RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 BDNFP23560 247 aa13.14□□□□□ -0.31
CTSA-210ENST00000606000 PRCPP42785 496 aa13.14□□□□□ -0.31
CTSA-210ENST00000606000 CACNA2D1P54289 1103 aa13.14□□□□□ -0.31
CTSA-210ENST00000606000 NLRP12P59046 1061 aa13.14□□□□□ -0.31
CTSA-210ENST00000606000 STARD6P59095 220 aa13.14□□□□□ -0.31
CTSA-210ENST00000606000 PPP3CAQ08209 521 aa13.14□□□□□ -0.31
CTSA-210ENST00000606000 ORC1Q13415 861 aa13.14□□□□□ -0.31
CTSA-210ENST00000606000 NCOA4Q13772 614 aa13.14□□□□□ -0.31
CTSA-210ENST00000606000 TAF12Q16514 161 aa13.14□□□□□ -0.31
CTSA-210ENST00000606000 ZNF699Q32M78 642 aa13.14□□□□□ -0.31
CTSA-210ENST00000606000 ZACNQ401N2 412 aa13.14□□□□□ -0.31
CTSA-210ENST00000606000 CFAP221Q4G0U5 840 aa13.14□□□□□ -0.31
CTSA-210ENST00000606000 ISM2Q6H9L7 571 aa13.14□□□□□ -0.31
CTSA-210ENST00000606000 SV2AQ7L0J3 742 aa13.14□□□□□ -0.31
CTSA-210ENST00000606000 ARID3BQ8IVW6 561 aaPredicted RBP13.14□□□□□ -0.31
CTSA-210ENST00000606000 CCDC105Q8IYK2 499 aa13.14□□□□□ -0.31
CTSA-210ENST00000606000 PJA1Q8NG27 643 aa13.14□□□□□ -0.31
CTSA-210ENST00000606000 SYAP1Q96A49 352 aaPredicted RBP13.14□□□□□ -0.31
CTSA-210ENST00000606000 ZFYVE19Q96K21 471 aa13.14□□□□□ -0.31
CTSA-210ENST00000606000 TRMT61BQ9BVS5 477 aaKnown RBP13.14□□□□□ -0.31
CTSA-210ENST00000606000 SNX25Q9H3E2 840 aa13.14□□□□□ -0.31
CTSA-210ENST00000606000 MMRN2Q9H8L6 949 aa13.14□□□□□ -0.31
CTSA-210ENST00000606000 BRD9Q9H8M2 597 aa13.14□□□□□ -0.31
CTSA-210ENST00000606000 TRPV4Q9HBA0 871 aa13.14□□□□□ -0.31
CTSA-210ENST00000606000 ABCB6Q9NP58 842 aa13.14□□□□□ -0.31
CTSA-210ENST00000606000 TMEM30AQ9NV96 361 aa13.14□□□□□ -0.31
CTSA-210ENST00000606000 DLGAP2Q9P1A6 1054 aa13.14□□□□□ -0.31
CTSA-210ENST00000606000 HMGXB4Q9UGU5 601 aa13.14□□□□□ -0.31
CTSA-210ENST00000606000 FRMD4BQ9Y2L6 1034 aa13.14□□□□□ -0.31
CTSA-210ENST00000606000 PCDHA5Q9Y5H7 936 aa13.14□□□□□ -0.31
CTSA-210ENST00000606000 WDFY4Q6ZS81 3184 aa13.14□□□□□ -0.31
CTSA-210ENST00000606000 TRIM49BA6NDI0 452 aa13.13□□□□□ -0.31
CTSA-210ENST00000606000 CLDN5O00501 218 aa13.13□□□□□ -0.31
CTSA-210ENST00000606000 TACC1O75410 805 aa13.13□□□□□ -0.31
CTSA-210ENST00000606000 NOL4O94818 638 aa13.13□□□□□ -0.31
CTSA-210ENST00000606000 KIF20AO95235 890 aa13.13□□□□□ -0.31
CTSA-210ENST00000606000 PSMC3P17980 439 aa13.13□□□□□ -0.31
CTSA-210ENST00000606000 TARSP26639 723 aaKnown RBP13.13□□□□□ -0.31
CTSA-210ENST00000606000 CDC25CP30307 473 aa13.13□□□□□ -0.31
CTSA-210ENST00000606000 ATICP31939 592 aa13.13□□□□□ -0.31
CTSA-210ENST00000606000 GNL1P36915 607 aaPredicted RBP13.13□□□□□ -0.31
CTSA-210ENST00000606000 GCLMP48507 274 aa13.13□□□□□ -0.31
CTSA-210ENST00000606000 VAMP7P51809 220 aa13.13□□□□□ -0.31
CTSA-210ENST00000606000 PMS1P54277 932 aaKnown RBP13.13□□□□□ -0.31
CTSA-210ENST00000606000 PFKPQ01813 784 aa13.13□□□□□ -0.31
CTSA-210ENST00000606000 UBXN2BQ14CS0 331 aa13.13□□□□□ -0.31
CTSA-210ENST00000606000 NFIL3Q16649 462 aa13.13□□□□□ -0.31
CTSA-210ENST00000606000 ARHGAP15Q53QZ3 475 aa13.13□□□□□ -0.31
CTSA-210ENST00000606000 ZNF667Q5HYK9 610 aa13.13□□□□□ -0.31
CTSA-210ENST00000606000 PHLDB3Q6NSJ2 640 aa13.13□□□□□ -0.31
CTSA-210ENST00000606000 ALYREFQ86V81 257 aaKnown RBP13.13□□□□□ -0.31
CTSA-210ENST00000606000 FAM186BQ8IYM0 893 aa13.13□□□□□ -0.31
CTSA-210ENST00000606000 MAB21L3Q8N8X9 362 aa13.13□□□□□ -0.31
CTSA-210ENST00000606000 DTWD2Q8NBA8 298 aa13.13□□□□□ -0.31
CTSA-210ENST00000606000 RIN3Q8TB24 985 aa13.13□□□□□ -0.31
CTSA-210ENST00000606000 TMC2Q8TDI7 906 aa13.13□□□□□ -0.31
CTSA-210ENST00000606000 DDX23Q9BUQ8 820 aaKnown RBP13.13□□□□□ -0.31
CTSA-210ENST00000606000 SLC46A2Q9BY10 475 aa13.13□□□□□ -0.31
CTSA-210ENST00000606000 GPR88Q9GZN0 384 aa13.13□□□□□ -0.31
CTSA-210ENST00000606000 LTB4R2Q9NPC1 389 aa13.13□□□□□ -0.31
CTSA-210ENST00000606000 MAGEC2Q9UBF1 373 aaPredicted RBP13.13□□□□□ -0.31
CTSA-210ENST00000606000 ANAPC1Q9H1A4 1944 aa13.13□□□□□ -0.31
CTSA-210ENST00000606000 HELZP42694 1942 aaKnown RBP13.12□□□□□ -0.31
CTSA-210ENST00000606000 KANSL1LA0AUZ9 987 aa13.12□□□□□ -0.31
CTSA-210ENST00000606000 A8MXQ7 604 aa13.12□□□□□ -0.31
CTSA-210ENST00000606000 ARNTLO00327 626 aa13.12□□□□□ -0.31
CTSA-210ENST00000606000 FGF19O95750 216 aa13.12□□□□□ -0.31
CTSA-210ENST00000606000 HLA-DRAP01903 254 aa13.12□□□□□ -0.31
CTSA-210ENST00000606000 CSH1P0DML2 217 aa13.12□□□□□ -0.31
CTSA-210ENST00000606000 CSH2P0DML3 217 aa13.12□□□□□ -0.31
CTSA-210ENST00000606000 PTPN1P18031 435 aaKnown RBP13.12□□□□□ -0.31
CTSA-210ENST00000606000 PIK3CAP42336 1068 aa13.12□□□□□ -0.31
CTSA-210ENST00000606000 SOX9P48436 509 aa13.12□□□□□ -0.31
CTSA-210ENST00000606000 AP3M2P53677 418 aa13.12□□□□□ -0.31
CTSA-210ENST00000606000 USP46P62068 366 aa13.12□□□□□ -0.31
CTSA-210ENST00000606000 RPL10AP62906 217 aaKnown RBP13.12□□□□□ -0.31
CTSA-210ENST00000606000 PRKCQQ04759 706 aa13.12□□□□□ -0.31
CTSA-210ENST00000606000 ADAM9Q13443 819 aa13.12□□□□□ -0.31
CTSA-210ENST00000606000 ZNF658Q5TYW1 1059 aaPredicted RBP13.12□□□□□ -0.31
CTSA-210ENST00000606000 TXNDC8Q6A555 127 aa13.12□□□□□ -0.31
CTSA-210ENST00000606000 C4orf50Q6ZRC1 276 aa13.12□□□□□ -0.31
CTSA-210ENST00000606000 MFSD6LQ8IWD5 586 aa13.12□□□□□ -0.31
CTSA-210ENST00000606000 TTC8Q8TAM2 541 aa13.12□□□□□ -0.31
CTSA-210ENST00000606000 MYCBPAPQ8TBZ2 947 aa13.12□□□□□ -0.31
CTSA-210ENST00000606000 DEPDC1BQ8WUY9 529 aa13.12□□□□□ -0.31
CTSA-210ENST00000606000 ATOH1Q92858 354 aaPredicted RBP13.12□□□□□ -0.31
CTSA-210ENST00000606000 DNASE1L2Q92874 299 aa13.12□□□□□ -0.31
CTSA-210ENST00000606000 SMARCE1Q969G3 411 aa13.12□□□□□ -0.31
CTSA-210ENST00000606000 FUBP3Q96I24 572 aaKnown RBP eCLIP13.12□□□□□ -0.31
CTSA-210ENST00000606000 GCNAQ96QF7 691 aa13.12□□□□□ -0.31
CTSA-210ENST00000606000 PRRX2Q99811 253 aa13.12□□□□□ -0.31
CTSA-210ENST00000606000 B3GNT5Q9BYG0 378 aa13.12□□□□□ -0.31
CTSA-210ENST00000606000 ZNF518BQ9C0D4 1074 aa13.12□□□□□ -0.31
CTSA-210ENST00000606000 TASP1Q9H6P5 420 aa13.12□□□□□ -0.31
CTSA-210ENST00000606000 VRTNQ9H8Y1 702 aa13.12□□□□□ -0.31
CTSA-210ENST00000606000 APOBEC3GQ9HC16 384 aaKnown RBP13.12□□□□□ -0.31
CTSA-210ENST00000606000 CCL26Q9Y258 94 aa13.12□□□□□ -0.31
CTSA-210ENST00000606000 SIT1Q9Y3P8 196 aa13.12□□□□□ -0.31
CTSA-210ENST00000606000 F8VP50 259 aa13.11□□□□□ -0.31
CTSA-210ENST00000606000 ZNF263O14978 683 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms