RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 TRMT2BQ96GJ1 504 aaKnown RBP17.8■□□□□ 0.44
USHBP1-208ENST00000598309 MYRFLQ96LU7 910 aa17.8■□□□□ 0.44
USHBP1-208ENST00000598309 TASP1Q9H6P5 420 aa17.8■□□□□ 0.44
USHBP1-208ENST00000598309 TBC1D17Q9HA65 648 aa17.8■□□□□ 0.44
USHBP1-208ENST00000598309 MAGEC2Q9UBF1 373 aaPredicted RBP17.8■□□□□ 0.44
USHBP1-208ENST00000598309 UXTQ9UBK9 157 aaPredicted RBP17.8■□□□□ 0.44
USHBP1-208ENST00000598309 NME7Q9Y5B8 376 aa17.8■□□□□ 0.44
USHBP1-208ENST00000598309 SOBPA7XYQ1 873 aa17.79■□□□□ 0.44
USHBP1-208ENST00000598309 CETN3O15182 167 aa17.79■□□□□ 0.44
USHBP1-208ENST00000598309 PDGFRBP09619 1106 aa17.79■□□□□ 0.44
USHBP1-208ENST00000598309 RFX1P22670 979 aa17.79■□□□□ 0.44
USHBP1-208ENST00000598309 DDX6P26196 483 aaKnown RBP eCLIP17.79■□□□□ 0.44
USHBP1-208ENST00000598309 ANP32AP39687 249 aaKnown RBP17.79■□□□□ 0.44
USHBP1-208ENST00000598309 GPR15P49685 360 aa17.79■□□□□ 0.44
USHBP1-208ENST00000598309 PTPN5P54829 565 aa17.79■□□□□ 0.44
USHBP1-208ENST00000598309 NLRP12P59046 1061 aa17.79■□□□□ 0.44
USHBP1-208ENST00000598309 STARD6P59095 220 aa17.79■□□□□ 0.44
USHBP1-208ENST00000598309 MLF2Q15773 248 aaPredicted RBP17.79■□□□□ 0.44
USHBP1-208ENST00000598309 STXBP5Q5T5C0 1151 aa17.79■□□□□ 0.44
USHBP1-208ENST00000598309 GPR158Q5T848 1215 aa17.79■□□□□ 0.44
USHBP1-208ENST00000598309 VITQ6UXI7 678 aa17.79■□□□□ 0.44
USHBP1-208ENST00000598309 PCED1BQ96HM7 432 aa17.79■□□□□ 0.44
USHBP1-208ENST00000598309 TSG101Q99816 390 aa17.79■□□□□ 0.44
USHBP1-208ENST00000598309 TRMT61BQ9BVS5 477 aaKnown RBP17.79■□□□□ 0.44
USHBP1-208ENST00000598309 SMYD3Q9H7B4 428 aa17.79■□□□□ 0.44
USHBP1-208ENST00000598309 TRPV5Q9NQA5 729 aa17.79■□□□□ 0.44
USHBP1-208ENST00000598309 OBP2AQ9NY56 170 aa17.79■□□□□ 0.44
USHBP1-208ENST00000598309 GALR2O43603 387 aaPredicted RBP17.78■□□□□ 0.44
USHBP1-208ENST00000598309 CLSTN1O94985 981 aa17.78■□□□□ 0.44
USHBP1-208ENST00000598309 ASS1P00966 412 aaKnown RBP17.78■□□□□ 0.44
USHBP1-208ENST00000598309 HLA-DRAP01903 254 aa17.78■□□□□ 0.44
USHBP1-208ENST00000598309 TRIM49P0CI25 452 aa17.78■□□□□ 0.44
USHBP1-208ENST00000598309 TRIM49CP0CI26 452 aa17.78■□□□□ 0.44
USHBP1-208ENST00000598309 EPB41P11171 864 aaKnown RBP17.78■□□□□ 0.44
USHBP1-208ENST00000598309 GTF2H1P32780 548 aa17.78■□□□□ 0.44
USHBP1-208ENST00000598309 PPP1R2P41236 205 aa17.78■□□□□ 0.44
USHBP1-208ENST00000598309 VIPR2P41587 438 aa17.78■□□□□ 0.44
USHBP1-208ENST00000598309 PIK3CAP42336 1068 aa17.78■□□□□ 0.44
USHBP1-208ENST00000598309 CYP27A1Q02318 531 aa17.78■□□□□ 0.44
USHBP1-208ENST00000598309 LRRC63Q05C16 580 aa17.78■□□□□ 0.44
USHBP1-208ENST00000598309 DDR2Q16832 855 aa17.78■□□□□ 0.44
USHBP1-208ENST00000598309 SLC44A4Q53GD3 710 aa17.78■□□□□ 0.44
USHBP1-208ENST00000598309 MDH1BQ5I0G3 518 aa17.78■□□□□ 0.44
USHBP1-208ENST00000598309 ARID3BQ8IVW6 561 aaPredicted RBP17.78■□□□□ 0.44
USHBP1-208ENST00000598309 MFSD6LQ8IWD5 586 aa17.78■□□□□ 0.44
USHBP1-208ENST00000598309 ZC3H3Q8IXZ2 948 aaKnown RBP17.78■□□□□ 0.44
USHBP1-208ENST00000598309 ADSSL1Q8N142 457 aa17.78■□□□□ 0.44
USHBP1-208ENST00000598309 IRF7Q92985 503 aa17.78■□□□□ 0.44
USHBP1-208ENST00000598309 SPATA17Q96L03 361 aa17.78■□□□□ 0.44
USHBP1-208ENST00000598309 DDX23Q9BUQ8 820 aaKnown RBP17.78■□□□□ 0.44
USHBP1-208ENST00000598309 IMPG2Q9BZV3 1241 aa17.78■□□□□ 0.44
USHBP1-208ENST00000598309 IRF2BPLQ9H1B7 796 aa17.78■□□□□ 0.44
USHBP1-208ENST00000598309 BRD9Q9H8M2 597 aa17.78■□□□□ 0.44
USHBP1-208ENST00000598309 SLC38A8A6NNN8 435 aa17.77■□□□□ 0.44
USHBP1-208ENST00000598309 HEPACAM2A8MVW5 462 aa17.77■□□□□ 0.44
USHBP1-208ENST00000598309 A8MXQ7 604 aa17.77■□□□□ 0.44
USHBP1-208ENST00000598309 TRIM66O15016 1216 aa17.77■□□□□ 0.44
USHBP1-208ENST00000598309 SLC16A3O15427 465 aaKnown RBP17.77■□□□□ 0.44
USHBP1-208ENST00000598309 GADD45BO75293 160 aaPredicted RBP17.77■□□□□ 0.44
USHBP1-208ENST00000598309 F11P03951 625 aa17.77■□□□□ 0.44
USHBP1-208ENST00000598309 PTPN1P18031 435 aaKnown RBP17.77■□□□□ 0.44
USHBP1-208ENST00000598309 CYP4F8P98187 520 aa17.77■□□□□ 0.44
USHBP1-208ENST00000598309 FKBP3Q00688 224 aaKnown RBP17.77■□□□□ 0.44
USHBP1-208ENST00000598309 PPP3CAQ08209 521 aa17.77■□□□□ 0.44
USHBP1-208ENST00000598309 FCHO2Q0JRZ9 810 aa17.77■□□□□ 0.44
USHBP1-208ENST00000598309 TCF15Q12870 199 aa17.77■□□□□ 0.44
USHBP1-208ENST00000598309 STIM1Q13586 685 aa17.77■□□□□ 0.44
USHBP1-208ENST00000598309 GRM2Q14416 872 aa17.77■□□□□ 0.44
USHBP1-208ENST00000598309 SDHAF4Q5VUM1 108 aa17.77■□□□□ 0.44
USHBP1-208ENST00000598309 TMEM150AQ86TG1 271 aa17.77■□□□□ 0.44
USHBP1-208ENST00000598309 SCN4BQ8IWT1 228 aa17.77■□□□□ 0.44
USHBP1-208ENST00000598309 B3GALNT2Q8NCR0 500 aa17.77■□□□□ 0.44
USHBP1-208ENST00000598309 ERCC4Q92889 916 aaPredicted RBP17.77■□□□□ 0.44
USHBP1-208ENST00000598309 ELOVL4Q9GZR5 314 aa17.77■□□□□ 0.44
USHBP1-208ENST00000598309 DPEP3Q9H4B8 488 aa17.77■□□□□ 0.44
USHBP1-208ENST00000598309 TMEM8AQ9HCN3 771 aa17.77■□□□□ 0.44
USHBP1-208ENST00000598309 MAN1B1Q9UKM7 699 aa17.77■□□□□ 0.44
USHBP1-208ENST00000598309 NCANO14594 1321 aa17.76■□□□□ 0.43
USHBP1-208ENST00000598309 STK25O00506 426 aa17.76■□□□□ 0.43
USHBP1-208ENST00000598309 PSMA7O14818 248 aa17.76■□□□□ 0.43
USHBP1-208ENST00000598309 STX10O60499 249 aa17.76■□□□□ 0.43
USHBP1-208ENST00000598309 BDNFP23560 247 aa17.76■□□□□ 0.43
USHBP1-208ENST00000598309 ANXA13P27216 316 aa17.76■□□□□ 0.43
USHBP1-208ENST00000598309 GDI1P31150 447 aa17.76■□□□□ 0.43
USHBP1-208ENST00000598309 ASPAP45381 313 aa17.76■□□□□ 0.43
USHBP1-208ENST00000598309 GCLMP48507 274 aa17.76■□□□□ 0.43
USHBP1-208ENST00000598309 UBE2HP62256 183 aa17.76■□□□□ 0.43
USHBP1-208ENST00000598309 NHLH1Q02575 133 aa17.76■□□□□ 0.43
USHBP1-208ENST00000598309 SCARA5Q6ZMJ2 495 aa17.76■□□□□ 0.43
USHBP1-208ENST00000598309 CCDC105Q8IYK2 499 aa17.76■□□□□ 0.43
USHBP1-208ENST00000598309 MRPS31Q92665 395 aaKnown RBP17.76■□□□□ 0.43
USHBP1-208ENST00000598309 RSPRY1Q96DX4 576 aa17.76■□□□□ 0.43
USHBP1-208ENST00000598309 DHTKD1Q96HY7 919 aaPredicted RBP17.76■□□□□ 0.43
USHBP1-208ENST00000598309 TNIP3Q96KP6 325 aa17.76■□□□□ 0.43
USHBP1-208ENST00000598309 C8orf48Q96LL4 319 aa17.76■□□□□ 0.43
USHBP1-208ENST00000598309 SDCBP2Q9H190 292 aa17.76■□□□□ 0.43
USHBP1-208ENST00000598309 EHD2Q9NZN4 543 aa17.76■□□□□ 0.43
USHBP1-208ENST00000598309 MAGED2Q9UNF1 606 aaPredicted RBP17.76■□□□□ 0.43
USHBP1-208ENST00000598309 KANSL1LA0AUZ9 987 aa17.75■□□□□ 0.43
USHBP1-208ENST00000598309 DPYSL4O14531 572 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms