RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 ANKRD36BP1Q96IX9 119 aa14.32□□□□□ -0.12
CTSA-213ENST00000606782 FAM84AQ96KN4 292 aa14.32□□□□□ -0.12
CTSA-213ENST00000606782 GTPBP4Q9BZE4 634 aaKnown RBP14.32□□□□□ -0.12
CTSA-213ENST00000606782 MTMR12Q9C0I1 747 aa14.32□□□□□ -0.12
CTSA-213ENST00000606782 PRMT8Q9NR22 394 aaPredicted RBP14.32□□□□□ -0.12
CTSA-213ENST00000606782 DDX43Q9NXZ2 648 aaKnown RBP14.32□□□□□ -0.12
CTSA-213ENST00000606782 ABI2Q9NYB9 513 aaPredicted RBP14.32□□□□□ -0.12
CTSA-213ENST00000606782 TMEM63CQ9P1W3 806 aa14.32□□□□□ -0.12
CTSA-213ENST00000606782 MAN1B1Q9UKM7 699 aa14.32□□□□□ -0.12
CTSA-213ENST00000606782 PIAS3Q9Y6X2 628 aa14.32□□□□□ -0.12
CTSA-213ENST00000606782 PTPRJQ12913 1337 aa14.32□□□□□ -0.12
CTSA-213ENST00000606782 DENND4CQ5VZ89 1909 aa14.31□□□□□ -0.12
CTSA-213ENST00000606782 TICRRQ7Z2Z1 1910 aa14.31□□□□□ -0.12
CTSA-213ENST00000606782 CEP250Q9BV73 2442 aa14.31□□□□□ -0.12
CTSA-213ENST00000606782 FAM163BP0C2L3 166 aa14.31□□□□□ -0.12
CTSA-213ENST00000606782 TMEM191BP0C7N4 346 aa14.31□□□□□ -0.12
CTSA-213ENST00000606782 DDX6P26196 483 aaKnown RBP eCLIP14.31□□□□□ -0.12
CTSA-213ENST00000606782 BFSP1Q12934 665 aa14.31□□□□□ -0.12
CTSA-213ENST00000606782 MYO1EQ12965 1108 aa14.31□□□□□ -0.12
CTSA-213ENST00000606782 MORC3Q14149 939 aa14.31□□□□□ -0.12
CTSA-213ENST00000606782 CFAP221Q4G0U5 840 aa14.31□□□□□ -0.12
CTSA-213ENST00000606782 COBLL1Q53SF7 1204 aa14.31□□□□□ -0.12
CTSA-213ENST00000606782 CCDC183Q5T5S1 534 aa14.31□□□□□ -0.12
CTSA-213ENST00000606782 FAM171BQ6P995 826 aa14.31□□□□□ -0.12
CTSA-213ENST00000606782 OSTM1Q86WC4 334 aa14.31□□□□□ -0.12
CTSA-213ENST00000606782 WDR49Q8IV35 697 aa14.31□□□□□ -0.12
CTSA-213ENST00000606782 C12orf56Q8IXR9 622 aa14.31□□□□□ -0.12
CTSA-213ENST00000606782 SUMF1Q8NBK3 374 aa14.31□□□□□ -0.12
CTSA-213ENST00000606782 KIAA0895Q8NCT3 520 aa14.31□□□□□ -0.12
CTSA-213ENST00000606782 FAM200AQ8TCP9 573 aa14.31□□□□□ -0.12
CTSA-213ENST00000606782 GIPC2Q8TF65 315 aa14.31□□□□□ -0.12
CTSA-213ENST00000606782 FUBP3Q96I24 572 aaKnown RBP eCLIP14.31□□□□□ -0.12
CTSA-213ENST00000606782 MYRFLQ96LU7 910 aa14.31□□□□□ -0.12
CTSA-213ENST00000606782 SLC46A2Q9BY10 475 aa14.31□□□□□ -0.12
CTSA-213ENST00000606782 FAM126AQ9BYI3 521 aaPredicted RBP14.31□□□□□ -0.12
CTSA-213ENST00000606782 C8orf33Q9H7E9 229 aaPredicted RBP14.31□□□□□ -0.12
CTSA-213ENST00000606782 AGPAT3Q9NRZ7 376 aa14.31□□□□□ -0.12
CTSA-213ENST00000606782 CGNQ9P2M7 1197 aaKnown RBP14.31□□□□□ -0.12
CTSA-213ENST00000606782 PCDHGA2Q9Y5H1 932 aa14.31□□□□□ -0.12
CTSA-213ENST00000606782 SNX9Q9Y5X1 595 aa14.31□□□□□ -0.12
CTSA-213ENST00000606782 MYBPHLA2RUH7 354 aa14.3□□□□□ -0.12
CTSA-213ENST00000606782 LILRB5O75023 590 aa14.3□□□□□ -0.12
CTSA-213ENST00000606782 PRAMEF12O95522 483 aa14.3□□□□□ -0.12
CTSA-213ENST00000606782 TNNC2P02585 160 aa14.3□□□□□ -0.12
CTSA-213ENST00000606782 KRT19P08727 400 aa14.3□□□□□ -0.12
CTSA-213ENST00000606782 CSH1P0DML2 217 aa14.3□□□□□ -0.12
CTSA-213ENST00000606782 CSH2P0DML3 217 aa14.3□□□□□ -0.12
CTSA-213ENST00000606782 CHRNB1P11230 501 aa14.3□□□□□ -0.12
CTSA-213ENST00000606782 BMP6P22004 513 aa14.3□□□□□ -0.12
CTSA-213ENST00000606782 PCSK1P29120 753 aa14.3□□□□□ -0.12
CTSA-213ENST00000606782 NLRP12P59046 1061 aa14.3□□□□□ -0.12
CTSA-213ENST00000606782 RPL10AP62906 217 aaKnown RBP14.3□□□□□ -0.12
CTSA-213ENST00000606782 PLCB2Q00722 1185 aa14.3□□□□□ -0.12
CTSA-213ENST00000606782 MTAPQ13126 283 aa14.3□□□□□ -0.12
CTSA-213ENST00000606782 PSMD6Q15008 389 aa14.3□□□□□ -0.12
CTSA-213ENST00000606782 RALGPS2Q86X27 583 aaPredicted RBP14.3□□□□□ -0.12
CTSA-213ENST00000606782 YAF2Q8IY57 180 aa14.3□□□□□ -0.12
CTSA-213ENST00000606782 ADGRF2Q8IZF7 708 aa14.3□□□□□ -0.12
CTSA-213ENST00000606782 CMTM8Q8IZV2 173 aa14.3□□□□□ -0.12
CTSA-213ENST00000606782 CELF5Q8N6W0 485 aaKnown RBP14.3□□□□□ -0.12
CTSA-213ENST00000606782 TRIML1Q8N9V2 468 aa14.3□□□□□ -0.12
CTSA-213ENST00000606782 BPIFB1Q8TDL5 484 aa14.3□□□□□ -0.12
CTSA-213ENST00000606782 TMEM174Q8WUU8 243 aa14.3□□□□□ -0.12
CTSA-213ENST00000606782 KBTBD7Q8WVZ9 684 aa14.3□□□□□ -0.12
CTSA-213ENST00000606782 TRMT2BQ96GJ1 504 aaKnown RBP14.3□□□□□ -0.12
CTSA-213ENST00000606782 HPDLQ96IR7 371 aa14.3□□□□□ -0.12
CTSA-213ENST00000606782 GCNAQ96QF7 691 aa14.3□□□□□ -0.12
CTSA-213ENST00000606782 PI4K2AQ9BTU6 479 aa14.3□□□□□ -0.12
CTSA-213ENST00000606782 LMAN1LQ9HAT1 526 aa14.3□□□□□ -0.12
CTSA-213ENST00000606782 ZSCAN32Q9NX65 697 aa14.3□□□□□ -0.12
CTSA-213ENST00000606782 GTF3C4Q9UKN8 822 aa14.3□□□□□ -0.12
CTSA-213ENST00000606782 CACNA1AO00555 2505 aa14.3□□□□□ -0.12
CTSA-213ENST00000606782 DPYSL4O14531 572 aa14.29□□□□□ -0.12
CTSA-213ENST00000606782 NOL4O94818 638 aa14.29□□□□□ -0.12
CTSA-213ENST00000606782 TDGF1P13385 188 aa14.29□□□□□ -0.12
CTSA-213ENST00000606782 CCNE1P24864 410 aa14.29□□□□□ -0.12
CTSA-213ENST00000606782 CYP2F1P24903 491 aa14.29□□□□□ -0.12
CTSA-213ENST00000606782 MAGEA11P43364 429 aa14.29□□□□□ -0.12
CTSA-213ENST00000606782 CYP4F8P98187 520 aa14.29□□□□□ -0.12
CTSA-213ENST00000606782 CSTF1Q05048 431 aaKnown RBP14.29□□□□□ -0.12
CTSA-213ENST00000606782 CYP24A1Q07973 514 aa14.29□□□□□ -0.12
CTSA-213ENST00000606782 TAF12Q16514 161 aa14.29□□□□□ -0.12
CTSA-213ENST00000606782 SNRNP35Q16560 246 aaKnown RBP14.29□□□□□ -0.12
CTSA-213ENST00000606782 LMBRD2Q68DH5 695 aaPredicted RBP14.29□□□□□ -0.12
CTSA-213ENST00000606782 ISM2Q6H9L7 571 aa14.29□□□□□ -0.12
CTSA-213ENST00000606782 CAVIN1Q6NZI2 390 aaKnown RBP14.29□□□□□ -0.12
CTSA-213ENST00000606782 TRAPPC11Q7Z392 1133 aa14.29□□□□□ -0.12
CTSA-213ENST00000606782 MON1AQ86VX9 555 aa14.29□□□□□ -0.12
CTSA-213ENST00000606782 XXYLT1Q8NBI6 393 aa14.29□□□□□ -0.12
CTSA-213ENST00000606782 CSGALNACT1Q8TDX6 532 aa14.29□□□□□ -0.12
CTSA-213ENST00000606782 CEP295NLQ96MC4 621 aa14.29□□□□□ -0.12
CTSA-213ENST00000606782 FAM83CQ9BQN1 747 aa14.29□□□□□ -0.12
CTSA-213ENST00000606782 GZF1Q9H116 711 aaPredicted RBP14.29□□□□□ -0.12
CTSA-213ENST00000606782 NDRG2Q9UN36 371 aaKnown RBP14.29□□□□□ -0.12
CTSA-213ENST00000606782 KIF26AQ9ULI4 1882 aaPredicted RBP14.29□□□□□ -0.12
CTSA-213ENST00000606782 PPP1R3GB7ZBB8 358 aa14.28□□□□□ -0.12
CTSA-213ENST00000606782 STAU1O95793 577 aaKnown RBP14.28□□□□□ -0.12
CTSA-213ENST00000606782 CST3P01034 146 aaPredicted RBP14.28□□□□□ -0.12
CTSA-213ENST00000606782 WARSP23381 471 aaKnown RBP14.28□□□□□ -0.12
CTSA-213ENST00000606782 ACAT1P24752 427 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms