RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 TRMT2BQ96GJ1 504 aaKnown RBP13.95□□□□□ -0.18
USE1-207ENST00000596136 SNX25Q9H3E2 840 aa13.95□□□□□ -0.18
USE1-207ENST00000596136 ATXN3LQ9H3M9 355 aa13.95□□□□□ -0.18
USE1-207ENST00000596136 TASP1Q9H6P5 420 aa13.95□□□□□ -0.18
USE1-207ENST00000596136 OBP2AQ9NY56 170 aa13.95□□□□□ -0.18
USE1-207ENST00000596136 MAGEC2Q9UBF1 373 aaPredicted RBP13.95□□□□□ -0.18
USE1-207ENST00000596136 CA14Q9ULX7 337 aa13.95□□□□□ -0.18
USE1-207ENST00000596136 NUP210Q8TEM1 1887 aaPredicted RBP13.95□□□□□ -0.18
USE1-207ENST00000596136 NCANO14594 1321 aa13.94□□□□□ -0.18
USE1-207ENST00000596136 GALR2O43603 387 aaPredicted RBP13.94□□□□□ -0.18
USE1-207ENST00000596136 PI15O43692 258 aa13.94□□□□□ -0.18
USE1-207ENST00000596136 OBSL1O75147 1896 aa13.94□□□□□ -0.18
USE1-207ENST00000596136 GADD45BO75293 160 aaPredicted RBP13.94□□□□□ -0.18
USE1-207ENST00000596136 ASS1P00966 412 aaKnown RBP13.94□□□□□ -0.18
USE1-207ENST00000596136 PDGFRBP09619 1106 aa13.94□□□□□ -0.18
USE1-207ENST00000596136 VIPR2P41587 438 aa13.94□□□□□ -0.18
USE1-207ENST00000596136 GPR15P49685 360 aa13.94□□□□□ -0.18
USE1-207ENST00000596136 NLRP12P59046 1061 aa13.94□□□□□ -0.18
USE1-207ENST00000596136 PSMC1P62191 440 aaKnown RBP13.94□□□□□ -0.18
USE1-207ENST00000596136 FCHO2Q0JRZ9 810 aa13.94□□□□□ -0.18
USE1-207ENST00000596136 DDR2Q16832 855 aa13.94□□□□□ -0.18
USE1-207ENST00000596136 ZNF699Q32M78 642 aa13.94□□□□□ -0.18
USE1-207ENST00000596136 ZNF667Q5HYK9 610 aa13.94□□□□□ -0.18
USE1-207ENST00000596136 STXBP5Q5T5C0 1151 aa13.94□□□□□ -0.18
USE1-207ENST00000596136 ARID3BQ8IVW6 561 aaPredicted RBP13.94□□□□□ -0.18
USE1-207ENST00000596136 FAM186BQ8IYM0 893 aa13.94□□□□□ -0.18
USE1-207ENST00000596136 ADSSL1Q8N142 457 aa13.94□□□□□ -0.18
USE1-207ENST00000596136 SMARCE1Q969G3 411 aa13.94□□□□□ -0.18
USE1-207ENST00000596136 MYLPFQ96A32 169 aa13.94□□□□□ -0.18
USE1-207ENST00000596136 RSPRY1Q96DX4 576 aa13.94□□□□□ -0.18
USE1-207ENST00000596136 SHDQ96IW2 340 aa13.94□□□□□ -0.18
USE1-207ENST00000596136 SPATA17Q96L03 361 aa13.94□□□□□ -0.18
USE1-207ENST00000596136 TRMT61BQ9BVS5 477 aaKnown RBP13.94□□□□□ -0.18
USE1-207ENST00000596136 TBC1D17Q9HA65 648 aa13.94□□□□□ -0.18
USE1-207ENST00000596136 CHMP5Q9NZZ3 219 aa13.94□□□□□ -0.18
USE1-207ENST00000596136 NXF1Q9UBU9 619 aaKnown RBP13.94□□□□□ -0.18
USE1-207ENST00000596136 SHISA7A6NL88 538 aa13.93□□□□□ -0.18
USE1-207ENST00000596136 HEPACAM2A8MVW5 462 aa13.93□□□□□ -0.18
USE1-207ENST00000596136 ARNTLO00327 626 aa13.93□□□□□ -0.18
USE1-207ENST00000596136 KRT13P13646 458 aa13.93□□□□□ -0.18
USE1-207ENST00000596136 PTPN1P18031 435 aaKnown RBP13.93□□□□□ -0.18
USE1-207ENST00000596136 DDX6P26196 483 aaKnown RBP eCLIP13.93□□□□□ -0.18
USE1-207ENST00000596136 GTF2H1P32780 548 aa13.93□□□□□ -0.18
USE1-207ENST00000596136 PTPN5P54829 565 aa13.93□□□□□ -0.18
USE1-207ENST00000596136 NHLH1Q02575 133 aa13.93□□□□□ -0.18
USE1-207ENST00000596136 PPP3CAQ08209 521 aa13.93□□□□□ -0.18
USE1-207ENST00000596136 MLF2Q15773 248 aaPredicted RBP13.93□□□□□ -0.18
USE1-207ENST00000596136 TAF12Q16514 161 aa13.93□□□□□ -0.18
USE1-207ENST00000596136 ARHGAP15Q53QZ3 475 aa13.93□□□□□ -0.18
USE1-207ENST00000596136 GPR158Q5T848 1215 aa13.93□□□□□ -0.18
USE1-207ENST00000596136 OR6B3Q8NGW1 331 aa13.93□□□□□ -0.18
USE1-207ENST00000596136 ERCC4Q92889 916 aaPredicted RBP13.93□□□□□ -0.18
USE1-207ENST00000596136 IRF7Q92985 503 aa13.93□□□□□ -0.18
USE1-207ENST00000596136 PCED1BQ96HM7 432 aa13.93□□□□□ -0.18
USE1-207ENST00000596136 SLC46A2Q9BY10 475 aa13.93□□□□□ -0.18
USE1-207ENST00000596136 OSBPL6Q9BZF3 934 aa13.93□□□□□ -0.18
USE1-207ENST00000596136 SLITRK6Q9H5Y7 841 aa13.93□□□□□ -0.18
USE1-207ENST00000596136 DLGAP2Q9P1A6 1054 aa13.93□□□□□ -0.18
USE1-207ENST00000596136 UXTQ9UBK9 157 aaPredicted RBP13.93□□□□□ -0.18
USE1-207ENST00000596136 COL4A2P08572 1712 aa13.93□□□□□ -0.18
USE1-207ENST00000596136 ANAPC1Q9H1A4 1944 aa13.92□□□□□ -0.18
USE1-207ENST00000596136 KANSL1LA0AUZ9 987 aa13.92□□□□□ -0.18
USE1-207ENST00000596136 SLC38A8A6NNN8 435 aa13.92□□□□□ -0.18
USE1-207ENST00000596136 A8MXQ7 604 aa13.92□□□□□ -0.18
USE1-207ENST00000596136 CETN3O15182 167 aa13.92□□□□□ -0.18
USE1-207ENST00000596136 KINO60870 393 aaKnown RBP13.92□□□□□ -0.18
USE1-207ENST00000596136 HLA-DRAP01903 254 aa13.92□□□□□ -0.18
USE1-207ENST00000596136 TRIM49P0CI25 452 aa13.92□□□□□ -0.18
USE1-207ENST00000596136 TRIM49CP0CI26 452 aa13.92□□□□□ -0.18
USE1-207ENST00000596136 P4HA1P13674 534 aa13.92□□□□□ -0.18
USE1-207ENST00000596136 BDNFP23560 247 aa13.92□□□□□ -0.18
USE1-207ENST00000596136 MLLT6P55198 1093 aaPredicted RBP13.92□□□□□ -0.18
USE1-207ENST00000596136 CDH8P55286 799 aa13.92□□□□□ -0.18
USE1-207ENST00000596136 CYP4F8P98187 520 aa13.92□□□□□ -0.18
USE1-207ENST00000596136 LRRC63Q05C16 580 aa13.92□□□□□ -0.18
USE1-207ENST00000596136 GRM2Q14416 872 aa13.92□□□□□ -0.18
USE1-207ENST00000596136 SDHAF4Q5VUM1 108 aa13.92□□□□□ -0.18
USE1-207ENST00000596136 ANKRD40Q6AI12 368 aa13.92□□□□□ -0.18
USE1-207ENST00000596136 FOXR2Q6PJQ5 311 aa13.92□□□□□ -0.18
USE1-207ENST00000596136 MON1AQ86VX9 555 aa13.92□□□□□ -0.18
USE1-207ENST00000596136 CCDC105Q8IYK2 499 aa13.92□□□□□ -0.18
USE1-207ENST00000596136 B3GALNT2Q8NCR0 500 aa13.92□□□□□ -0.18
USE1-207ENST00000596136 C8orf48Q96LL4 319 aa13.92□□□□□ -0.18
USE1-207ENST00000596136 LRRC3BQ96PB8 259 aa13.92□□□□□ -0.18
USE1-207ENST00000596136 GCNAQ96QF7 691 aa13.92□□□□□ -0.18
USE1-207ENST00000596136 SDCBP2Q9H190 292 aa13.92□□□□□ -0.18
USE1-207ENST00000596136 IRF2BPLQ9H1B7 796 aa13.92□□□□□ -0.18
USE1-207ENST00000596136 DPEP3Q9H4B8 488 aa13.92□□□□□ -0.18
USE1-207ENST00000596136 SMYD3Q9H7B4 428 aa13.92□□□□□ -0.18
USE1-207ENST00000596136 TMEM8AQ9HCN3 771 aa13.92□□□□□ -0.18
USE1-207ENST00000596136 SIT1Q9Y3P8 196 aa13.92□□□□□ -0.18
USE1-207ENST00000596136 ZNF638Q14966 1978 aaKnown RBP13.91□□□□□ -0.18
USE1-207ENST00000596136 CHADO15335 359 aa13.91□□□□□ -0.18
USE1-207ENST00000596136 SLC16A3O15427 465 aaKnown RBP13.91□□□□□ -0.18
USE1-207ENST00000596136 TADA3O75528 432 aa13.91□□□□□ -0.18
USE1-207ENST00000596136 GLULP15104 373 aa13.91□□□□□ -0.18
USE1-207ENST00000596136 BMP6P22004 513 aa13.91□□□□□ -0.18
USE1-207ENST00000596136 CCNE1P24864 410 aa13.91□□□□□ -0.18
USE1-207ENST00000596136 PPP1R2P41236 205 aa13.91□□□□□ -0.18
USE1-207ENST00000596136 ASPAP45381 313 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms