RNA–Protein interactions for RNA: ENST00000599227.5

ZNF544-213, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-213ENST00000599227 ZMYND8Q9ULU4 1186 aaPredicted RBP11.77□□□□□ -0.52
ZNF544-213ENST00000599227 NFKBIEO00221 500 aa11.77□□□□□ -0.53
ZNF544-213ENST00000599227 TJP3O95049 919 aa11.77□□□□□ -0.53
ZNF544-213ENST00000599227 CD48P09326 243 aa11.77□□□□□ -0.53
ZNF544-213ENST00000599227 UNGP13051 313 aaPredicted RBP11.77□□□□□ -0.53
ZNF544-213ENST00000599227 ATP2A2P16615 1042 aaKnown RBP11.77□□□□□ -0.53
ZNF544-213ENST00000599227 OTUD4Q01804 1114 aaKnown RBP11.77□□□□□ -0.53
ZNF544-213ENST00000599227 STAT4Q14765 748 aa11.77□□□□□ -0.53
ZNF544-213ENST00000599227 XKR3Q5GH77 459 aa11.77□□□□□ -0.53
ZNF544-213ENST00000599227 LRRC6Q86X45 466 aa11.77□□□□□ -0.53
ZNF544-213ENST00000599227 MORC4Q8TE76 937 aa11.77□□□□□ -0.53
ZNF544-213ENST00000599227 P3H4Q92791 437 aa11.77□□□□□ -0.53
ZNF544-213ENST00000599227 KIF12Q96FN5 646 aa11.77□□□□□ -0.53
ZNF544-213ENST00000599227 STRA6Q9BX79 667 aa11.77□□□□□ -0.53
ZNF544-213ENST00000599227 RXFP1Q9HBX9 757 aa11.77□□□□□ -0.53
ZNF544-213ENST00000599227 TSR3Q9UJK0 312 aaKnown RBP11.77□□□□□ -0.53
ZNF544-213ENST00000599227 C15orf41Q9Y2V0 281 aa11.77□□□□□ -0.53
ZNF544-213ENST00000599227 CFAP73A6NFT4 308 aa11.77□□□□□ -0.53
ZNF544-213ENST00000599227 PLSCR1O15162 318 aa11.77□□□□□ -0.53
ZNF544-213ENST00000599227 MAPTP10636 758 aaKnown RBP11.77□□□□□ -0.53
ZNF544-213ENST00000599227 ACAT1P24752 427 aaKnown RBP11.77□□□□□ -0.53
ZNF544-213ENST00000599227 CTCFP49711 727 aaPredicted RBP11.77□□□□□ -0.53
ZNF544-213ENST00000599227 GDF10P55107 478 aa11.77□□□□□ -0.53
ZNF544-213ENST00000599227 NCKAP1LP55160 1127 aa11.77□□□□□ -0.53
ZNF544-213ENST00000599227 CDH6P55285 790 aa11.77□□□□□ -0.53
ZNF544-213ENST00000599227 GSCP56915 257 aaPredicted RBP11.77□□□□□ -0.53
ZNF544-213ENST00000599227 BPIFB4P59827 614 aa11.77□□□□□ -0.53
ZNF544-213ENST00000599227 HIF1AQ16665 826 aa11.77□□□□□ -0.53
ZNF544-213ENST00000599227 CGB2Q6NT52 195 aa11.77□□□□□ -0.53
ZNF544-213ENST00000599227 NPNTQ6UXI9 565 aa11.77□□□□□ -0.53
ZNF544-213ENST00000599227 CENPUQ71F23 418 aa11.77□□□□□ -0.53
ZNF544-213ENST00000599227 ACOT1Q86TX2 421 aa11.77□□□□□ -0.53
ZNF544-213ENST00000599227 ABRAQ8N0Z2 381 aa11.77□□□□□ -0.53
ZNF544-213ENST00000599227 VPS52Q8N1B4 723 aa11.77□□□□□ -0.53
ZNF544-213ENST00000599227 AFG1LQ8WV93 481 aa11.77□□□□□ -0.53
ZNF544-213ENST00000599227 MCUR1Q96AQ8 359 aa11.77□□□□□ -0.53
ZNF544-213ENST00000599227 SLC17A7Q9P2U7 560 aa11.77□□□□□ -0.53
ZNF544-213ENST00000599227 NUDT5Q9UKK9 219 aa11.77□□□□□ -0.53
ZNF544-213ENST00000599227 BHMG1C9JSJ3 638 aaPredicted RBP11.76□□□□□ -0.53
ZNF544-213ENST00000599227 SCAMP3O14828 347 aaKnown RBP11.76□□□□□ -0.53
ZNF544-213ENST00000599227 MAPK13O15264 365 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 HCRTO43612 131 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 COL5A3P25940 1745 aaPredicted RBP11.76□□□□□ -0.53
ZNF544-213ENST00000599227 HOXD11P31277 338 aaPredicted RBP11.76□□□□□ -0.53
ZNF544-213ENST00000599227 ARL1P40616 181 aaPredicted RBP11.76□□□□□ -0.53
ZNF544-213ENST00000599227 NOMO3P69849 1222 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 NFIL3Q16649 462 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 CYP1B1Q16678 543 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 ISLR2Q6UXK2 745 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 MAGEB18Q96M61 343 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 APOL2Q9BQE5 337 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 SRRM3A6NNA2 597 aaPredicted RBP11.76□□□□□ -0.53
ZNF544-213ENST00000599227 POLR2BP30876 1174 aaKnown RBP11.76□□□□□ -0.53
ZNF544-213ENST00000599227 HSD17B4P51659 736 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 ATXN3P54252 364 aaPredicted RBP11.76□□□□□ -0.53
ZNF544-213ENST00000599227 CCNG2Q16589 344 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 FYB2Q5VWT5 728 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 PPM1NQ8N819 430 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 FBXO36Q8NEA4 188 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 MIEF2Q96C03 454 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 ANKRD36BP1Q96IX9 119 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 FAM111AQ96PZ2 611 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 CYTH2Q99418 400 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 MMP19Q99542 508 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 FBXO6Q9NRD1 293 aaPredicted RBP11.76□□□□□ -0.53
ZNF544-213ENST00000599227 SETD4Q9NVD3 440 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 PARVAQ9NVD7 372 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 FAM155BO75949 473 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 VNN1O95497 513 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 UBA1P22314 1058 aaKnown RBP11.76□□□□□ -0.53
ZNF544-213ENST00000599227 PTGER2P43116 358 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 OGDHQ02218 1023 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 BNIP1Q12981 228 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 MMRN1Q13201 1228 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 C15orf59Q2T9L4 293 aaPredicted RBP11.76□□□□□ -0.53
ZNF544-213ENST00000599227 ANKRD20A3Q5VUR7 823 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 DPY19L2Q6NUT2 758 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 VSIG10LQ86VR7 867 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 TCP10LQ8TDR4 215 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 ADPGKQ9BRR6 497 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 SIK2Q9H0K1 926 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 CYP39A1Q9NYL5 469 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 NOD1Q9Y239 953 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 CHKBQ9Y259 395 aa11.76□□□□□ -0.53
ZNF544-213ENST00000599227 MYO18AQ92614 2054 aaKnown RBP11.75□□□□□ -0.53
ZNF544-213ENST00000599227 TCRBV7S3A2A0A539 114 aa11.75□□□□□ -0.53
ZNF544-213ENST00000599227 EXTL3O43909 919 aa11.75□□□□□ -0.53
ZNF544-213ENST00000599227 OATP04181 439 aa11.75□□□□□ -0.53
ZNF544-213ENST00000599227 KRT3P12035 628 aa11.75□□□□□ -0.53
ZNF544-213ENST00000599227 GLRA2P23416 452 aa11.75□□□□□ -0.53
ZNF544-213ENST00000599227 RFC1P35251 1148 aaPredicted RBP11.75□□□□□ -0.53
ZNF544-213ENST00000599227 ADCYAP1R1P41586 468 aa11.75□□□□□ -0.53
ZNF544-213ENST00000599227 MUM1Q2TAK8 710 aa11.75□□□□□ -0.53
ZNF544-213ENST00000599227 ANKRD20A2Q5SQ80 823 aa11.75□□□□□ -0.53
ZNF544-213ENST00000599227 ANKRD20A1Q5TYW2 823 aa11.75□□□□□ -0.53
ZNF544-213ENST00000599227 FAM160B1Q5W0V3 765 aa11.75□□□□□ -0.53
ZNF544-213ENST00000599227 MFSD5Q6N075 450 aa11.75□□□□□ -0.53
ZNF544-213ENST00000599227 SPOCD1Q6ZMY3 1216 aa11.75□□□□□ -0.53
ZNF544-213ENST00000599227 NLRP9Q7RTR0 991 aa11.75□□□□□ -0.53
ZNF544-213ENST00000599227 TAS1R3Q7RTX0 852 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms