RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 C2orf15Q8WU43 125 aaKnown RBP21.41■■□□□ 1.02
IRF3-221ENST00000598808 RHOBTB2Q9BYZ6 727 aa21.41■■□□□ 1.02
IRF3-221ENST00000598808 PRKD2Q9BZL6 878 aa21.41■■□□□ 1.02
IRF3-221ENST00000598808 S1PR5Q9H228 398 aa21.41■■□□□ 1.02
IRF3-221ENST00000598808 CRISPLD1Q9H336 500 aa21.41■■□□□ 1.02
IRF3-221ENST00000598808 CISHQ9NSE2 258 aa21.41■■□□□ 1.02
IRF3-221ENST00000598808 IFNKQ9P0W0 207 aa21.41■■□□□ 1.02
IRF3-221ENST00000598808 MAFFQ9ULX9 164 aa21.41■■□□□ 1.02
IRF3-221ENST00000598808 VNN2O95498 520 aa21.4■■□□□ 1.02
IRF3-221ENST00000598808 IL9P15248 144 aa21.4■■□□□ 1.02
IRF3-221ENST00000598808 SP100P23497 879 aaPredicted RBP21.4■■□□□ 1.02
IRF3-221ENST00000598808 MTHFRP42898 656 aa21.4■■□□□ 1.02
IRF3-221ENST00000598808 UBASH3AP57075 661 aa21.4■■□□□ 1.02
IRF3-221ENST00000598808 PLD1Q13393 1074 aa21.4■■□□□ 1.02
IRF3-221ENST00000598808 GPR149Q86SP6 731 aa21.4■■□□□ 1.02
IRF3-221ENST00000598808 ARHGEF19Q8IW93 802 aa21.4■■□□□ 1.02
IRF3-221ENST00000598808 SCN4BQ8IWT1 228 aa21.4■■□□□ 1.02
IRF3-221ENST00000598808 CMASQ8NFW8 434 aaPredicted RBP21.4■■□□□ 1.02
IRF3-221ENST00000598808 NT5C1AQ9BXI3 368 aa21.4■■□□□ 1.02
IRF3-221ENST00000598808 XPO4Q9C0E2 1151 aaKnown RBP21.4■■□□□ 1.02
IRF3-221ENST00000598808 FAM49BQ9NUQ9 324 aa21.4■■□□□ 1.02
IRF3-221ENST00000598808 ZNF500O60304 480 aaPredicted RBP21.39■■□□□ 1.02
IRF3-221ENST00000598808 ATP1A3P13637 1013 aa21.39■■□□□ 1.02
IRF3-221ENST00000598808 SLC9A1P19634 815 aa21.39■■□□□ 1.02
IRF3-221ENST00000598808 CYP2F1P24903 491 aa21.39■■□□□ 1.02
IRF3-221ENST00000598808 TUFMP49411 452 aaKnown RBP21.39■■□□□ 1.02
IRF3-221ENST00000598808 COPB1P53618 953 aaKnown RBP21.39■■□□□ 1.02
IRF3-221ENST00000598808 EPHB3P54753 998 aa21.39■■□□□ 1.02
IRF3-221ENST00000598808 CBX2Q14781 532 aaPredicted RBP21.39■■□□□ 1.02
IRF3-221ENST00000598808 TAF12Q16514 161 aa21.39■■□□□ 1.02
IRF3-221ENST00000598808 TRIM65Q6PJ69 517 aa21.39■■□□□ 1.02
IRF3-221ENST00000598808 UNC93AQ86WB7 457 aa21.39■■□□□ 1.02
IRF3-221ENST00000598808 TTC39CQ8N584 583 aa21.39■■□□□ 1.02
IRF3-221ENST00000598808 SPC24Q8NBT2 197 aa21.39■■□□□ 1.02
IRF3-221ENST00000598808 MYCBPAPQ8TBZ2 947 aa21.39■■□□□ 1.02
IRF3-221ENST00000598808 PCED1BQ96HM7 432 aa21.39■■□□□ 1.02
IRF3-221ENST00000598808 PCMTD1Q96MG8 357 aaPredicted RBP21.39■■□□□ 1.02
IRF3-221ENST00000598808 UBE2TQ9NPD8 197 aaPredicted RBP21.39■■□□□ 1.02
IRF3-221ENST00000598808 ATP8B3O60423 1300 aa21.39■■□□□ 1.02
IRF3-221ENST00000598808 TCF20Q9UGU0 1960 aaKnown RBP21.39■■□□□ 1.01
IRF3-221ENST00000598808 CILPO75339 1184 aa21.39■■□□□ 1.01
IRF3-221ENST00000598808 BDNFP23560 247 aa21.39■■□□□ 1.01
IRF3-221ENST00000598808 HOXA9P31269 272 aa21.39■■□□□ 1.01
IRF3-221ENST00000598808 INCA1Q0VD86 236 aa21.39■■□□□ 1.01
IRF3-221ENST00000598808 VEPH1Q14D04 833 aa21.39■■□□□ 1.01
IRF3-221ENST00000598808 IQCEQ6IPM2 695 aa21.39■■□□□ 1.01
IRF3-221ENST00000598808 GRASPQ7Z6J2 395 aaPredicted RBP21.39■■□□□ 1.01
IRF3-221ENST00000598808 LMO3Q8TAP4 145 aa21.39■■□□□ 1.01
IRF3-221ENST00000598808 GIPC2Q8TF65 315 aa21.39■■□□□ 1.01
IRF3-221ENST00000598808 KAT5Q92993 513 aa21.39■■□□□ 1.01
IRF3-221ENST00000598808 ZNF707Q96C28 371 aaPredicted RBP21.39■■□□□ 1.01
IRF3-221ENST00000598808 FAXDC2Q96IV6 333 aa21.39■■□□□ 1.01
IRF3-221ENST00000598808 NECTIN4Q96NY8 510 aa21.39■■□□□ 1.01
IRF3-221ENST00000598808 TWNKQ96RR1 684 aa21.39■■□□□ 1.01
IRF3-221ENST00000598808 PKMYT1Q99640 499 aa21.39■■□□□ 1.01
IRF3-221ENST00000598808 PCDHB4Q9Y5E5 795 aa21.39■■□□□ 1.01
IRF3-221ENST00000598808 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.39■■□□□ 1.01
IRF3-221ENST00000598808 GTPBP10A4D1E9 387 aaKnown RBP21.38■■□□□ 1.01
IRF3-221ENST00000598808 CLDN5O00501 218 aa21.38■■□□□ 1.01
IRF3-221ENST00000598808 HAPLN1P10915 354 aaPredicted RBP21.38■■□□□ 1.01
IRF3-221ENST00000598808 BMP1P13497 986 aa21.38■■□□□ 1.01
IRF3-221ENST00000598808 KRT5P13647 590 aa21.38■■□□□ 1.01
IRF3-221ENST00000598808 CCDC130P13994 396 aa21.38■■□□□ 1.01
IRF3-221ENST00000598808 CLCN1P35523 988 aa21.38■■□□□ 1.01
IRF3-221ENST00000598808 APBA1Q02410 837 aa21.38■■□□□ 1.01
IRF3-221ENST00000598808 SDHAF4Q5VUM1 108 aa21.38■■□□□ 1.01
IRF3-221ENST00000598808 FAM171BQ6P995 826 aa21.38■■□□□ 1.01
IRF3-221ENST00000598808 RTL10Q7L3V2 364 aa21.38■■□□□ 1.01
IRF3-221ENST00000598808 GPR152Q8TDT2 470 aa21.38■■□□□ 1.01
IRF3-221ENST00000598808 ZNF512Q96ME7 567 aaPredicted RBP21.38■■□□□ 1.01
IRF3-221ENST00000598808 CORO1BQ9BR76 489 aa21.38■■□□□ 1.01
IRF3-221ENST00000598808 LSM14BQ9BX40 385 aaKnown RBP21.38■■□□□ 1.01
IRF3-221ENST00000598808 ELOVL4Q9GZR5 314 aa21.38■■□□□ 1.01
IRF3-221ENST00000598808 HCFC1R1Q9NWW0 138 aa21.38■■□□□ 1.01
IRF3-221ENST00000598808 LIMA1Q9UHB6 759 aaKnown RBP21.38■■□□□ 1.01
IRF3-221ENST00000598808 C2orf16Q68DN1 1984 aa21.37■■□□□ 1.01
IRF3-221ENST00000598808 PON1P27169 355 aa21.37■■□□□ 1.01
IRF3-221ENST00000598808 ANXA13P27216 316 aa21.37■■□□□ 1.01
IRF3-221ENST00000598808 ADORA2BP29275 332 aa21.37■■□□□ 1.01
IRF3-221ENST00000598808 GRIK1P39086 918 aa21.37■■□□□ 1.01
IRF3-221ENST00000598808 GPR15P49685 360 aa21.37■■□□□ 1.01
IRF3-221ENST00000598808 ARHGAP44Q17R89 818 aa21.37■■□□□ 1.01
IRF3-221ENST00000598808 GJB7Q6PEY0 223 aa21.37■■□□□ 1.01
IRF3-221ENST00000598808 TMEM270Q6UE05 265 aa21.37■■□□□ 1.01
IRF3-221ENST00000598808 CCDC186Q7Z3E2 898 aa21.37■■□□□ 1.01
IRF3-221ENST00000598808 FUBP3Q96I24 572 aaKnown RBP eCLIP21.37■■□□□ 1.01
IRF3-221ENST00000598808 HEXIM2Q96MH2 286 aaKnown RBP21.37■■□□□ 1.01
IRF3-221ENST00000598808 ZNF518BQ9C0D4 1074 aa21.37■■□□□ 1.01
IRF3-221ENST00000598808 POMKQ9H5K3 350 aa21.37■■□□□ 1.01
IRF3-221ENST00000598808 ABCB6Q9NP58 842 aa21.37■■□□□ 1.01
IRF3-221ENST00000598808 CLUHO75153 1309 aa21.36■■□□□ 1.01
IRF3-221ENST00000598808 CD19P15391 556 aa21.36■■□□□ 1.01
IRF3-221ENST00000598808 USP8P40818 1118 aa21.36■■□□□ 1.01
IRF3-221ENST00000598808 RPL10AP62906 217 aaKnown RBP21.36■■□□□ 1.01
IRF3-221ENST00000598808 NTHL1P78549 312 aa21.36■■□□□ 1.01
IRF3-221ENST00000598808 UBXN1Q04323 297 aa21.36■■□□□ 1.01
IRF3-221ENST00000598808 SMAD2Q15796 467 aaKnown RBP21.36■■□□□ 1.01
IRF3-221ENST00000598808 DDR2Q16832 855 aa21.36■■□□□ 1.01
IRF3-221ENST00000598808 FILIP1LQ4L180 1135 aa21.36■■□□□ 1.01
IRF3-221ENST00000598808 PABPC1LQ4VXU2 614 aaKnown RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms