RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 ZNF852Q6ZMS4 543 aa15.32■□□□□ 0.04
IRF3-224ENST00000599680 GPIHBP1Q8IV16 184 aa15.32■□□□□ 0.04
IRF3-224ENST00000599680 MRPS31Q92665 395 aaKnown RBP15.32■□□□□ 0.04
IRF3-224ENST00000599680 NELL2Q99435 816 aa15.32■□□□□ 0.04
IRF3-224ENST00000599680 BCO2Q9BYV7 579 aa15.32■□□□□ 0.04
IRF3-224ENST00000599680 DMAC2Q9NW81 257 aa15.32■□□□□ 0.04
IRF3-224ENST00000599680 RMND1Q9NWS8 449 aa15.32■□□□□ 0.04
IRF3-224ENST00000599680 MAPK8IP1Q9UQF2 711 aa15.32■□□□□ 0.04
IRF3-224ENST00000599680 FAM170BA6NMN3 283 aa15.31■□□□□ 0.04
IRF3-224ENST00000599680 MAN2B1O00754 1011 aa15.31■□□□□ 0.04
IRF3-224ENST00000599680 TACC1O75410 805 aa15.31■□□□□ 0.04
IRF3-224ENST00000599680 STAU1O95793 577 aaKnown RBP15.31■□□□□ 0.04
IRF3-224ENST00000599680 P4HA1P13674 534 aa15.31■□□□□ 0.04
IRF3-224ENST00000599680 NR2F2P24468 414 aa15.31■□□□□ 0.04
IRF3-224ENST00000599680 LMO2P25791 158 aa15.31■□□□□ 0.04
IRF3-224ENST00000599680 RPL13P26373 211 aaKnown RBP15.31■□□□□ 0.04
IRF3-224ENST00000599680 AVPR1AP37288 418 aa15.31■□□□□ 0.04
IRF3-224ENST00000599680 MAGEA11P43364 429 aa15.31■□□□□ 0.04
IRF3-224ENST00000599680 NLRP12P59046 1061 aa15.31■□□□□ 0.04
IRF3-224ENST00000599680 NCOA4Q13772 614 aa15.31■□□□□ 0.04
IRF3-224ENST00000599680 CCDC142Q17RM4 750 aa15.31■□□□□ 0.04
IRF3-224ENST00000599680 ZNF667Q5HYK9 610 aa15.31■□□□□ 0.04
IRF3-224ENST00000599680 TDRD10Q5VZ19 366 aaKnown RBP15.31■□□□□ 0.04
IRF3-224ENST00000599680 LIMS2Q7Z4I7 341 aa15.31■□□□□ 0.04
IRF3-224ENST00000599680 GUF1Q8N442 669 aaKnown RBP15.31■□□□□ 0.04
IRF3-224ENST00000599680 STKLD1Q8NE28 680 aa15.31■□□□□ 0.04
IRF3-224ENST00000599680 PLEKHO2Q8TD55 490 aa15.31■□□□□ 0.04
IRF3-224ENST00000599680 TMC2Q8TDI7 906 aa15.31■□□□□ 0.04
IRF3-224ENST00000599680 MYLPFQ96A32 169 aa15.31■□□□□ 0.04
IRF3-224ENST00000599680 PHOX2BQ99453 314 aa15.31■□□□□ 0.04
IRF3-224ENST00000599680 PKMYT1Q99640 499 aa15.31■□□□□ 0.04
IRF3-224ENST00000599680 MRPL45Q9BRJ2 306 aaKnown RBP15.31■□□□□ 0.04
IRF3-224ENST00000599680 DDX23Q9BUQ8 820 aaKnown RBP15.31■□□□□ 0.04
IRF3-224ENST00000599680 OSBPL6Q9BZF3 934 aa15.31■□□□□ 0.04
IRF3-224ENST00000599680 IL21Q9HBE4 155 aa15.31■□□□□ 0.04
IRF3-224ENST00000599680 LTB4R2Q9NPC1 389 aa15.31■□□□□ 0.04
IRF3-224ENST00000599680 HOOK1Q9UJC3 728 aaKnown RBP15.31■□□□□ 0.04
IRF3-224ENST00000599680 TRAF3IP3Q9Y228 551 aa15.31■□□□□ 0.04
IRF3-224ENST00000599680 FANCMQ8IYD8 2048 aa15.31■□□□□ 0.04
IRF3-224ENST00000599680 SLC38A8A6NNN8 435 aa15.3■□□□□ 0.04
IRF3-224ENST00000599680 A8MXQ7 604 aa15.3■□□□□ 0.04
IRF3-224ENST00000599680 CHADO15335 359 aa15.3■□□□□ 0.04
IRF3-224ENST00000599680 FAM163BP0C2L3 166 aa15.3■□□□□ 0.04
IRF3-224ENST00000599680 KRT13P13646 458 aa15.3■□□□□ 0.04
IRF3-224ENST00000599680 HMGA1P17096 107 aaKnown RBP15.3■□□□□ 0.04
IRF3-224ENST00000599680 BDNFP23560 247 aa15.3■□□□□ 0.04
IRF3-224ENST00000599680 DDX6P26196 483 aaKnown RBP eCLIP15.3■□□□□ 0.04
IRF3-224ENST00000599680 GRIK1P39086 918 aa15.3■□□□□ 0.04
IRF3-224ENST00000599680 KPNA1P52294 538 aaPredicted RBP15.3■□□□□ 0.04
IRF3-224ENST00000599680 PNOCQ13519 176 aa15.3■□□□□ 0.04
IRF3-224ENST00000599680 ARHGAP29Q52LW3 1261 aa15.3■□□□□ 0.04
IRF3-224ENST00000599680 MDH1BQ5I0G3 518 aa15.3■□□□□ 0.04
IRF3-224ENST00000599680 FAM171BQ6P995 826 aa15.3■□□□□ 0.04
IRF3-224ENST00000599680 VSTM1Q6UX27 236 aa15.3■□□□□ 0.04
IRF3-224ENST00000599680 SCARA5Q6ZMJ2 495 aa15.3■□□□□ 0.04
IRF3-224ENST00000599680 CMTM8Q8IZV2 173 aa15.3■□□□□ 0.04
IRF3-224ENST00000599680 MAB21L3Q8N8X9 362 aa15.3■□□□□ 0.04
IRF3-224ENST00000599680 MYCBPAPQ8TBZ2 947 aa15.3■□□□□ 0.04
IRF3-224ENST00000599680 TMEM174Q8WUU8 243 aa15.3■□□□□ 0.04
IRF3-224ENST00000599680 TRMT2BQ96GJ1 504 aaKnown RBP15.3■□□□□ 0.04
IRF3-224ENST00000599680 GZF1Q9H116 711 aaPredicted RBP15.3■□□□□ 0.04
IRF3-224ENST00000599680 CRTAC1Q9NQ79 661 aa15.3■□□□□ 0.04
IRF3-224ENST00000599680 TRPV5Q9NQA5 729 aa15.3■□□□□ 0.04
IRF3-224ENST00000599680 THG1LQ9NWX6 298 aaKnown RBP15.3■□□□□ 0.04
IRF3-224ENST00000599680 OBP2AQ9NY56 170 aa15.3■□□□□ 0.04
IRF3-224ENST00000599680 NDRG2Q9UN36 371 aaKnown RBP15.3■□□□□ 0.04
IRF3-224ENST00000599680 PIAS3Q9Y6X2 628 aa15.3■□□□□ 0.04
IRF3-224ENST00000599680 CACNA1IQ9P0X4 2223 aa15.29■□□□□ 0.04
IRF3-224ENST00000599680 ATP8B3O60423 1300 aa15.29■□□□□ 0.04
IRF3-224ENST00000599680 LRRN2O75325 713 aa15.29■□□□□ 0.04
IRF3-224ENST00000599680 NOL4O94818 638 aa15.29■□□□□ 0.04
IRF3-224ENST00000599680 SMC2O95347 1197 aa15.29■□□□□ 0.04
IRF3-224ENST00000599680 TRIM21P19474 475 aaKnown RBP15.29■□□□□ 0.04
IRF3-224ENST00000599680 PIK3CAP42336 1068 aa15.29■□□□□ 0.04
IRF3-224ENST00000599680 MAGEA9P43362 315 aa15.29■□□□□ 0.04
IRF3-224ENST00000599680 DLG4P78352 724 aa15.29■□□□□ 0.04
IRF3-224ENST00000599680 CLDN10P78369 228 aa15.29■□□□□ 0.04
IRF3-224ENST00000599680 FAM160A1Q05DH4 1040 aa15.29■□□□□ 0.04
IRF3-224ENST00000599680 INTS8Q75QN2 995 aaKnown RBP15.29■□□□□ 0.04
IRF3-224ENST00000599680 FAM186BQ8IYM0 893 aa15.29■□□□□ 0.04
IRF3-224ENST00000599680 FMR1NBQ8N0W7 255 aaPredicted RBP15.29■□□□□ 0.04
IRF3-224ENST00000599680 CELF5Q8N6W0 485 aaKnown RBP15.29■□□□□ 0.04
IRF3-224ENST00000599680 BPIFB1Q8TDL5 484 aa15.29■□□□□ 0.04
IRF3-224ENST00000599680 RSPRY1Q96DX4 576 aa15.29■□□□□ 0.04
IRF3-224ENST00000599680 MKNK1Q9BUB5 465 aa15.29■□□□□ 0.04
IRF3-224ENST00000599680 SLC46A2Q9BY10 475 aa15.29■□□□□ 0.04
IRF3-224ENST00000599680 IMPG2Q9BZV3 1241 aa15.29■□□□□ 0.04
IRF3-224ENST00000599680 TRPC7Q9HCX4 862 aa15.29■□□□□ 0.04
IRF3-224ENST00000599680 SPATA6Q9NWH7 488 aaPredicted RBP15.29■□□□□ 0.04
IRF3-224ENST00000599680 EHD2Q9NZN4 543 aa15.29■□□□□ 0.04
IRF3-224ENST00000599680 NCANO14594 1321 aa15.28■□□□□ 0.04
IRF3-224ENST00000599680 IKBKBO14920 756 aa15.28■□□□□ 0.04
IRF3-224ENST00000599680 TRIM66O15016 1216 aa15.28■□□□□ 0.04
IRF3-224ENST00000599680 MAPK13O15264 365 aa15.28■□□□□ 0.04
IRF3-224ENST00000599680 PRAMEF12O95522 483 aa15.28■□□□□ 0.04
IRF3-224ENST00000599680 F11P03951 625 aa15.28■□□□□ 0.04
IRF3-224ENST00000599680 C4BPAP04003 597 aaKnown RBP15.28■□□□□ 0.04
IRF3-224ENST00000599680 PTPN1P18031 435 aaKnown RBP15.28■□□□□ 0.04
IRF3-224ENST00000599680 WEE1P30291 646 aa15.28■□□□□ 0.04
IRF3-224ENST00000599680 PSMC2P35998 433 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms