RNA–Protein interactions for RNA: ENST00000602516.1

HCG18-244, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 2,890 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-244ENST00000602516 SNTNA6NMZ2 147 aa8□□□□□ -1.13
HCG18-244ENST00000602516 USP17L15C9J2P7 530 aa8□□□□□ -1.13
HCG18-244ENST00000602516 USP17L13C9JLJ4 530 aa8□□□□□ -1.13
HCG18-244ENST00000602516 USP17L11C9JVI0 530 aa8□□□□□ -1.13
HCG18-244ENST00000602516 USP17L18D6R9N7 530 aa8□□□□□ -1.13
HCG18-244ENST00000602516 USP17L22D6RA61 530 aa8□□□□□ -1.13
HCG18-244ENST00000602516 USP17L17D6RBQ6 530 aa8□□□□□ -1.13
HCG18-244ENST00000602516 USP17L19D6RCP7 530 aa8□□□□□ -1.13
HCG18-244ENST00000602516 USP17L20D6RJB6 530 aa8□□□□□ -1.13
HCG18-244ENST00000602516 FKBP9O95302 570 aa8□□□□□ -1.13
HCG18-244ENST00000602516 GNA14O95837 355 aa8□□□□□ -1.13
HCG18-244ENST00000602516 GSTT1P30711 240 aa8□□□□□ -1.13
HCG18-244ENST00000602516 KRT20P35900 424 aa8□□□□□ -1.13
HCG18-244ENST00000602516 ZNF76P36508 570 aa8□□□□□ -1.13
HCG18-244ENST00000602516 CLCN4P51793 760 aa8□□□□□ -1.13
HCG18-244ENST00000602516 JAG1P78504 1218 aa8□□□□□ -1.13
HCG18-244ENST00000602516 USP17L24Q0WX57 530 aa8□□□□□ -1.13
HCG18-244ENST00000602516 SHEQ5VZ18 495 aa8□□□□□ -1.13
HCG18-244ENST00000602516 ANO7Q6IWH7 933 aa8□□□□□ -1.13
HCG18-244ENST00000602516 METTL2BQ6P1Q9 378 aaKnown RBP8□□□□□ -1.13
HCG18-244ENST00000602516 USP17L6PQ6QN14 398 aa8□□□□□ -1.13
HCG18-244ENST00000602516 ABRAXAS1Q6UWZ7 409 aa8□□□□□ -1.13
HCG18-244ENST00000602516 RSRC2Q7L4I2 434 aaKnown RBP8□□□□□ -1.13
HCG18-244ENST00000602516 GTF3C2Q8WUA4 911 aaPredicted RBP8□□□□□ -1.13
HCG18-244ENST00000602516 ALKBH8Q96BT7 664 aaKnown RBP8□□□□□ -1.13
HCG18-244ENST00000602516 ANKRD36BP1Q96IX9 119 aa8□□□□□ -1.13
HCG18-244ENST00000602516 PRMT6Q96LA8 375 aaPredicted RBP8□□□□□ -1.13
HCG18-244ENST00000602516 P2RX7Q99572 595 aaKnown RBP8□□□□□ -1.13
HCG18-244ENST00000602516 TTC1Q99614 292 aa8□□□□□ -1.13
HCG18-244ENST00000602516 ANO3Q9BYT9 981 aa8□□□□□ -1.13
HCG18-244ENST00000602516 FHDC1Q9C0D6 1143 aaPredicted RBP8□□□□□ -1.13
HCG18-244ENST00000602516 NT5C3AQ9H0P0 336 aa8□□□□□ -1.13
HCG18-244ENST00000602516 GBP3Q9H0R5 595 aa8□□□□□ -1.13
HCG18-244ENST00000602516 TDRD3Q9H7E2 651 aaKnown RBP8□□□□□ -1.13
HCG18-244ENST00000602516 NOP53Q9NZM5 478 aaKnown RBP8□□□□□ -1.13
HCG18-244ENST00000602516 PLOD2O00469 737 aa8□□□□□ -1.13
HCG18-244ENST00000602516 TRDMT1O14717 391 aaKnown RBP8□□□□□ -1.13
HCG18-244ENST00000602516 TLR2O60603 784 aa8□□□□□ -1.13
HCG18-244ENST00000602516 NDUFA10O95299 355 aa8□□□□□ -1.13
HCG18-244ENST00000602516 NDUFB10O96000 172 aa8□□□□□ -1.13
HCG18-244ENST00000602516 COL6A2P12110 1019 aa8□□□□□ -1.13
HCG18-244ENST00000602516 PTGS2P35354 604 aa8□□□□□ -1.13
HCG18-244ENST00000602516 LRRC63Q05C16 580 aa8□□□□□ -1.13
HCG18-244ENST00000602516 TUBB2AQ13885 445 aa8□□□□□ -1.13
HCG18-244ENST00000602516 EPHA7Q15375 998 aa8□□□□□ -1.13
HCG18-244ENST00000602516 KLHL38Q2WGJ6 581 aa8□□□□□ -1.13
HCG18-244ENST00000602516 RNF220Q5VTB9 566 aa8□□□□□ -1.13
HCG18-244ENST00000602516 FOXB2Q5VYV0 432 aa8□□□□□ -1.13
HCG18-244ENST00000602516 PDE12Q6L8Q7 609 aaKnown RBP8□□□□□ -1.13
HCG18-244ENST00000602516 IKBIPQ70UQ0 350 aa8□□□□□ -1.13
HCG18-244ENST00000602516 SPATA24Q86W54 205 aa8□□□□□ -1.13
HCG18-244ENST00000602516 DTX3Q8N9I9 347 aa8□□□□□ -1.13
HCG18-244ENST00000602516 CEP70Q8NHQ1 597 aa8□□□□□ -1.13
HCG18-244ENST00000602516 IQCDQ96DY2 449 aa8□□□□□ -1.13
HCG18-244ENST00000602516 TRMT2BQ96GJ1 504 aaKnown RBP8□□□□□ -1.13
HCG18-244ENST00000602516 NLRP4Q96MN2 994 aa8□□□□□ -1.13
HCG18-244ENST00000602516 TUBB2BQ9BVA1 445 aa8□□□□□ -1.13
HCG18-244ENST00000602516 AMNQ9BXJ7 453 aa8□□□□□ -1.13
HCG18-244ENST00000602516 TUT1Q9H6E5 874 aaKnown RBP8□□□□□ -1.13
HCG18-244ENST00000602516 VRTNQ9H8Y1 702 aa8□□□□□ -1.13
HCG18-244ENST00000602516 ASNSD1Q9NWL6 643 aa8□□□□□ -1.13
HCG18-244ENST00000602516 PDP2Q9P2J9 529 aa8□□□□□ -1.13
HCG18-244ENST00000602516 EPS15L1Q9UBC2 864 aa8□□□□□ -1.13
HCG18-244ENST00000602516 REXO2Q9Y3B8 237 aaKnown RBP8□□□□□ -1.13
HCG18-244ENST00000602516 RWDD3Q9Y3V2 267 aa8□□□□□ -1.13
HCG18-244ENST00000602516 ATAD5Q96QE3 1844 aa8□□□□□ -1.13
HCG18-244ENST00000602516 SYNDIG1LA6NDD5 238 aa8□□□□□ -1.13
HCG18-244ENST00000602516 INO80B-WBP1J3KQ70 363 aa8□□□□□ -1.13
HCG18-244ENST00000602516 NKRFO15226 690 aaKnown RBP eCLIP8□□□□□ -1.13
HCG18-244ENST00000602516 EPB41P11171 864 aaKnown RBP8□□□□□ -1.13
HCG18-244ENST00000602516 SELLP14151 372 aa8□□□□□ -1.13
HCG18-244ENST00000602516 GBP1P32455 592 aa8□□□□□ -1.13
HCG18-244ENST00000602516 CCNG1P51959 295 aa8□□□□□ -1.13
HCG18-244ENST00000602516 SPIRE1Q08AE8 756 aa8□□□□□ -1.13
HCG18-244ENST00000602516 XRCC4Q13426 336 aa8□□□□□ -1.13
HCG18-244ENST00000602516 SPIDRQ14159 915 aa8□□□□□ -1.13
HCG18-244ENST00000602516 RRP1BQ14684 758 aaKnown RBP8□□□□□ -1.13
HCG18-244ENST00000602516 CYP4A22Q5TCH4 519 aa8□□□□□ -1.13
HCG18-244ENST00000602516 DYMQ7RTS9 669 aa8□□□□□ -1.13
HCG18-244ENST00000602516 FAM186BQ8IYM0 893 aa8□□□□□ -1.13
HCG18-244ENST00000602516 SLFN12Q8IYM2 578 aa8□□□□□ -1.13
HCG18-244ENST00000602516 ETNPPLQ8TBG4 499 aa8□□□□□ -1.13
HCG18-244ENST00000602516 ITPKCQ96DU7 683 aa8□□□□□ -1.13
HCG18-244ENST00000602516 METTL2AQ96IZ6 378 aaKnown RBP8□□□□□ -1.13
HCG18-244ENST00000602516 HEPHQ9BQS7 1158 aa8□□□□□ -1.13
HCG18-244ENST00000602516 NOC4LQ9BVI4 516 aaKnown RBP8□□□□□ -1.13
HCG18-244ENST00000602516 NUF2Q9BZD4 464 aa8□□□□□ -1.13
HCG18-244ENST00000602516 MIS12Q9H081 205 aa8□□□□□ -1.13
HCG18-244ENST00000602516 VPS11Q9H270 941 aa8□□□□□ -1.13
HCG18-244ENST00000602516 EPC1Q9H2F5 836 aa8□□□□□ -1.13
HCG18-244ENST00000602516 ATP13A1Q9HD20 1204 aa8□□□□□ -1.13
HCG18-244ENST00000602516 ABI2Q9NYB9 513 aaPredicted RBP8□□□□□ -1.13
HCG18-244ENST00000602516 ANAPC5Q9UJX4 755 aa8□□□□□ -1.13
HCG18-244ENST00000602516 GGA2Q9UJY4 613 aa8□□□□□ -1.13
HCG18-244ENST00000602516 SAMM50Q9Y512 469 aa8□□□□□ -1.13
HCG18-244ENST00000602516 PI4K2BG5E9Z4 385 aa7.99□□□□□ -1.13
HCG18-244ENST00000602516 GDF11O95390 407 aa7.99□□□□□ -1.13
HCG18-244ENST00000602516 TFPTP0C1Z6 253 aa7.99□□□□□ -1.13
HCG18-244ENST00000602516 TMEM11P17152 192 aa7.99□□□□□ -1.13
HCG18-244ENST00000602516 SP100P23497 879 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms