RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 LRRC57Q8N9N7 239 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 BEGAINQ9BUH8 593 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 KIAA1586Q9HCI6 787 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 GPAMQ9HCL2 828 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 RGPD8O14715 1765 aaPredicted RBP12.83□□□□□ -0.36
LIG1-207ENST00000594759 ARHGEF35A5YM69 484 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 FBP2O00757 339 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 RNASEH1O60930 286 aaKnown RBP12.83□□□□□ -0.36
LIG1-207ENST00000594759 GPC4O75487 556 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 BCL10O95999 233 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 PEX2P28328 305 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 CDK8P49336 464 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 TRAF2Q12933 501 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 ODR4Q5SWX8 454 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 BSPRYQ5W0U4 402 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 RSPH3Q86UC2 560 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 ZNF280CQ8ND82 737 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 DEPTORQ8TB45 409 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 VPS11Q9H270 941 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 ADAM7Q9H2U9 754 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 NOL6Q9H6R4 1146 aaKnown RBP12.83□□□□□ -0.36
LIG1-207ENST00000594759 MRPL47Q9HD33 250 aaKnown RBP12.83□□□□□ -0.36
LIG1-207ENST00000594759 UVRAGQ9P2Y5 699 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 DDX39AO00148 427 aaKnown RBP12.83□□□□□ -0.36
LIG1-207ENST00000594759 MGEA5O60502 916 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 ZBTB11O95625 1053 aaPredicted RBP12.83□□□□□ -0.36
LIG1-207ENST00000594759 EIF2S1P05198 315 aaKnown RBP12.83□□□□□ -0.36
LIG1-207ENST00000594759 HSPA8P11142 646 aaKnown RBP12.83□□□□□ -0.36
LIG1-207ENST00000594759 ZNF12P17014 697 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 GM2AP17900 193 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 WDR4P57081 412 aaKnown RBP12.83□□□□□ -0.36
LIG1-207ENST00000594759 SF3B3Q15393 1217 aaKnown RBP12.83□□□□□ -0.36
LIG1-207ENST00000594759 POTEGQ6S5H5 508 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 ZDHHC24Q6UX98 284 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 TAS2R42Q7RTR8 314 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 EXOC8Q8IYI6 725 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 PAF1Q8N7H5 531 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 ALG3Q92685 438 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 NSUN4Q96CB9 384 aaKnown RBP12.83□□□□□ -0.36
LIG1-207ENST00000594759 NT5C1BQ96P26 610 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 IMPG2Q9BZV3 1241 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 NMUR2Q9GZQ4 415 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 PKD2L2Q9NZM6 624 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 DCCP43146 1447 aa12.83□□□□□ -0.36
LIG1-207ENST00000594759 CHD2O14647 1828 aaKnown RBP12.82□□□□□ -0.36
LIG1-207ENST00000594759 ATP9BO43861 1147 aa12.82□□□□□ -0.36
LIG1-207ENST00000594759 SLC5A3P53794 718 aa12.82□□□□□ -0.36
LIG1-207ENST00000594759 PRR5LQ6MZQ0 368 aa12.82□□□□□ -0.36
LIG1-207ENST00000594759 LRRC55Q6ZSA7 311 aa12.82□□□□□ -0.36
LIG1-207ENST00000594759 RHOT1Q8IXI2 618 aa12.82□□□□□ -0.36
LIG1-207ENST00000594759 SPIRE2Q8WWL2 714 aa12.82□□□□□ -0.36
LIG1-207ENST00000594759 SLC5A5Q92911 643 aa12.82□□□□□ -0.36
LIG1-207ENST00000594759 DNAJC18Q9H819 358 aa12.82□□□□□ -0.36
LIG1-207ENST00000594759 SMIM22K7EJ46 135 aa12.82□□□□□ -0.36
LIG1-207ENST00000594759 PDXKO00764 312 aa12.82□□□□□ -0.36
LIG1-207ENST00000594759 C10orf82Q8WW14 230 aa12.82□□□□□ -0.36
LIG1-207ENST00000594759 WRNIP1Q96S55 665 aa12.82□□□□□ -0.36
LIG1-207ENST00000594759 COPS7BQ9H9Q2 264 aaPredicted RBP12.82□□□□□ -0.36
LIG1-207ENST00000594759 PARVGQ9HBI0 331 aa12.82□□□□□ -0.36
LIG1-207ENST00000594759 LRRC4BQ9NT99 713 aa12.82□□□□□ -0.36
LIG1-207ENST00000594759 APEX2Q9UBZ4 518 aa12.82□□□□□ -0.36
LIG1-207ENST00000594759 NRXN3Q9Y4C0 1643 aa12.82□□□□□ -0.36
LIG1-207ENST00000594759 CD97P48960 835 aa12.82□□□□□ -0.36
LIG1-207ENST00000594759 MXI1P50539 228 aa12.82□□□□□ -0.36
LIG1-207ENST00000594759 SLC1A5Q15758 541 aa12.82□□□□□ -0.36
LIG1-207ENST00000594759 CCDC14Q49A88 953 aa12.82□□□□□ -0.36
LIG1-207ENST00000594759 PERM1Q5SV97 790 aa12.82□□□□□ -0.36
LIG1-207ENST00000594759 ARHGEF26Q96DR7 871 aa12.82□□□□□ -0.36
LIG1-207ENST00000594759 NUDT12Q9BQG2 462 aa12.82□□□□□ -0.36
LIG1-207ENST00000594759 GRHL1Q9NZI5 618 aa12.82□□□□□ -0.36
LIG1-207ENST00000594759 NKRFO15226 690 aaKnown RBP eCLIP12.81□□□□□ -0.36
LIG1-207ENST00000594759 TSPAN9O75954 239 aa12.81□□□□□ -0.36
LIG1-207ENST00000594759 RALAP11233 206 aa12.81□□□□□ -0.36
LIG1-207ENST00000594759 CD58P19256 250 aa12.81□□□□□ -0.36
LIG1-207ENST00000594759 NUDT2P50583 147 aa12.81□□□□□ -0.36
LIG1-207ENST00000594759 SNAP25P60880 206 aa12.81□□□□□ -0.36
LIG1-207ENST00000594759 PLOD1Q02809 727 aaPredicted RBP12.81□□□□□ -0.36
LIG1-207ENST00000594759 DLG1Q12959 904 aa12.81□□□□□ -0.36
LIG1-207ENST00000594759 RAPH1Q70E73 1250 aa12.81□□□□□ -0.36
LIG1-207ENST00000594759 FASTKD5Q7L8L6 764 aaKnown RBP12.81□□□□□ -0.36
LIG1-207ENST00000594759 AMIGO2Q86SJ2 522 aa12.81□□□□□ -0.36
LIG1-207ENST00000594759 PAFAH2Q99487 392 aa12.81□□□□□ -0.36
LIG1-207ENST00000594759 OSBPL10Q9BXB5 764 aa12.81□□□□□ -0.36
LIG1-207ENST00000594759 ZMYM2Q9UBW7 1377 aa12.81□□□□□ -0.36
LIG1-207ENST00000594759 TTLL13PA6NNM8 815 aa12.81□□□□□ -0.36
LIG1-207ENST00000594759 H3BSA7 217 aa12.81□□□□□ -0.36
LIG1-207ENST00000594759 H7C0C1 242 aa12.81□□□□□ -0.36
LIG1-207ENST00000594759 CYP26A1O43174 497 aa12.81□□□□□ -0.36
LIG1-207ENST00000594759 ATP5OP48047 213 aa12.81□□□□□ -0.36
LIG1-207ENST00000594759 RPS6P62753 249 aaKnown RBP12.81□□□□□ -0.36
LIG1-207ENST00000594759 C16orf89Q6UX73 402 aa12.81□□□□□ -0.36
LIG1-207ENST00000594759 IRF2BP2Q7Z5L9 587 aa12.81□□□□□ -0.36
LIG1-207ENST00000594759 ALYREFQ86V81 257 aaKnown RBP12.81□□□□□ -0.36
LIG1-207ENST00000594759 TREML1Q86YW5 311 aa12.81□□□□□ -0.36
LIG1-207ENST00000594759 CLEC10AQ8IUN9 316 aa12.81□□□□□ -0.36
LIG1-207ENST00000594759 PEX5LQ8IYB4 626 aa12.81□□□□□ -0.36
LIG1-207ENST00000594759 SLC30A5Q8TAD4 765 aa12.81□□□□□ -0.36
LIG1-207ENST00000594759 AGR3Q8TD06 166 aa12.81□□□□□ -0.36
LIG1-207ENST00000594759 CDKL2Q92772 493 aa12.81□□□□□ -0.36
LIG1-207ENST00000594759 OMA1Q96E52 524 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms