RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 TRMT2BQ96GJ1 504 aaKnown RBP24.26■■□□□ 1.47
SSBP4-209ENST00000601357 MYRFLQ96LU7 910 aa24.26■■□□□ 1.47
SSBP4-209ENST00000601357 SPATA6Q9NWH7 488 aaPredicted RBP24.26■■□□□ 1.47
SSBP4-209ENST00000601357 CDH9Q9ULB4 789 aa24.26■■□□□ 1.47
SSBP4-209ENST00000601357 GREB1Q4ZG55 1949 aa24.25■■□□□ 1.47
SSBP4-209ENST00000601357 EXOC3O60645 756 aa24.25■■□□□ 1.47
SSBP4-209ENST00000601357 STAU1O95793 577 aaKnown RBP24.25■■□□□ 1.47
SSBP4-209ENST00000601357 MAGEA11P43364 429 aa24.25■■□□□ 1.47
SSBP4-209ENST00000601357 ZNF528Q3MIS6 628 aa24.25■■□□□ 1.47
SSBP4-209ENST00000601357 SDHAF4Q5VUM1 108 aa24.25■■□□□ 1.47
SSBP4-209ENST00000601357 SPATA2LQ8IUW3 424 aaPredicted RBP24.25■■□□□ 1.47
SSBP4-209ENST00000601357 SLC9A9Q8IVB4 645 aa24.25■■□□□ 1.47
SSBP4-209ENST00000601357 CMTM8Q8IZV2 173 aa24.25■■□□□ 1.47
SSBP4-209ENST00000601357 FAM3CQ92520 227 aa24.25■■□□□ 1.47
SSBP4-209ENST00000601357 SYT15Q9BQS2 421 aa24.25■■□□□ 1.47
SSBP4-209ENST00000601357 SCAND2PQ9GZW5 306 aaPredicted RBP24.25■■□□□ 1.47
SSBP4-209ENST00000601357 XYLT2Q9H1B5 865 aa24.25■■□□□ 1.47
SSBP4-209ENST00000601357 CRTAC1Q9NQ79 661 aa24.25■■□□□ 1.47
SSBP4-209ENST00000601357 FBXO4Q9UKT5 387 aa24.25■■□□□ 1.47
SSBP4-209ENST00000601357 ATP6V1DQ9Y5K8 247 aa24.25■■□□□ 1.47
SSBP4-209ENST00000601357 SOBPA7XYQ1 873 aa24.24■■□□□ 1.47
SSBP4-209ENST00000601357 DPYSL4O14531 572 aa24.24■■□□□ 1.47
SSBP4-209ENST00000601357 TACC1O75410 805 aa24.24■■□□□ 1.47
SSBP4-209ENST00000601357 FAM163BP0C2L3 166 aa24.24■■□□□ 1.47
SSBP4-209ENST00000601357 DDX6P26196 483 aaKnown RBP eCLIP24.24■■□□□ 1.471e-6■■■■□ 24.4
SSBP4-209ENST00000601357 SYKP43405 635 aa24.24■■□□□ 1.47
SSBP4-209ENST00000601357 PSMC1P62191 440 aaKnown RBP24.24■■□□□ 1.47
SSBP4-209ENST00000601357 ARHGAP29Q52LW3 1261 aa24.24■■□□□ 1.47
SSBP4-209ENST00000601357 BPIFB1Q8TDL5 484 aa24.24■■□□□ 1.47
SSBP4-209ENST00000601357 MSANTD3Q96H12 275 aa24.24■■□□□ 1.47
SSBP4-209ENST00000601357 MMS19Q96T76 1030 aa24.24■■□□□ 1.47
SSBP4-209ENST00000601357 SEMA4AQ9H3S1 761 aa24.24■■□□□ 1.47
SSBP4-209ENST00000601357 NME7Q9Y5B8 376 aa24.24■■□□□ 1.47
SSBP4-209ENST00000601357 F5P12259 2224 aa24.23■■□□□ 1.47
SSBP4-209ENST00000601357 FRYLO94915 3013 aa24.23■■□□□ 1.47
SSBP4-209ENST00000601357 A0A1W2PQ27 194 aa24.23■■□□□ 1.47
SSBP4-209ENST00000601357 A0A1W2PQ64 194 aa24.23■■□□□ 1.47
SSBP4-209ENST00000601357 A0A1W2PQD8 194 aa24.23■■□□□ 1.47
SSBP4-209ENST00000601357 SLC38A8A6NNN8 435 aa24.23■■□□□ 1.47
SSBP4-209ENST00000601357 TADA3O75528 432 aa24.23■■□□□ 1.47
SSBP4-209ENST00000601357 RPN1P04843 607 aaKnown RBP24.23■■□□□ 1.47
SSBP4-209ENST00000601357 CASP4P49662 377 aa24.23■■□□□ 1.47
SSBP4-209ENST00000601357 C4orf50Q6ZRC1 276 aa24.23■■□□□ 1.47
SSBP4-209ENST00000601357 CELF5Q8N6W0 485 aaKnown RBP24.23■■□□□ 1.47
SSBP4-209ENST00000601357 CSGALNACT1Q8TDX6 532 aa24.23■■□□□ 1.47
SSBP4-209ENST00000601357 PARD3BQ8TEW8 1205 aa24.23■■□□□ 1.47
SSBP4-209ENST00000601357 ZFYVE19Q96K21 471 aa24.23■■□□□ 1.47
SSBP4-209ENST00000601357 MRPL45Q9BRJ2 306 aaKnown RBP24.23■■□□□ 1.47
SSBP4-209ENST00000601357 SMG9Q9H0W8 520 aaKnown RBP24.23■■□□□ 1.47
SSBP4-209ENST00000601357 UXTQ9UBK9 157 aaPredicted RBP24.23■■□□□ 1.47
SSBP4-209ENST00000601357 NDRG2Q9UN36 371 aaKnown RBP24.23■■□□□ 1.47
SSBP4-209ENST00000601357 MAGED2Q9UNF1 606 aaPredicted RBP24.23■■□□□ 1.47
SSBP4-209ENST00000601357 R4GN57 208 aa24.23■■□□□ 1.47
SSBP4-209ENST00000601357 PDXKO00764 312 aa24.22■■□□□ 1.47
SSBP4-209ENST00000601357 LAMTOR5O43504 91 aa24.22■■□□□ 1.47
SSBP4-209ENST00000601357 ATICP31939 592 aa24.22■■□□□ 1.47
SSBP4-209ENST00000601357 MYL6P60660 151 aa24.22■■□□□ 1.47
SSBP4-209ENST00000601357 MAPRE1Q15691 268 aaKnown RBP24.22■■□□□ 1.47
SSBP4-209ENST00000601357 WDR72Q3MJ13 1102 aa24.22■■□□□ 1.47
SSBP4-209ENST00000601357 C1orf228Q6PIY5 440 aa24.22■■□□□ 1.47
SSBP4-209ENST00000601357 MON1AQ86VX9 555 aa24.22■■□□□ 1.47
SSBP4-209ENST00000601357 MAB21L3Q8N8X9 362 aa24.22■■□□□ 1.47
SSBP4-209ENST00000601357 MYLPFQ96A32 169 aa24.22■■□□□ 1.47
SSBP4-209ENST00000601357 CHRDQ9H2X0 955 aa24.22■■□□□ 1.47
SSBP4-209ENST00000601357 GOLPH3LQ9H4A5 285 aa24.22■■□□□ 1.47
SSBP4-209ENST00000601357 C8orf33Q9H7E9 229 aaPredicted RBP24.22■■□□□ 1.47
SSBP4-209ENST00000601357 VRTNQ9H8Y1 702 aa24.22■■□□□ 1.47
SSBP4-209ENST00000601357 LRRIQ3A6PVS8 624 aaPredicted RBP24.21■■□□□ 1.47
SSBP4-209ENST00000601357 RHOBTB3O94955 611 aa24.21■■□□□ 1.47
SSBP4-209ENST00000601357 PDGFRBP09619 1106 aa24.21■■□□□ 1.47
SSBP4-209ENST00000601357 PRR29P0C7W0 189 aa24.21■■□□□ 1.47
SSBP4-209ENST00000601357 CCNE1P24864 410 aa24.21■■□□□ 1.47
SSBP4-209ENST00000601357 PLCB2Q00722 1185 aa24.21■■□□□ 1.47
SSBP4-209ENST00000601357 DPYDQ12882 1025 aa24.21■■□□□ 1.47
SSBP4-209ENST00000601357 MTAPQ13126 283 aa24.21■■□□□ 1.47
SSBP4-209ENST00000601357 TDRD10Q5VZ19 366 aaKnown RBP24.21■■□□□ 1.47
SSBP4-209ENST00000601357 TXNDC8Q6A555 127 aa24.21■■□□□ 1.47
SSBP4-209ENST00000601357 ZC3H14Q6PJT7 736 aaKnown RBP24.21■■□□□ 1.47
SSBP4-209ENST00000601357 VSTM1Q6UX27 236 aa24.21■■□□□ 1.47
SSBP4-209ENST00000601357 MAMSTRQ6ZN01 415 aa24.21■■□□□ 1.47
SSBP4-209ENST00000601357 MYCBPAPQ8TBZ2 947 aa24.21■■□□□ 1.47
SSBP4-209ENST00000601357 MRPS31Q92665 395 aaKnown RBP24.21■■□□□ 1.47
SSBP4-209ENST00000601357 USP13Q92995 863 aaPredicted RBP24.21■■□□□ 1.47
SSBP4-209ENST00000601357 PCED1BQ96HM7 432 aa24.21■■□□□ 1.47
SSBP4-209ENST00000601357 SPATA17Q96L03 361 aa24.21■■□□□ 1.47
SSBP4-209ENST00000601357 CEP295NLQ96MC4 621 aa24.21■■□□□ 1.47
SSBP4-209ENST00000601357 PRMT8Q9NR22 394 aaPredicted RBP24.21■■□□□ 1.47
SSBP4-209ENST00000601357 GTSE1Q9NYZ3 720 aa24.21■■□□□ 1.47
SSBP4-209ENST00000601357 MAGEC2Q9UBF1 373 aaPredicted RBP24.21■■□□□ 1.47
SSBP4-209ENST00000601357 CCL26Q9Y258 94 aa24.21■■□□□ 1.47
SSBP4-209ENST00000601357 ANAPC1Q9H1A4 1944 aa24.21■■□□□ 1.47
SSBP4-209ENST00000601357 NR3C1P04150 777 aa24.2■■□□□ 1.46
SSBP4-209ENST00000601357 CHRNB1P11230 501 aa24.2■■□□□ 1.46
SSBP4-209ENST00000601357 GNL1P36915 607 aaPredicted RBP24.2■■□□□ 1.46
SSBP4-209ENST00000601357 AVPR1AP37288 418 aa24.2■■□□□ 1.46
SSBP4-209ENST00000601357 SOX9P48436 509 aa24.2■■□□□ 1.46
SSBP4-209ENST00000601357 AP3M2P53677 418 aa24.2■■□□□ 1.46
SSBP4-209ENST00000601357 TNNC1P63316 161 aa24.2■■□□□ 1.46
SSBP4-209ENST00000601357 TRPC3Q13507 836 aa24.2■■□□□ 1.46
SSBP4-209ENST00000601357 KRBA2Q6ZNG9 492 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms