959 NPSP0C0P6 89 aa4.13□□□□□ -1.75
CCDC144B-206ENST00000609959 MALP21145 153 aa4.13□□□□□ -1.75
CCDC144B-206ENST00000609959 IL1R2P27930 398 aa4.13□□□□□ -1.75
CCDC144B-206ENST00000609959 CDKN1CP49918 316 aaPredicted RBP4.13□□□□□ -1.75
CCDC144B-206ENST00000609959 LINC00205P59089 165 aa4.13□□□□□ -1.75
CCDC144B-206ENST00000609959 ITKQ08881 620 aa4.13□□□□□ -1.75
CCDC144B-206ENST00000609959 HABP2Q14520 560 aaPredicted RBP4.13□□□□□ -1.75
CCDC144B-206ENST00000609959 CCDC93Q567U6 631 aa4.13□□□□□ -1.75
CCDC144B-206ENST00000609959 DLK2Q6UY11 383 aa4.13□□□□□ -1.75
CCDC144B-206ENST00000609959 NAPRTQ6XQN6 538 aa4.13□□□□□ -1.75
CCDC144B-206ENST00000609959 GALNT4Q8N4A0 578 aa4.13□□□□□ -1.75
CCDC144B-206ENST00000609959 FAM109AQ8N4B1 249 aa4.13□□□□□ -1.75
CCDC144B-206ENST00000609959 LRRC71Q8N4P6 559 aa4.13□□□□□ -1.75
CCDC144B-206ENST00000609959 NRACQ8N912 160 aa4.13□□□□□ -1.75
CCDC144B-206ENST00000609959 NSUN6Q8TEA1 469 aaKnown RBP4.13□□□□□ -1.75
CCDC144B-206ENST00000609959 LYZL4Q96KX0 146 aa4.13□□□□□ -1.75
CCDC144B-206ENST00000609959 SPC25Q9HBM1 224 aa4.13□□□□□ -1.75
CCDC144B-206ENST00000609959 DUSP22Q9NRW4 184 aa4.13□□□□□ -1.75
CCDC144B-206ENST00000609959 ETAA1Q9NY74 926 aa4.13□□□□□ -1.75
CCDC144B-206ENST00000609959 LRRC14BA6NHZ5 514 aa4.12□□□□□ -1.75
CCDC144B-206ENST00000609959 ZNF785A8K8V0 405 aa4.12□□□□□ -1.75
CCDC144B-206ENST00000609959 H7C1Q1 480 aa4.12□□□□□ -1.75
CCDC144B-206ENST00000609959 PPM1DO15297 605 aa4.12□□□□□ -1.75
CCDC144B-206ENST00000609959 KATNA1O75449 491 aa4.12□□□□□ -1.75
CCDC144B-206ENST00000609959 CHRM5P08912 532 aaPredicted RBP4.12□□□□□ -1.75
CCDC144B-206ENST00000609959 HMGB1P09429 215 aaKnown RBP4.12□□□□□ -1.75
CCDC144B-206ENST00000609959 GUCY2FP51841 1108 aa4.12□□□□□ -1.75
CCDC144B-206ENST00000609959 PDE1AP54750 535 aa4.12□□□□□ -1.75
CCDC144B-206ENST00000609959 PSMC1P62191 440 aaKnown RBP4.12□□□□□ -1.75
CCDC144B-206ENST00000609959 ICE2Q659A1 982 aa4.12□□□□□ -1.75
CCDC144B-206ENST00000609959 PARS2Q7L3T8 475 aaKnown RBP4.12□□□□□ -1.75
CCDC144B-206ENST00000609959 RP9Q8TA86 221 aaKnown RBP4.12□□□□□ -1.75
CCDC144B-206ENST00000609959 CYP2W1Q8TAV3 490 aa4.12□□□□□ -1.75
CCDC144B-206ENST00000609959 C1orf43Q9BWL3 253 aa4.12□□□□□ -1.75
CCDC144B-206ENST00000609959 SMOC2Q9H3U7 446 aa4.12□□□□□ -1.75
CCDC144B-206ENST00000609959 ADAMTS5Q9UNA0 930 aa4.12□□□□□ -1.75
CCDC144B-206ENST00000609959 AGAP1Q9UPQ3 857 aa4.12□□□□□ -1.75
CCDC144B-206ENST00000609959 NOTCH4Q99466 2003 aa4.11□□□□□ -1.75
CCDC144B-206ENST00000609959 SHTN1A0MZ66 631 aa4.11□□□□□ -1.75
CCDC144B-206ENST00000609959 FAM90A8PA6NJQ4 464 aa4.11□□□□□ -1.75
CCDC144B-206ENST00000609959 DSCR3O14972 297 aa4.11□□□□□ -1.75
CCDC144B-206ENST00000609959 GJB1P08034 283 aa4.11□□□□□ -1.75
CCDC144B-206ENST00000609959 FAM90A13PP0C7W8 464 aa4.11□□□□□ -1.75
CCDC144B-206ENST00000609959 FAM90A24PP0C7X0 464 aa4.11□□□□□ -1.75
CCDC144B-206ENST00000609959 ENGP17813 658 aa4.11□□□□□ -1.75
CCDC144B-206ENST00000609959 ATP5F1P24539 256 aaPredicted RBP4.11□□□□□ -1.75
CCDC144B-206ENST00000609959 PHKA1P46020 1223 aa4.11□□□□□ -1.75
CCDC144B-206ENST00000609959 EVA1CP58658 441 aa4.11□□□□□ -1.75
CCDC144B-206ENST00000609959 CYP4F2P78329 520 aa4.11□□□□□ -1.75
CCDC144B-206ENST00000609959 HTRA4P83105 476 aaPredicted RBP4.11□□□□□ -1.75
CCDC144B-206ENST00000609959 FAM50AQ14320 339 aaKnown RBP4.11□□□□□ -1.75
CCDC144B-206ENST00000609959 SEMA3AQ14563 771 aa4.11□□□□□ -1.75
CCDC144B-206ENST00000609959 UAP1L1Q3KQV9 507 aa4.11□□□□□ -1.75
CCDC144B-206ENST00000609959 TREML2Q5T2D2 321 aa4.11□□□□□ -1.75
CCDC144B-206ENST00000609959 SLC4A10Q6U841 1118 aa4.11□□□□□ -1.75
CCDC144B-206ENST00000609959 TTC7BQ86TV6 843 aa4.11□□□□□ -1.75
CCDC144B-206ENST00000609959 ACRBPQ8NEB7 543 aa4.11□□□□□ -1.75
CCDC144B-206ENST00000609959 COQ8BQ96D53 544 aa4.11□□□□□ -1.75
CCDC144B-206ENST00000609959 MTMR8Q96EF0 704 aa4.11□□□□□ -1.75
CCDC144B-206ENST00000609959 VCPIP1Q96JH7 1222 aa4.11□□□□□ -1.75
CCDC144B-206ENST00000609959 GPR35Q9HC97 309 aa4.11□□□□□ -1.75
CCDC144B-206ENST00000609959 SLAMF7Q9NQ25 335 aa4.11□□□□□ -1.75
CCDC144B-206ENST00000609959 PI4KBQ9UBF8 816 aa4.11□□□□□ -1.75
CCDC144B-206ENST00000609959 CCNL1Q9UK58 526 aaPredicted RBP4.11□□□□□ -1.75
CCDC144B-206ENST00000609959 TNKSO95271 1327 aa4.11□□□□□ -1.75
CCDC144B-206ENST00000609959 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.1□□□□□ -1.75
CCDC144B-206ENST00000609959 CD8B2A6NJW9 211 aa4.1□□□□□ -1.75
CCDC144B-206ENST00000609959 VPS4BO75351 444 aa4.1□□□□□ -1.75
CCDC144B-206ENST00000609959 IL6RP08887 468 aaPredicted RBP4.1□□□□□ -1.75
CCDC144B-206ENST00000609959 CHRM3P20309 590 aa4.1□□□□□ -1.75
CCDC144B-206ENST00000609959 CDK11BP21127 795 aaKnown RBP4.1□□□□□ -1.75
CCDC144B-206ENST00000609959 SMARCA1P28370 1054 aa4.1□□□□□ -1.75
CCDC144B-206ENST00000609959 GCLCP48506 637 aaPredicted RBP4.1□□□□□ -1.75
CCDC144B-206ENST00000609959 THBS3P49746 956 aa4.1□□□□□ -1.75
CCDC144B-206ENST00000609959 TOB1P50616 345 aaPredicted RBP4.1□□□□□ -1.75
CCDC144B-206ENST00000609959 ZNF135P52742 658 aaPredicted RBP4.1□□□□□ -1.75
CCDC144B-206ENST00000609959 KRT85P78386 507 aa4.1□□□□□ -1.75
CCDC144B-206ENST00000609959 RBMS2Q15434 407 aaKnown RBP4.1□□□□□ -1.75
CCDC144B-206ENST00000609959 NPY5RQ15761 445 aa4.1□□□□□ -1.75
CCDC144B-206ENST00000609959 VPS53Q5VIR6 699 aa4.1□□□□□ -1.75
CCDC144B-206ENST00000609959 EFCAB2Q5VUJ9 269 aa4.1□□□□□ -1.75
CCDC144B-206ENST00000609959 MTHFD1LQ6UB35 978 aa4.1□□□□□ -1.75
CCDC144B-206ENST00000609959 PNMA8AQ86V59 439 aaPredicted RBP4.1□□□□□ -1.75
CCDC144B-206ENST00000609959 DDX17Q92841 729 aaKnown RBP4.1□□□□□ -1.75
CCDC144B-206ENST00000609959 FSD1LQ9BXM9 530 aa4.1□□□□□ -1.75
CCDC144B-206ENST00000609959 TMX1Q9H3N1 280 aa4.1□□□□□ -1.75
CCDC144B-206ENST00000609959 SERHLQ9NQF3 203 aa4.1□□□□□ -1.75
CCDC144B-206ENST00000609959 KLHL13Q9P2N7 655 aa4.1□□□□□ -1.75
CCDC144B-206ENST00000609959 PCDHA3Q9Y5H8 950 aa4.1□□□□□ -1.75
CCDC144B-206ENST00000609959 MRFAP1Q9Y605 127 aa4.1□□□□□ -1.75
CCDC144B-206ENST00000609959 CFAP20Q9Y6A4 193 aaKnown RBP4.1□□□□□ -1.75
CCDC144B-206ENST00000609959 ZRANB2O95218 330 aaKnown RBP eCLIP4.09□□□□□ -1.75
CCDC144B-206ENST00000609959 KIF20AO95235 890 aa4.09□□□□□ -1.75
CCDC144B-206ENST00000609959 ALPLP05186 524 aa4.09□□□□□ -1.75
CCDC144B-206ENST00000609959 DLDP09622 509 aaKnown RBP4.09□□□□□ -1.75
CCDC144B-206ENST00000609959 PRDX5P30044 214 aa4.09□□□□□ -1.75
CCDC144B-206ENST00000609959 ADKP55263 362 aaKnown RBP4.09□□□□□ -1.75
CCDC144B-206ENST00000609959 GHRHRQ02643 423 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms