RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 TRPC7Q9HCX4 862 aa17.27■□□□□ 0.36
LIM2-202ENST00000596399 ITGA11Q9UKX5 1188 aa17.27■□□□□ 0.36
LIM2-202ENST00000596399 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.26■□□□□ 0.35
LIM2-202ENST00000596399 NOL4O94818 638 aa17.26■□□□□ 0.35
LIM2-202ENST00000596399 LDHAP00338 332 aaKnown RBP17.26■□□□□ 0.35
LIM2-202ENST00000596399 CSH1P0DML2 217 aa17.26■□□□□ 0.35
LIM2-202ENST00000596399 CSH2P0DML3 217 aa17.26■□□□□ 0.35
LIM2-202ENST00000596399 LMO2P25791 158 aa17.26■□□□□ 0.35
LIM2-202ENST00000596399 HOXD13P35453 343 aa17.26■□□□□ 0.35
LIM2-202ENST00000596399 PSMC1P62191 440 aaKnown RBP17.26■□□□□ 0.35
LIM2-202ENST00000596399 RBP5P82980 135 aa17.26■□□□□ 0.35
LIM2-202ENST00000596399 MYL7Q01449 175 aa17.26■□□□□ 0.35
LIM2-202ENST00000596399 CEP68Q76N32 757 aa17.26■□□□□ 0.35
LIM2-202ENST00000596399 CBWD2Q8IUF1 395 aa17.26■□□□□ 0.35
LIM2-202ENST00000596399 SCN4BQ8IWT1 228 aa17.26■□□□□ 0.35
LIM2-202ENST00000596399 ADGRF2Q8IZF7 708 aa17.26■□□□□ 0.35
LIM2-202ENST00000596399 SYNPOQ8N3V7 929 aa17.26■□□□□ 0.35
LIM2-202ENST00000596399 LRRC52Q8N7C0 313 aa17.26■□□□□ 0.35
LIM2-202ENST00000596399 LEO1Q8WVC0 666 aaPredicted RBP17.26■□□□□ 0.35
LIM2-202ENST00000596399 MRPS31Q92665 395 aaKnown RBP17.26■□□□□ 0.35
LIM2-202ENST00000596399 GDAP2Q9NXN4 497 aa17.26■□□□□ 0.35
LIM2-202ENST00000596399 C2orf78A6NCI8 922 aa17.25■□□□□ 0.35
LIM2-202ENST00000596399 TRDMT1O14717 391 aaKnown RBP17.25■□□□□ 0.35
LIM2-202ENST00000596399 GABRDO14764 452 aa17.25■□□□□ 0.35
LIM2-202ENST00000596399 RNF40O75150 1001 aa17.25■□□□□ 0.35
LIM2-202ENST00000596399 TMEM191BP0C7N4 346 aa17.25■□□□□ 0.35
LIM2-202ENST00000596399 SDHBP21912 280 aa17.25■□□□□ 0.35
LIM2-202ENST00000596399 GALK1P51570 392 aa17.25■□□□□ 0.35
LIM2-202ENST00000596399 PRR23CQ6ZRP0 262 aa17.25■□□□□ 0.35
LIM2-202ENST00000596399 WDR5BQ86VZ2 330 aa17.25■□□□□ 0.35
LIM2-202ENST00000596399 SPATA2LQ8IUW3 424 aaPredicted RBP17.25■□□□□ 0.35
LIM2-202ENST00000596399 TMEM86AQ8N2M4 240 aa17.25■□□□□ 0.35
LIM2-202ENST00000596399 GPD1LQ8N335 351 aa17.25■□□□□ 0.35
LIM2-202ENST00000596399 KBTBD7Q8WVZ9 684 aa17.25■□□□□ 0.35
LIM2-202ENST00000596399 CNTNAP3BQ96NU0 1288 aa17.25■□□□□ 0.35
LIM2-202ENST00000596399 CNTNAP3Q9BZ76 1288 aa17.25■□□□□ 0.35
LIM2-202ENST00000596399 INTS13Q9NVM9 706 aa17.25■□□□□ 0.35
LIM2-202ENST00000596399 WNT6Q9Y6F9 365 aa17.25■□□□□ 0.35
LIM2-202ENST00000596399 ATG2BQ96BY7 2078 aa17.25■□□□□ 0.35
LIM2-202ENST00000596399 ZNF638Q14966 1978 aaKnown RBP17.24■□□□□ 0.35
LIM2-202ENST00000596399 ANTXRLA6NF34 631 aa17.24■□□□□ 0.35
LIM2-202ENST00000596399 AXIN1O15169 862 aa17.24■□□□□ 0.35
LIM2-202ENST00000596399 PDGFRBP09619 1106 aa17.24■□□□□ 0.35
LIM2-202ENST00000596399 DDX6P26196 483 aaKnown RBP eCLIP17.24■□□□□ 0.35
LIM2-202ENST00000596399 CNR2P34972 360 aa17.24■□□□□ 0.35
LIM2-202ENST00000596399 GJA4P35212 333 aa17.24■□□□□ 0.35
LIM2-202ENST00000596399 RPL10AP62906 217 aaKnown RBP17.24■□□□□ 0.35
LIM2-202ENST00000596399 GRSF1Q12849 480 aaKnown RBP eCLIP17.24■□□□□ 0.35
LIM2-202ENST00000596399 CSRP2Q16527 193 aa17.24■□□□□ 0.35
LIM2-202ENST00000596399 CC2D1AQ6P1N0 951 aaPredicted RBP17.24■□□□□ 0.35
LIM2-202ENST00000596399 TOP6BLQ8N6T0 577 aa17.24■□□□□ 0.35
LIM2-202ENST00000596399 ARL14EPQ8N8R7 260 aaPredicted RBP17.24■□□□□ 0.35
LIM2-202ENST00000596399 EZH1Q92800 747 aaPredicted RBP17.24■□□□□ 0.35
LIM2-202ENST00000596399 HPDLQ96IR7 371 aa17.24■□□□□ 0.35
LIM2-202ENST00000596399 RTKNQ9BST9 563 aa17.24■□□□□ 0.35
LIM2-202ENST00000596399 LINC00597Q9H2U6 94 aa17.24■□□□□ 0.35
LIM2-202ENST00000596399 ABCB6Q9NP58 842 aa17.24■□□□□ 0.35
LIM2-202ENST00000596399 CRTAC1Q9NQ79 661 aa17.24■□□□□ 0.35
LIM2-202ENST00000596399 TFIP11Q9UBB9 837 aaKnown RBP17.24■□□□□ 0.35
LIM2-202ENST00000596399 HOXA6P31267 233 aa17.23■□□□□ 0.35
LIM2-202ENST00000596399 LHX1P48742 406 aa17.23■□□□□ 0.35
LIM2-202ENST00000596399 NASPP49321 788 aaPredicted RBP17.23■□□□□ 0.35
LIM2-202ENST00000596399 USP46P62068 366 aa17.23■□□□□ 0.35
LIM2-202ENST00000596399 ZXDBP98169 803 aa17.23■□□□□ 0.35
LIM2-202ENST00000596399 ALCAMQ13740 583 aa17.23■□□□□ 0.35
LIM2-202ENST00000596399 MTF1Q14872 753 aa17.23■□□□□ 0.35
LIM2-202ENST00000596399 SF3A2Q15428 464 aaKnown RBP17.23■□□□□ 0.35
LIM2-202ENST00000596399 ZNF77Q15935 545 aa17.23■□□□□ 0.35
LIM2-202ENST00000596399 E2F4Q16254 413 aa17.23■□□□□ 0.35
LIM2-202ENST00000596399 CFAP221Q4G0U5 840 aa17.23■□□□□ 0.35
LIM2-202ENST00000596399 FAM171BQ6P995 826 aa17.23■□□□□ 0.35
LIM2-202ENST00000596399 LIMS2Q7Z4I7 341 aa17.23■□□□□ 0.35
LIM2-202ENST00000596399 KBTBD6Q86V97 674 aa17.23■□□□□ 0.35
LIM2-202ENST00000596399 RDH13Q8NBN7 331 aa17.23■□□□□ 0.35
LIM2-202ENST00000596399 TRMT2BQ96GJ1 504 aaKnown RBP17.23■□□□□ 0.35
LIM2-202ENST00000596399 ANKRD36BP1Q96IX9 119 aa17.23■□□□□ 0.35
LIM2-202ENST00000596399 MYRFLQ96LU7 910 aa17.23■□□□□ 0.35
LIM2-202ENST00000596399 SYT15Q9BQS2 421 aa17.23■□□□□ 0.35
LIM2-202ENST00000596399 ARRDC1-AS1Q9H2J1 176 aa17.23■□□□□ 0.35
LIM2-202ENST00000596399 TMEM206Q9H813 350 aa17.23■□□□□ 0.35
LIM2-202ENST00000596399 ECT2Q9H8V3 914 aa17.23■□□□□ 0.35
LIM2-202ENST00000596399 KIF9Q9HAQ2 790 aa17.23■□□□□ 0.35
LIM2-202ENST00000596399 RXFP3Q9NSD7 469 aa17.23■□□□□ 0.35
LIM2-202ENST00000596399 DUS2Q9NX74 493 aaKnown RBP17.23■□□□□ 0.35
LIM2-202ENST00000596399 HSPBP1Q9NZL4 362 aa17.23■□□□□ 0.35
LIM2-202ENST00000596399 ZMYM5Q9UJ78 669 aa17.23■□□□□ 0.35
LIM2-202ENST00000596399 NME7Q9Y5B8 376 aa17.23■□□□□ 0.35
LIM2-202ENST00000596399 LRP3O75074 770 aa17.22■□□□□ 0.35
LIM2-202ENST00000596399 CKMP06732 381 aa17.22■□□□□ 0.35
LIM2-202ENST00000596399 BDNFP23560 247 aa17.22■□□□□ 0.35
LIM2-202ENST00000596399 CASP1P29466 404 aa17.22■□□□□ 0.35
LIM2-202ENST00000596399 FAM160A1Q05DH4 1040 aa17.22■□□□□ 0.35
LIM2-202ENST00000596399 ZNF268Q14587 947 aaPredicted RBP17.22■□□□□ 0.35
LIM2-202ENST00000596399 STK38Q15208 465 aa17.22■□□□□ 0.35
LIM2-202ENST00000596399 FOXD4L5Q5VV16 416 aaPredicted RBP17.22■□□□□ 0.35
LIM2-202ENST00000596399 CCDC65Q8IXS2 484 aa17.22■□□□□ 0.35
LIM2-202ENST00000596399 LINC00301Q8NCQ3 95 aa17.22■□□□□ 0.35
LIM2-202ENST00000596399 NETO1Q8TDF5 533 aa17.22■□□□□ 0.35
LIM2-202ENST00000596399 OSCP1Q8WVF1 389 aa17.22■□□□□ 0.35
LIM2-202ENST00000596399 FOXD4L4Q8WXT5 416 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms