RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 MYL1P05976 194 aa17.52■□□□□ 0.4
TUBE1-206ENST00000603722 PDGFRBP09619 1106 aa17.52■□□□□ 0.4
TUBE1-206ENST00000603722 SOX9P48436 509 aa17.52■□□□□ 0.4
TUBE1-206ENST00000603722 KPNA1P52294 538 aaPredicted RBP17.52■□□□□ 0.4
TUBE1-206ENST00000603722 TNNC1P63316 161 aa17.52■□□□□ 0.4
TUBE1-206ENST00000603722 WDR72Q3MJ13 1102 aa17.52■□□□□ 0.4
TUBE1-206ENST00000603722 FAM171BQ6P995 826 aa17.52■□□□□ 0.4
TUBE1-206ENST00000603722 C4orf50Q6ZRC1 276 aa17.52■□□□□ 0.4
TUBE1-206ENST00000603722 CMTM8Q8IZV2 173 aa17.52■□□□□ 0.4
TUBE1-206ENST00000603722 FSIP1Q8NA03 581 aa17.52■□□□□ 0.4
TUBE1-206ENST00000603722 TTC8Q8TAM2 541 aa17.52■□□□□ 0.4
TUBE1-206ENST00000603722 BPIFB1Q8TDL5 484 aa17.52■□□□□ 0.4
TUBE1-206ENST00000603722 MRPS31Q92665 395 aaKnown RBP17.52■□□□□ 0.4
TUBE1-206ENST00000603722 KCTD10Q9H3F6 313 aa17.52■□□□□ 0.4
TUBE1-206ENST00000603722 GOLPH3LQ9H4A5 285 aa17.52■□□□□ 0.4
TUBE1-206ENST00000603722 GDPD2Q9HCC8 539 aa17.52■□□□□ 0.4
TUBE1-206ENST00000603722 CRTAC1Q9NQ79 661 aa17.52■□□□□ 0.4
TUBE1-206ENST00000603722 OBP2AQ9NY56 170 aa17.52■□□□□ 0.4
TUBE1-206ENST00000603722 CACNA1HO95180 2353 aa17.51■□□□□ 0.39
TUBE1-206ENST00000603722 LRRIQ3A6PVS8 624 aaPredicted RBP17.51■□□□□ 0.39
TUBE1-206ENST00000603722 PHACTR2O75167 634 aa17.51■□□□□ 0.39
TUBE1-206ENST00000603722 TADA3O75528 432 aa17.51■□□□□ 0.39
TUBE1-206ENST00000603722 CCNE1P24864 410 aa17.51■□□□□ 0.39
TUBE1-206ENST00000603722 WEE1P30291 646 aa17.51■□□□□ 0.39
TUBE1-206ENST00000603722 AVPR1AP37288 418 aa17.51■□□□□ 0.39
TUBE1-206ENST00000603722 RPS9P46781 194 aaKnown RBP17.51■□□□□ 0.39
TUBE1-206ENST00000603722 MYL6P60660 151 aa17.51■□□□□ 0.39
TUBE1-206ENST00000603722 CYP27A1Q02318 531 aa17.51■□□□□ 0.39
TUBE1-206ENST00000603722 FZD5Q13467 585 aa17.51■□□□□ 0.39
TUBE1-206ENST00000603722 BIRC3Q13489 604 aa17.51■□□□□ 0.39
TUBE1-206ENST00000603722 ARHGAP29Q52LW3 1261 aa17.51■□□□□ 0.39
TUBE1-206ENST00000603722 TXNDC8Q6A555 127 aa17.51■□□□□ 0.39
TUBE1-206ENST00000603722 ZNF687Q8N1G0 1237 aa17.51■□□□□ 0.39
TUBE1-206ENST00000603722 MAB21L3Q8N8X9 362 aa17.51■□□□□ 0.39
TUBE1-206ENST00000603722 SNX25Q9H3E2 840 aa17.51■□□□□ 0.39
TUBE1-206ENST00000603722 DMAC2Q9NW81 257 aa17.51■□□□□ 0.39
TUBE1-206ENST00000603722 MAGEC2Q9UBF1 373 aaPredicted RBP17.51■□□□□ 0.39
TUBE1-206ENST00000603722 UXTQ9UBK9 157 aaPredicted RBP17.51■□□□□ 0.39
TUBE1-206ENST00000603722 NXF1Q9UBU9 619 aaKnown RBP17.51■□□□□ 0.39
TUBE1-206ENST00000603722 NME7Q9Y5B8 376 aa17.51■□□□□ 0.39
TUBE1-206ENST00000603722 VPS13AQ96RL7 3174 aa17.5■□□□□ 0.39
TUBE1-206ENST00000603722 A0A1W2PQ27 194 aa17.5■□□□□ 0.39
TUBE1-206ENST00000603722 A0A1W2PQ64 194 aa17.5■□□□□ 0.39
TUBE1-206ENST00000603722 A0A1W2PQD8 194 aa17.5■□□□□ 0.39
TUBE1-206ENST00000603722 TACC1O75410 805 aa17.5■□□□□ 0.39
TUBE1-206ENST00000603722 NR3C1P04150 777 aa17.5■□□□□ 0.39
TUBE1-206ENST00000603722 BDNFP23560 247 aa17.5■□□□□ 0.39
TUBE1-206ENST00000603722 DDX6P26196 483 aaKnown RBP eCLIP17.5■□□□□ 0.39
TUBE1-206ENST00000603722 ATICP31939 592 aa17.5■□□□□ 0.39
TUBE1-206ENST00000603722 MAGEA11P43364 429 aa17.5■□□□□ 0.39
TUBE1-206ENST00000603722 MAPRE1Q15691 268 aaKnown RBP17.5■□□□□ 0.39
TUBE1-206ENST00000603722 MDH1BQ5I0G3 518 aa17.5■□□□□ 0.39
TUBE1-206ENST00000603722 TDRD10Q5VZ19 366 aaKnown RBP17.5■□□□□ 0.39
TUBE1-206ENST00000603722 ZC3H14Q6PJT7 736 aaKnown RBP17.5■□□□□ 0.39
TUBE1-206ENST00000603722 SLC9A9Q8IVB4 645 aa17.5■□□□□ 0.39
TUBE1-206ENST00000603722 CELF5Q8N6W0 485 aaKnown RBP17.5■□□□□ 0.39
TUBE1-206ENST00000603722 OR6B3Q8NGW1 331 aa17.5■□□□□ 0.39
TUBE1-206ENST00000603722 SYAP1Q96A49 352 aaPredicted RBP17.5■□□□□ 0.39
TUBE1-206ENST00000603722 TRMT2BQ96GJ1 504 aaKnown RBP17.5■□□□□ 0.39
TUBE1-206ENST00000603722 MSANTD3Q96H12 275 aa17.5■□□□□ 0.39
TUBE1-206ENST00000603722 PCED1BQ96HM7 432 aa17.5■□□□□ 0.39
TUBE1-206ENST00000603722 XYLT2Q9H1B5 865 aa17.5■□□□□ 0.39
TUBE1-206ENST00000603722 GTSE1Q9NYZ3 720 aa17.5■□□□□ 0.39
TUBE1-206ENST00000603722 ZMYM5Q9UJ78 669 aa17.5■□□□□ 0.39
TUBE1-206ENST00000603722 CCL26Q9Y258 94 aa17.5■□□□□ 0.39
TUBE1-206ENST00000603722 PDXKO00764 312 aa17.49■□□□□ 0.39
TUBE1-206ENST00000603722 STAU1O95793 577 aaKnown RBP17.49■□□□□ 0.39
TUBE1-206ENST00000603722 GNL1P36915 607 aaPredicted RBP17.49■□□□□ 0.39
TUBE1-206ENST00000603722 GRIK1P39086 918 aa17.49■□□□□ 0.39
TUBE1-206ENST00000603722 CSTF1Q05048 431 aaKnown RBP17.49■□□□□ 0.39
TUBE1-206ENST00000603722 TNK2Q07912 1038 aa17.49■□□□□ 0.39
TUBE1-206ENST00000603722 DPYDQ12882 1025 aa17.49■□□□□ 0.39
TUBE1-206ENST00000603722 MTAPQ13126 283 aa17.49■□□□□ 0.39
TUBE1-206ENST00000603722 ZNF699Q32M78 642 aa17.49■□□□□ 0.39
TUBE1-206ENST00000603722 CEP135Q66GS9 1140 aa17.49■□□□□ 0.39
TUBE1-206ENST00000603722 KRBA2Q6ZNG9 492 aa17.49■□□□□ 0.39
TUBE1-206ENST00000603722 MON1AQ86VX9 555 aa17.49■□□□□ 0.39
TUBE1-206ENST00000603722 MYCBPAPQ8TBZ2 947 aa17.49■□□□□ 0.39
TUBE1-206ENST00000603722 PARD3BQ8TEW8 1205 aa17.49■□□□□ 0.39
TUBE1-206ENST00000603722 USP13Q92995 863 aaPredicted RBP17.49■□□□□ 0.39
TUBE1-206ENST00000603722 CCDC47Q96A33 483 aaKnown RBP17.49■□□□□ 0.39
TUBE1-206ENST00000603722 MYRFLQ96LU7 910 aa17.49■□□□□ 0.39
TUBE1-206ENST00000603722 DPEP3Q9H4B8 488 aa17.49■□□□□ 0.39
TUBE1-206ENST00000603722 C8orf33Q9H7E9 229 aaPredicted RBP17.49■□□□□ 0.39
TUBE1-206ENST00000603722 LMAN1LQ9HAT1 526 aa17.49■□□□□ 0.39
TUBE1-206ENST00000603722 TRPC7Q9HCX4 862 aa17.49■□□□□ 0.39
TUBE1-206ENST00000603722 THG1LQ9NWX6 298 aaKnown RBP17.49■□□□□ 0.39
TUBE1-206ENST00000603722 FBXO4Q9UKT5 387 aa17.49■□□□□ 0.39
TUBE1-206ENST00000603722 COL4A2P08572 1712 aa17.48■□□□□ 0.39
TUBE1-206ENST00000603722 A8MXQ7 604 aa17.48■□□□□ 0.39
TUBE1-206ENST00000603722 SPECC1L-ADORA2AF8WAN1 911 aa17.48■□□□□ 0.39
TUBE1-206ENST00000603722 CALUO43852 315 aaPredicted RBP17.48■□□□□ 0.39
TUBE1-206ENST00000603722 RHOBTB3O94955 611 aa17.48■□□□□ 0.39
TUBE1-206ENST00000603722 CTHP32929 405 aa17.48■□□□□ 0.39
TUBE1-206ENST00000603722 AP3M2P53677 418 aa17.48■□□□□ 0.39
TUBE1-206ENST00000603722 MLLT6P55198 1093 aaPredicted RBP17.48■□□□□ 0.39
TUBE1-206ENST00000603722 DLG4P78352 724 aa17.48■□□□□ 0.39
TUBE1-206ENST00000603722 CLDN10P78369 228 aa17.48■□□□□ 0.39
TUBE1-206ENST00000603722 PLCB2Q00722 1185 aa17.48■□□□□ 0.39
TUBE1-206ENST00000603722 NCOA4Q13772 614 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms