RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 YAF2Q8IY57 180 aa14.73□□□□□ -0.05
SCAF1-203ENST00000598359 MAML2Q8IZL2 1156 aaPredicted RBP14.73□□□□□ -0.05
SCAF1-203ENST00000598359 DEPDC1BQ8WUY9 529 aa14.73□□□□□ -0.05
SCAF1-203ENST00000598359 GCNAQ96QF7 691 aa14.73□□□□□ -0.05
SCAF1-203ENST00000598359 KCTD10Q9H3F6 313 aa14.73□□□□□ -0.05
SCAF1-203ENST00000598359 TASP1Q9H6P5 420 aa14.73□□□□□ -0.05
SCAF1-203ENST00000598359 CRTAC1Q9NQ79 661 aa14.73□□□□□ -0.05
SCAF1-203ENST00000598359 SPATA6Q9NWH7 488 aaPredicted RBP14.73□□□□□ -0.05
SCAF1-203ENST00000598359 USP25Q9UHP3 1055 aa14.73□□□□□ -0.05
SCAF1-203ENST00000598359 PIAS3Q9Y6X2 628 aa14.73□□□□□ -0.05
SCAF1-203ENST00000598359 FAM237AA0A1B0GTK4 181 aa14.72□□□□□ -0.05
SCAF1-203ENST00000598359 MED19A0JLT2 244 aaPredicted RBP14.72□□□□□ -0.05
SCAF1-203ENST00000598359 SLC38A8A6NNN8 435 aa14.72□□□□□ -0.05
SCAF1-203ENST00000598359 LRRIQ3A6PVS8 624 aaPredicted RBP14.72□□□□□ -0.05
SCAF1-203ENST00000598359 ARNTLO00327 626 aa14.72□□□□□ -0.05
SCAF1-203ENST00000598359 DPYSL4O14531 572 aa14.72□□□□□ -0.05
SCAF1-203ENST00000598359 FGF19O95750 216 aa14.72□□□□□ -0.05
SCAF1-203ENST00000598359 F11P03951 625 aa14.72□□□□□ -0.05
SCAF1-203ENST00000598359 WARSP23381 471 aaKnown RBP14.72□□□□□ -0.05
SCAF1-203ENST00000598359 NLRP12P59046 1061 aa14.72□□□□□ -0.05
SCAF1-203ENST00000598359 DLG4P78352 724 aa14.72□□□□□ -0.05
SCAF1-203ENST00000598359 PSMD2Q13200 908 aa14.72□□□□□ -0.05
SCAF1-203ENST00000598359 FZD5Q13467 585 aa14.72□□□□□ -0.05
SCAF1-203ENST00000598359 SKOR2Q2VWA4 1001 aaPredicted RBP14.72□□□□□ -0.05
SCAF1-203ENST00000598359 WDR72Q3MJ13 1102 aa14.72□□□□□ -0.05
SCAF1-203ENST00000598359 TXNDC8Q6A555 127 aa14.72□□□□□ -0.05
SCAF1-203ENST00000598359 MAB21L3Q8N8X9 362 aa14.72□□□□□ -0.05
SCAF1-203ENST00000598359 MYLPFQ96A32 169 aa14.72□□□□□ -0.05
SCAF1-203ENST00000598359 BCO2Q9BYV7 579 aa14.72□□□□□ -0.05
SCAF1-203ENST00000598359 SCAND2PQ9GZW5 306 aaPredicted RBP14.72□□□□□ -0.05
SCAF1-203ENST00000598359 DMAC2Q9NW81 257 aa14.72□□□□□ -0.05
SCAF1-203ENST00000598359 CGNQ9P2M7 1197 aaKnown RBP14.72□□□□□ -0.05
SCAF1-203ENST00000598359 NXF1Q9UBU9 619 aaKnown RBP14.72□□□□□ -0.05
SCAF1-203ENST00000598359 MAPK8IP1Q9UQF2 711 aa14.72□□□□□ -0.05
SCAF1-203ENST00000598359 CCL26Q9Y258 94 aa14.72□□□□□ -0.05
SCAF1-203ENST00000598359 MIA3Q5JRA6 1907 aa14.72□□□□□ -0.05
SCAF1-203ENST00000598359 GOLGA6L22H0YM25 854 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 PHACTR2O75167 634 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 TADA3O75528 432 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 KRT37O76014 449 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 CLSTN1O94985 981 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 NR3C1P04150 777 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 SP9P0CG40 484 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 BDNFP23560 247 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 CCNE1P24864 410 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 RPL10AP62906 217 aaKnown RBP14.71□□□□□ -0.05
SCAF1-203ENST00000598359 CYP27A1Q02318 531 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 TNK2Q07912 1038 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 FCHO2Q0JRZ9 810 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 DPYDQ12882 1025 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 BIRC3Q13489 604 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 TRPC3Q13507 836 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 MDH1BQ5I0G3 518 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 TDRD10Q5VZ19 366 aaKnown RBP14.71□□□□□ -0.05
SCAF1-203ENST00000598359 FAM171BQ6P995 826 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 KRBA2Q6ZNG9 492 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 DPH6Q7L8W6 267 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 ZNF687Q8N1G0 1237 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 GOLGA5Q8TBA6 731 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 SPATA18Q8TC71 538 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 PARD3BQ8TEW8 1205 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 XYLT2Q9H1B5 865 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 SNX25Q9H3E2 840 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 DPEP3Q9H4B8 488 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 ABCB6Q9NP58 842 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 GTSE1Q9NYZ3 720 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 CDH9Q9ULB4 789 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 ATP6V1DQ9Y5K8 247 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 CACNA1GO43497 2377 aa14.71□□□□□ -0.05
SCAF1-203ENST00000598359 A0A1W2PQ27 194 aa14.7□□□□□ -0.06
SCAF1-203ENST00000598359 A0A1W2PQ64 194 aa14.7□□□□□ -0.06
SCAF1-203ENST00000598359 A0A1W2PQD8 194 aa14.7□□□□□ -0.06
SCAF1-203ENST00000598359 CHADO15335 359 aa14.7□□□□□ -0.06
SCAF1-203ENST00000598359 NOL4O94818 638 aa14.7□□□□□ -0.06
SCAF1-203ENST00000598359 VNN1O95497 513 aa14.7□□□□□ -0.06
SCAF1-203ENST00000598359 CSH1P0DML2 217 aa14.7□□□□□ -0.06
SCAF1-203ENST00000598359 CSH2P0DML3 217 aa14.7□□□□□ -0.06
SCAF1-203ENST00000598359 GNL1P36915 607 aaPredicted RBP14.7□□□□□ -0.06
SCAF1-203ENST00000598359 RAP1GAPP47736 663 aa14.7□□□□□ -0.06
SCAF1-203ENST00000598359 KPNA1P52294 538 aaPredicted RBP14.7□□□□□ -0.06
SCAF1-203ENST00000598359 CDH8P55286 799 aa14.7□□□□□ -0.06
SCAF1-203ENST00000598359 TNNC1P63316 161 aa14.7□□□□□ -0.06
SCAF1-203ENST00000598359 CFAP221Q4G0U5 840 aa14.7□□□□□ -0.06
SCAF1-203ENST00000598359 CEP135Q66GS9 1140 aa14.7□□□□□ -0.06
SCAF1-203ENST00000598359 TSSK4Q6SA08 328 aa14.7□□□□□ -0.06
SCAF1-203ENST00000598359 SCARA5Q6ZMJ2 495 aa14.7□□□□□ -0.06
SCAF1-203ENST00000598359 CMTM8Q8IZV2 173 aa14.7□□□□□ -0.06
SCAF1-203ENST00000598359 TTC16Q8NEE8 873 aa14.7□□□□□ -0.06
SCAF1-203ENST00000598359 OR6B3Q8NGW1 331 aa14.7□□□□□ -0.06
SCAF1-203ENST00000598359 RIN3Q8TB24 985 aa14.7□□□□□ -0.06
SCAF1-203ENST00000598359 CSGALNACT1Q8TDX6 532 aa14.7□□□□□ -0.06
SCAF1-203ENST00000598359 FAM3CQ92520 227 aa14.7□□□□□ -0.06
SCAF1-203ENST00000598359 E2F7Q96AV8 911 aa14.7□□□□□ -0.06
SCAF1-203ENST00000598359 CLDN23Q96B33 292 aa14.7□□□□□ -0.06
SCAF1-203ENST00000598359 PCED1BQ96HM7 432 aa14.7□□□□□ -0.06
SCAF1-203ENST00000598359 OSBPL6Q9BZF3 934 aa14.7□□□□□ -0.06
SCAF1-203ENST00000598359 SMYD3Q9H7B4 428 aa14.7□□□□□ -0.06
SCAF1-203ENST00000598359 TRPV5Q9NQA5 729 aa14.7□□□□□ -0.06
SCAF1-203ENST00000598359 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.7□□□□□ -0.06
SCAF1-203ENST00000598359 MAGEC2Q9UBF1 373 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms