RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 SPACA7Q96KW9 195 aa6.78□□□□□ -1.32
CUX1-220ENST00000607092 ACBD6Q9BR61 282 aa6.78□□□□□ -1.32
CUX1-220ENST00000607092 PYM1Q9BRP8 204 aaKnown RBP6.78□□□□□ -1.32
CUX1-220ENST00000607092 SLC46A2Q9BY10 475 aa6.78□□□□□ -1.32
CUX1-220ENST00000607092 DUSP15Q9H1R2 295 aaPredicted RBP6.78□□□□□ -1.32
CUX1-220ENST00000607092 ST6GALNAC4Q9H4F1 302 aa6.78□□□□□ -1.32
CUX1-220ENST00000607092 POLD4Q9HCU8 107 aa6.78□□□□□ -1.32
CUX1-220ENST00000607092 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.78□□□□□ -1.32
CUX1-220ENST00000607092 DUS2Q9NX74 493 aaKnown RBP6.78□□□□□ -1.32
CUX1-220ENST00000607092 ABI2Q9NYB9 513 aaPredicted RBP6.78□□□□□ -1.32
CUX1-220ENST00000607092 CPSF3Q9UKF6 684 aaKnown RBP6.78□□□□□ -1.32
CUX1-220ENST00000607092 EXOC7Q9UPT5 735 aa6.78□□□□□ -1.32
CUX1-220ENST00000607092 NUP210Q8TEM1 1887 aaPredicted RBP6.78□□□□□ -1.32
CUX1-220ENST00000607092 GREB1Q4ZG55 1949 aa6.78□□□□□ -1.32
CUX1-220ENST00000607092 COL4A3Q01955 1670 aa6.77□□□□□ -1.32
CUX1-220ENST00000607092 FRYQ5TBA9 3013 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 SFI1A8K8P3 1242 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 KPNA7A9QM74 516 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.77□□□□□ -1.33
CUX1-220ENST00000607092 ZBTB24O43167 697 aaPredicted RBP6.77□□□□□ -1.33
CUX1-220ENST00000607092 PRPF40AO75400 957 aaKnown RBP6.77□□□□□ -1.33
CUX1-220ENST00000607092 VNN2O95498 520 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 F11P03951 625 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 ATF6P18850 670 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 FECHP22830 423 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 GJA4P35212 333 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 EIF2DP41214 584 aaKnown RBP6.77□□□□□ -1.33
CUX1-220ENST00000607092 LHX1P48742 406 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 GALK1P51570 392 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 CLCN6P51797 869 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 ZNF131P52739 623 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 SLC12A3P55017 1021 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 NLRP12P59046 1061 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 MRPS21P82921 87 aaKnown RBP6.77□□□□□ -1.33
CUX1-220ENST00000607092 CYP4F8P98187 520 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 ATP2C1P98194 919 aaPredicted RBP6.77□□□□□ -1.33
CUX1-220ENST00000607092 GTF2BQ00403 316 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 SPAG1Q07617 926 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 TNK2Q07912 1038 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 RAD51AP2Q09MP3 1159 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 ZNF252P-AS1Q0IIN9 211 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 ALCAMQ13740 583 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 DMC1Q14565 340 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 CFAP221Q4G0U5 840 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 SEZ6Q53EL9 994 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 ADALQ6DHV7 355 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 JADE1Q6IE81 842 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 FSTL4Q6MZW2 842 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 UNQ6494/PRO21346Q6UXR6 183 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 DPH6Q7L8W6 267 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 CYP2U1Q7Z449 544 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 GPBP1Q86WP2 473 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 LRRC52Q8N7C0 313 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 MAB21L3Q8N8X9 362 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 KDF1Q8NAX2 398 aaPredicted RBP6.77□□□□□ -1.33
CUX1-220ENST00000607092 OR10T2Q8NGX3 314 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 TTC8Q8TAM2 541 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 OSCP1Q8WVF1 389 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 USP13Q92995 863 aaPredicted RBP6.77□□□□□ -1.33
CUX1-220ENST00000607092 CNOT6LQ96LI5 555 aaKnown RBP6.77□□□□□ -1.33
CUX1-220ENST00000607092 MYRFLQ96LU7 910 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 NUSAP1Q9BXS6 441 aaKnown RBP6.77□□□□□ -1.33
CUX1-220ENST00000607092 CRISPLD1Q9H336 500 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 EBF3Q9H4W6 596 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 ECT2Q9H8V3 914 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 IL21Q9HBE4 155 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 HPS4Q9NQG7 708 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 RXFP3Q9NSD7 469 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 DPP3Q9NY33 737 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 SEL1LQ9UBV2 794 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 EVLQ9UI08 416 aaPredicted RBP6.77□□□□□ -1.33
CUX1-220ENST00000607092 AGO2Q9UKV8 859 aaKnown RBP6.77□□□□□ -1.33
CUX1-220ENST00000607092 PCDHB6Q9Y5E3 794 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 AKAP13Q12802 2813 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 ACACAQ13085 2346 aa6.77□□□□□ -1.33
CUX1-220ENST00000607092 NCANO14594 1321 aa6.76□□□□□ -1.33
CUX1-220ENST00000607092 VWA3AA6NCI4 1184 aa6.76□□□□□ -1.33
CUX1-220ENST00000607092 MYMKA6NI61 221 aa6.76□□□□□ -1.33
CUX1-220ENST00000607092 C4orf47A7E2U8 309 aa6.76□□□□□ -1.33
CUX1-220ENST00000607092 H3BQV1 296 aa6.76□□□□□ -1.33
CUX1-220ENST00000607092 NRG2O14511 850 aaPredicted RBP6.76□□□□□ -1.33
CUX1-220ENST00000607092 TNFRSF10BO14763 440 aa6.76□□□□□ -1.33
CUX1-220ENST00000607092 KIAA0391O15091 583 aaKnown RBP6.76□□□□□ -1.33
CUX1-220ENST00000607092 MEFVO15553 781 aaPredicted RBP6.76□□□□□ -1.33
CUX1-220ENST00000607092 FAM189A1O60320 539 aa6.76□□□□□ -1.33
CUX1-220ENST00000607092 NOL4O94818 638 aa6.76□□□□□ -1.33
CUX1-220ENST00000607092 HMGA1P17096 107 aaKnown RBP6.76□□□□□ -1.33
CUX1-220ENST00000607092 LONP1P36776 959 aaKnown RBP6.76□□□□□ -1.33
CUX1-220ENST00000607092 TNFSF9P41273 254 aa6.76□□□□□ -1.33
CUX1-220ENST00000607092 MAGEA11P43364 429 aa6.76□□□□□ -1.33
CUX1-220ENST00000607092 ATXN3P54252 364 aaPredicted RBP6.76□□□□□ -1.33
CUX1-220ENST00000607092 MYO1EQ12965 1108 aa6.76□□□□□ -1.33
CUX1-220ENST00000607092 PSMD2Q13200 908 aa6.76□□□□□ -1.33
CUX1-220ENST00000607092 SURF1Q15526 300 aa6.76□□□□□ -1.33
CUX1-220ENST00000607092 TMEM119Q4V9L6 283 aa6.76□□□□□ -1.33
CUX1-220ENST00000607092 PMS2CLQ68D20 193 aa6.76□□□□□ -1.33
CUX1-220ENST00000607092 MCTP1Q6DN14 999 aa6.76□□□□□ -1.33
CUX1-220ENST00000607092 VSTM1Q6UX27 236 aa6.76□□□□□ -1.33
CUX1-220ENST00000607092 LPCAT2Q7L5N7 544 aa6.76□□□□□ -1.33
CUX1-220ENST00000607092 TRMT11Q7Z4G4 463 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms