RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 TAF4BQ92750 862 aa23.37■■□□□ 1.33
PPFIA3-208ENST00000602726 SMYD3Q9H7B4 428 aa23.37■■□□□ 1.33
PPFIA3-208ENST00000602726 TBC1D17Q9HA65 648 aa23.37■■□□□ 1.33
PPFIA3-208ENST00000602726 IL21Q9HBE4 155 aa23.37■■□□□ 1.33
PPFIA3-208ENST00000602726 MAGED2Q9UNF1 606 aaPredicted RBP23.37■■□□□ 1.33
PPFIA3-208ENST00000602726 TRIM49P0CI25 452 aa23.36■■□□□ 1.33
PPFIA3-208ENST00000602726 TRIM49CP0CI26 452 aa23.36■■□□□ 1.33
PPFIA3-208ENST00000602726 HMGA1P17096 107 aaKnown RBP23.36■■□□□ 1.33
PPFIA3-208ENST00000602726 PTPN1P18031 435 aaKnown RBP23.36■■□□□ 1.33
PPFIA3-208ENST00000602726 AOC1P19801 751 aa23.36■■□□□ 1.33
PPFIA3-208ENST00000602726 PIK3CAP42336 1068 aa23.36■■□□□ 1.33
PPFIA3-208ENST00000602726 GCLMP48507 274 aa23.36■■□□□ 1.33
PPFIA3-208ENST00000602726 STIM1Q13586 685 aa23.36■■□□□ 1.33
PPFIA3-208ENST00000602726 MDH1BQ5I0G3 518 aa23.36■■□□□ 1.33
PPFIA3-208ENST00000602726 ISM2Q6H9L7 571 aa23.36■■□□□ 1.33
PPFIA3-208ENST00000602726 SCARA5Q6ZMJ2 495 aa23.36■■□□□ 1.33
PPFIA3-208ENST00000602726 E2F7Q96AV8 911 aa23.36■■□□□ 1.33
PPFIA3-208ENST00000602726 ELMO3Q96BJ8 720 aa23.36■■□□□ 1.33
PPFIA3-208ENST00000602726 EEF2KMTQ96G04 330 aa23.36■■□□□ 1.33
PPFIA3-208ENST00000602726 SHDQ96IW2 340 aa23.36■■□□□ 1.33
PPFIA3-208ENST00000602726 MKNK1Q9BUB5 465 aa23.36■■□□□ 1.33
PPFIA3-208ENST00000602726 TRMT61BQ9BVS5 477 aaKnown RBP23.36■■□□□ 1.33
PPFIA3-208ENST00000602726 NME7Q9Y5B8 376 aa23.36■■□□□ 1.33
PPFIA3-208ENST00000602726 SLC38A8A6NNN8 435 aa23.35■■□□□ 1.33
PPFIA3-208ENST00000602726 HLA-DRAP01903 254 aa23.35■■□□□ 1.33
PPFIA3-208ENST00000602726 EPB41P11171 864 aaKnown RBP23.35■■□□□ 1.33
PPFIA3-208ENST00000602726 PSMC3P17980 439 aa23.35■■□□□ 1.33
PPFIA3-208ENST00000602726 BDNFP23560 247 aa23.35■■□□□ 1.33
PPFIA3-208ENST00000602726 PLA2G5P39877 138 aa23.35■■□□□ 1.33
PPFIA3-208ENST00000602726 NUBP1P53384 320 aa23.35■■□□□ 1.33
PPFIA3-208ENST00000602726 CDH8P55286 799 aa23.35■■□□□ 1.33
PPFIA3-208ENST00000602726 CYP4F8P98187 520 aa23.35■■□□□ 1.33
PPFIA3-208ENST00000602726 SLC44A4Q53GD3 710 aa23.35■■□□□ 1.33
PPFIA3-208ENST00000602726 VSTM1Q6UX27 236 aa23.35■■□□□ 1.33
PPFIA3-208ENST00000602726 VITQ6UXI7 678 aa23.35■■□□□ 1.33
PPFIA3-208ENST00000602726 ARID3BQ8IVW6 561 aaPredicted RBP23.35■■□□□ 1.33
PPFIA3-208ENST00000602726 ADSSL1Q8N142 457 aa23.35■■□□□ 1.33
PPFIA3-208ENST00000602726 STKLD1Q8NE28 680 aa23.35■■□□□ 1.33
PPFIA3-208ENST00000602726 DEPDC1BQ8WUY9 529 aa23.35■■□□□ 1.33
PPFIA3-208ENST00000602726 PCED1BQ96HM7 432 aa23.35■■□□□ 1.33
PPFIA3-208ENST00000602726 TASP1Q9H6P5 420 aa23.35■■□□□ 1.33
PPFIA3-208ENST00000602726 MMRN2Q9H8L6 949 aa23.35■■□□□ 1.33
PPFIA3-208ENST00000602726 BRD9Q9H8M2 597 aa23.35■■□□□ 1.33
PPFIA3-208ENST00000602726 HEPACAM2A8MVW5 462 aa23.34■■□□□ 1.33
PPFIA3-208ENST00000602726 PI15O43692 258 aa23.34■■□□□ 1.33
PPFIA3-208ENST00000602726 ASS1P00966 412 aaKnown RBP23.34■■□□□ 1.33
PPFIA3-208ENST00000602726 GRIK1P39086 918 aa23.34■■□□□ 1.33
PPFIA3-208ENST00000602726 RAP1GAPP47736 663 aa23.34■■□□□ 1.33
PPFIA3-208ENST00000602726 NLRP12P59046 1061 aa23.34■■□□□ 1.33
PPFIA3-208ENST00000602726 FKBP3Q00688 224 aaKnown RBP23.34■■□□□ 1.33
PPFIA3-208ENST00000602726 PPP3CAQ08209 521 aa23.34■■□□□ 1.33
PPFIA3-208ENST00000602726 MLF2Q15773 248 aaPredicted RBP23.34■■□□□ 1.33
PPFIA3-208ENST00000602726 ANKRD40Q6AI12 368 aa23.34■■□□□ 1.33
PPFIA3-208ENST00000602726 PHLDB3Q6NSJ2 640 aa23.34■■□□□ 1.33
PPFIA3-208ENST00000602726 GPIHBP1Q8IV16 184 aa23.34■■□□□ 1.33
PPFIA3-208ENST00000602726 MFSD6LQ8IWD5 586 aa23.34■■□□□ 1.33
PPFIA3-208ENST00000602726 PRSS33Q8NF86 280 aa23.34■■□□□ 1.33
PPFIA3-208ENST00000602726 IMPG2Q9BZV3 1241 aa23.34■■□□□ 1.33
PPFIA3-208ENST00000602726 DPEP3Q9H4B8 488 aa23.34■■□□□ 1.33
PPFIA3-208ENST00000602726 UXTQ9UBK9 157 aaPredicted RBP23.34■■□□□ 1.33
PPFIA3-208ENST00000602726 MAN1B1Q9UKM7 699 aa23.34■■□□□ 1.33
PPFIA3-208ENST00000602726 DPYSL4O14531 572 aa23.33■■□□□ 1.33
PPFIA3-208ENST00000602726 PSMA7O14818 248 aa23.33■■□□□ 1.33
PPFIA3-208ENST00000602726 NOL4O94818 638 aa23.33■■□□□ 1.33
PPFIA3-208ENST00000602726 F11P03951 625 aa23.33■■□□□ 1.33
PPFIA3-208ENST00000602726 ANXA13P27216 316 aa23.33■■□□□ 1.33
PPFIA3-208ENST00000602726 GDI1P31150 447 aa23.33■■□□□ 1.33
PPFIA3-208ENST00000602726 GTF2H1P32780 548 aa23.33■■□□□ 1.33
PPFIA3-208ENST00000602726 PTPN5P54829 565 aa23.33■■□□□ 1.33
PPFIA3-208ENST00000602726 UBE2HP62256 183 aa23.33■■□□□ 1.33
PPFIA3-208ENST00000602726 PRKCQQ04759 706 aa23.33■■□□□ 1.33
PPFIA3-208ENST00000602726 LRRC63Q05C16 580 aa23.33■■□□□ 1.33
PPFIA3-208ENST00000602726 YAF2Q8IY57 180 aa23.33■■□□□ 1.33
PPFIA3-208ENST00000602726 B3GALNT2Q8NCR0 500 aa23.33■■□□□ 1.33
PPFIA3-208ENST00000602726 IRF7Q92985 503 aa23.33■■□□□ 1.33
PPFIA3-208ENST00000602726 TRMT2BQ96GJ1 504 aaKnown RBP23.33■■□□□ 1.33
PPFIA3-208ENST00000602726 TMEM8AQ9HCN3 771 aa23.33■■□□□ 1.33
PPFIA3-208ENST00000602726 ZMYM5Q9UJ78 669 aa23.33■■□□□ 1.33
PPFIA3-208ENST00000602726 ZNF263O14978 683 aa23.32■■□□□ 1.32
PPFIA3-208ENST00000602726 STX10O60499 249 aa23.32■■□□□ 1.32
PPFIA3-208ENST00000602726 PPP1R2P41236 205 aa23.32■■□□□ 1.32
PPFIA3-208ENST00000602726 PMS1P54277 932 aaKnown RBP23.32■■□□□ 1.32
PPFIA3-208ENST00000602726 STARD6P59095 220 aa23.32■■□□□ 1.32
PPFIA3-208ENST00000602726 SPOPLQ6IQ16 392 aa23.32■■□□□ 1.32
PPFIA3-208ENST00000602726 TMEM150AQ86TG1 271 aa23.32■■□□□ 1.32
PPFIA3-208ENST00000602726 CCDC150Q8NCX0 1101 aa23.32■■□□□ 1.32
PPFIA3-208ENST00000602726 TAS1R2Q8TE23 839 aa23.32■■□□□ 1.32
PPFIA3-208ENST00000602726 MRPS31Q92665 395 aaKnown RBP23.32■■□□□ 1.32
PPFIA3-208ENST00000602726 DNASE1L2Q92874 299 aa23.32■■□□□ 1.32
PPFIA3-208ENST00000602726 DHTKD1Q96HY7 919 aaPredicted RBP23.32■■□□□ 1.32
PPFIA3-208ENST00000602726 TNIP3Q96KP6 325 aa23.32■■□□□ 1.32
PPFIA3-208ENST00000602726 SPATA17Q96L03 361 aa23.32■■□□□ 1.32
PPFIA3-208ENST00000602726 MYRFLQ96LU7 910 aa23.32■■□□□ 1.32
PPFIA3-208ENST00000602726 SLC46A2Q9BY10 475 aa23.32■■□□□ 1.32
PPFIA3-208ENST00000602726 SDCBP2Q9H190 292 aa23.32■■□□□ 1.32
PPFIA3-208ENST00000602726 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.32■■□□□ 1.32
PPFIA3-208ENST00000602726 CACNA1HO95180 2353 aa23.32■■□□□ 1.32
PPFIA3-208ENST00000602726 TRIM66O15016 1216 aa23.31■■□□□ 1.32
PPFIA3-208ENST00000602726 SLC16A3O15427 465 aaKnown RBP23.31■■□□□ 1.32
PPFIA3-208ENST00000602726 GALR2O43603 387 aaPredicted RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms