RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 NME7Q9Y5B8 376 aa30.08■■■□□ 2.41
SSBP4-206ENST00000599699 PRR33A8MZF0 331 aa30.07■■■□□ 2.4
SSBP4-206ENST00000599699 MCCD1P59942 119 aaPredicted RBP30.07■■■□□ 2.4
SSBP4-206ENST00000599699 NOP14P78316 857 aaKnown RBP30.07■■■□□ 2.4
SSBP4-206ENST00000599699 NRG2O14511 850 aaPredicted RBP30.06■■■□□ 2.4
SSBP4-206ENST00000599699 MOSPD3O75425 235 aa30.06■■■□□ 2.4
SSBP4-206ENST00000599699 BDNFP23560 247 aa30.06■■■□□ 2.4
SSBP4-206ENST00000599699 GABRR2P28476 465 aa30.06■■■□□ 2.4
SSBP4-206ENST00000599699 FOXR2Q6PJQ5 311 aa30.06■■■□□ 2.4
SSBP4-206ENST00000599699 FRMD5Q7Z6J6 570 aa30.06■■■□□ 2.4
SSBP4-206ENST00000599699 B3GALNT2Q8NCR0 500 aa30.06■■■□□ 2.4
SSBP4-206ENST00000599699 FBXL13Q8NEE6 735 aa30.06■■■□□ 2.4
SSBP4-206ENST00000599699 PCED1BQ96HM7 432 aa30.06■■■□□ 2.4
SSBP4-206ENST00000599699 GCNAQ96QF7 691 aa30.06■■■□□ 2.4
SSBP4-206ENST00000599699 KXD1Q9BQD3 176 aa30.06■■■□□ 2.4
SSBP4-206ENST00000599699 ATXN3LQ9H3M9 355 aa30.06■■■□□ 2.4
SSBP4-206ENST00000599699 MAGED2Q9UNF1 606 aaPredicted RBP30.06■■■□□ 2.4
SSBP4-206ENST00000599699 DUSP12Q9UNI6 340 aa30.06■■■□□ 2.4
SSBP4-206ENST00000599699 NARSO43776 548 aaKnown RBP30.05■■■□□ 2.4
SSBP4-206ENST00000599699 MAGEA11P43364 429 aa30.05■■■□□ 2.4
SSBP4-206ENST00000599699 ASPAP45381 313 aa30.05■■■□□ 2.4
SSBP4-206ENST00000599699 STKLD1Q8NE28 680 aa30.05■■■□□ 2.4
SSBP4-206ENST00000599699 TNIP3Q96KP6 325 aa30.05■■■□□ 2.4
SSBP4-206ENST00000599699 RPP25Q9BUL9 199 aaKnown RBP30.05■■■□□ 2.4
SSBP4-206ENST00000599699 NIF3L1Q9GZT8 377 aa30.05■■■□□ 2.4
SSBP4-206ENST00000599699 APOBEC3GQ9HC16 384 aaKnown RBP30.05■■■□□ 2.4
SSBP4-206ENST00000599699 RAB20Q9NX57 234 aa30.05■■■□□ 2.4
SSBP4-206ENST00000599699 CSH1P0DML2 217 aa30.04■■■□□ 2.4
SSBP4-206ENST00000599699 CSH2P0DML3 217 aa30.04■■■□□ 2.4
SSBP4-206ENST00000599699 GRIK1P39086 918 aa30.04■■■□□ 2.4
SSBP4-206ENST00000599699 CBWD6Q4V339 395 aa30.04■■■□□ 2.4
SSBP4-206ENST00000599699 ARHGAP15Q53QZ3 475 aa30.04■■■□□ 2.4
SSBP4-206ENST00000599699 WDR44Q5JSH3 913 aa30.04■■■□□ 2.4
SSBP4-206ENST00000599699 CBWD3Q5JTY5 395 aa30.04■■■□□ 2.4
SSBP4-206ENST00000599699 CBWD5Q5RIA9 395 aa30.04■■■□□ 2.4
SSBP4-206ENST00000599699 VSTM1Q6UX27 236 aa30.04■■■□□ 2.4
SSBP4-206ENST00000599699 GAREM2Q75VX8 874 aa30.04■■■□□ 2.4
SSBP4-206ENST00000599699 SEMA4DQ92854 862 aa30.04■■■□□ 2.4
SSBP4-206ENST00000599699 PBXIP1Q96AQ6 731 aa30.04■■■□□ 2.4
SSBP4-206ENST00000599699 ZSWIM3Q96MP5 696 aa30.04■■■□□ 2.4
SSBP4-206ENST00000599699 FBXL21Q9UKT6 434 aa30.04■■■□□ 2.4
SSBP4-206ENST00000599699 FGFR1OPO95684 399 aaKnown RBP30.03■■■□□ 2.4
SSBP4-206ENST00000599699 CDC25CP30307 473 aa30.03■■■□□ 2.4
SSBP4-206ENST00000599699 NDST1P52848 882 aa30.03■■■□□ 2.4
SSBP4-206ENST00000599699 FAM78AQ5JUQ0 283 aa30.03■■■□□ 2.4
SSBP4-206ENST00000599699 POTEHQ6S545 545 aa30.03■■■□□ 2.4
SSBP4-206ENST00000599699 HFE2Q6ZVN8 426 aa30.03■■■□□ 2.4
SSBP4-206ENST00000599699 MLKLQ8NB16 471 aa30.03■■■□□ 2.4
SSBP4-206ENST00000599699 SLC35C1Q96A29 364 aa30.03■■■□□ 2.4
SSBP4-206ENST00000599699 SRRTQ9BXP5 876 aaKnown RBP30.03■■■□□ 2.4
SSBP4-206ENST00000599699 GPR88Q9GZN0 384 aa30.03■■■□□ 2.4
SSBP4-206ENST00000599699 RWDD2AQ9UIY3 292 aa30.03■■■□□ 2.4
SSBP4-206ENST00000599699 SLC38A8A6NNN8 435 aa30.02■■■□□ 2.4
SSBP4-206ENST00000599699 LRRN2O75325 713 aa30.02■■■□□ 2.4
SSBP4-206ENST00000599699 TRIM21P19474 475 aaKnown RBP30.02■■■□□ 2.4
SSBP4-206ENST00000599699 ANXA13P27216 316 aa30.02■■■□□ 2.4
SSBP4-206ENST00000599699 ORC1Q13415 861 aa30.02■■■□□ 2.4
SSBP4-206ENST00000599699 ACOT1Q86TX2 421 aa30.02■■■□□ 2.4
SSBP4-206ENST00000599699 ASIC4Q96FT7 647 aa30.02■■■□□ 2.4
SSBP4-206ENST00000599699 MED10Q9BTT4 135 aa30.02■■■□□ 2.4
SSBP4-206ENST00000599699 BCO2Q9BYV7 579 aa30.02■■■□□ 2.4
SSBP4-206ENST00000599699 CYP3A43Q9HB55 503 aa30.02■■■□□ 2.4
SSBP4-206ENST00000599699 TECTAO75443 2155 aa30.01■■■□□ 2.4
SSBP4-206ENST00000599699 GNA14O95837 355 aa30.01■■■□□ 2.39
SSBP4-206ENST00000599699 CFHP08603 1231 aa30.01■■■□□ 2.39
SSBP4-206ENST00000599699 SRFP11831 508 aa30.01■■■□□ 2.39
SSBP4-206ENST00000599699 CD58P19256 250 aa30.01■■■□□ 2.39
SSBP4-206ENST00000599699 STXBP5Q5T5C0 1151 aa30.01■■■□□ 2.39
SSBP4-206ENST00000599699 GPR158Q5T848 1215 aa30.01■■■□□ 2.39
SSBP4-206ENST00000599699 TANGO2Q6ICL3 276 aa30.01■■■□□ 2.39
SSBP4-206ENST00000599699 UNC93AQ86WB7 457 aa30.01■■■□□ 2.39
SSBP4-206ENST00000599699 ZSCAN18Q8TBC5 510 aaPredicted RBP30.01■■■□□ 2.39
SSBP4-206ENST00000599699 SMARCD2Q92925 531 aa30.01■■■□□ 2.39
SSBP4-206ENST00000599699 ASB16Q96NS5 453 aa30.01■■■□□ 2.39
SSBP4-206ENST00000599699 B3GNT5Q9BYG0 378 aa30.01■■■□□ 2.39
SSBP4-206ENST00000599699 ELOVL4Q9GZR5 314 aa30.01■■■□□ 2.39
SSBP4-206ENST00000599699 ZFP14Q9HCL3 533 aa30.01■■■□□ 2.39
SSBP4-206ENST00000599699 HMGXB4Q9UGU5 601 aa30.01■■■□□ 2.39
SSBP4-206ENST00000599699 ATP8B3O60423 1300 aa30■■■□□ 2.39
SSBP4-206ENST00000599699 CLDN5O00501 218 aa30■■■□□ 2.39
SSBP4-206ENST00000599699 TRIM66O15016 1216 aa30■■■□□ 2.39
SSBP4-206ENST00000599699 ECI2O75521 394 aa30■■■□□ 2.39
SSBP4-206ENST00000599699 HMGA1P17096 107 aaKnown RBP30■■■□□ 2.39
SSBP4-206ENST00000599699 CYP4F8P98187 520 aa30■■■□□ 2.39
SSBP4-206ENST00000599699 GPT2Q8TD30 523 aa30■■■□□ 2.39
SSBP4-206ENST00000599699 ZNF518BQ9C0D4 1074 aa30■■■□□ 2.39
SSBP4-206ENST00000599699 IL21Q9HBE4 155 aa30■■■□□ 2.39
SSBP4-206ENST00000599699 UXTQ9UBK9 157 aaPredicted RBP30■■■□□ 2.39
SSBP4-206ENST00000599699 ELSPBP1Q96BH3 223 aa29.99■■■□□ 2.39
SSBP4-206ENST00000599699 DNAI2Q9GZS0 605 aa29.99■■■□□ 2.39
SSBP4-206ENST00000599699 F8VP50 259 aa29.98■■■□□ 2.39
SSBP4-206ENST00000599699 NOL4O94818 638 aa29.98■■■□□ 2.39
SSBP4-206ENST00000599699 FMO5P49326 533 aa29.98■■■□□ 2.39
SSBP4-206ENST00000599699 NLRP12P59046 1061 aa29.98■■■□□ 2.39
SSBP4-206ENST00000599699 CREBRFQ8IUR6 639 aa29.98■■■□□ 2.39
SSBP4-206ENST00000599699 SPATA17Q96L03 361 aa29.98■■■□□ 2.39
SSBP4-206ENST00000599699 MFSD1Q9H3U5 465 aa29.98■■■□□ 2.39
SSBP4-206ENST00000599699 COQ4Q9Y3A0 265 aa29.98■■■□□ 2.39
SSBP4-206ENST00000599699 CCDC192P0DO97 292 aa29.97■■■□□ 2.39
SSBP4-206ENST00000599699 FCARP24071 287 aa29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms