RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 PEX11AO75192 247 aa16.22■□□□□ 0.19
PNKP-204ENST00000594661 CALCAP01258 141 aa16.22■□□□□ 0.19
PNKP-204ENST00000594661 TPBGLP0DKB5 382 aa16.22■□□□□ 0.19
PNKP-204ENST00000594661 MAGEA10P43363 369 aaPredicted RBP16.22■□□□□ 0.19
PNKP-204ENST00000594661 RAD23BP54727 409 aa16.22■□□□□ 0.19
PNKP-204ENST00000594661 GRIK4Q16099 956 aa16.22■□□□□ 0.19
PNKP-204ENST00000594661 DGKDQ16760 1214 aa16.22■□□□□ 0.19
PNKP-204ENST00000594661 MARCH8Q5T0T0 291 aa16.22■□□□□ 0.19
PNKP-204ENST00000594661 DNAJC14Q6Y2X3 702 aaPredicted RBP16.22■□□□□ 0.19
PNKP-204ENST00000594661 RHOT2Q8IXI1 618 aa16.22■□□□□ 0.19
PNKP-204ENST00000594661 CFAP61Q8NHU2 1237 aa16.22■□□□□ 0.19
PNKP-204ENST00000594661 FDXACB1Q9BRP7 624 aaPredicted RBP16.22■□□□□ 0.19
PNKP-204ENST00000594661 NFKBIZQ9BYH8 718 aa16.22■□□□□ 0.19
PNKP-204ENST00000594661 IQCGQ9H095 443 aaKnown RBP16.22■□□□□ 0.19
PNKP-204ENST00000594661 APOBEC3GQ9HC16 384 aaKnown RBP16.22■□□□□ 0.19
PNKP-204ENST00000594661 PREBQ9HCU5 417 aa16.22■□□□□ 0.19
PNKP-204ENST00000594661 CPSF3Q9UKF6 684 aaKnown RBP16.22■□□□□ 0.19
PNKP-204ENST00000594661 SMAPO00193 183 aa16.21■□□□□ 0.19
PNKP-204ENST00000594661 DYNC1LI2O43237 492 aaPredicted RBP16.21■□□□□ 0.19
PNKP-204ENST00000594661 CYP11B1P15538 503 aa16.21■□□□□ 0.19
PNKP-204ENST00000594661 PHKA2P46019 1235 aa16.21■□□□□ 0.19
PNKP-204ENST00000594661 PDE6CP51160 858 aa16.21■□□□□ 0.19
PNKP-204ENST00000594661 FMO1Q01740 532 aa16.21■□□□□ 0.19
PNKP-204ENST00000594661 PARP6Q2NL67 630 aa16.21■□□□□ 0.19
PNKP-204ENST00000594661 ZNF568Q3ZCX4 644 aa16.21■□□□□ 0.19
PNKP-204ENST00000594661 WDR44Q5JSH3 913 aa16.21■□□□□ 0.19
PNKP-204ENST00000594661 DNAJC9Q8WXX5 260 aa16.21■□□□□ 0.19
PNKP-204ENST00000594661 LZICQ8WZA0 190 aa16.21■□□□□ 0.19
PNKP-204ENST00000594661 USP6NLQ92738 828 aa16.21■□□□□ 0.19
PNKP-204ENST00000594661 VCX3BQ9H321 246 aa16.21■□□□□ 0.19
PNKP-204ENST00000594661 VCX3AQ9NNX9 186 aa16.21■□□□□ 0.19
PNKP-204ENST00000594661 CTTNBP2NLQ9P2B4 639 aa16.21■□□□□ 0.19
PNKP-204ENST00000594661 SCOCQ9UIL1 159 aa16.21■□□□□ 0.19
PNKP-204ENST00000594661 GNEQ9Y223 722 aaKnown RBP16.21■□□□□ 0.19
PNKP-204ENST00000594661 PASKQ96RG2 1323 aa16.21■□□□□ 0.18
PNKP-204ENST00000594661 FAM155AB1AL88 458 aaPredicted RBP16.21■□□□□ 0.18
PNKP-204ENST00000594661 KRIT1O00522 736 aa16.21■□□□□ 0.18
PNKP-204ENST00000594661 GJB6O95452 261 aa16.21■□□□□ 0.18
PNKP-204ENST00000594661 HOXC6P09630 235 aa16.21■□□□□ 0.18
PNKP-204ENST00000594661 ZNF865P0CJ78 1059 aaPredicted RBP16.21■□□□□ 0.18
PNKP-204ENST00000594661 KRT5P13647 590 aa16.21■□□□□ 0.18
PNKP-204ENST00000594661 OSTNP61366 133 aa16.21■□□□□ 0.18
PNKP-204ENST00000594661 GPC5P78333 572 aa16.21■□□□□ 0.18
PNKP-204ENST00000594661 AMHR2Q16671 573 aa16.21■□□□□ 0.18
PNKP-204ENST00000594661 TMEM132AQ24JP5 1023 aa16.21■□□□□ 0.18
PNKP-204ENST00000594661 OLFML2BQ68BL8 750 aa16.21■□□□□ 0.18
PNKP-204ENST00000594661 ENOSF1Q7L5Y1 443 aa16.21■□□□□ 0.18
PNKP-204ENST00000594661 HOOK3Q86VS8 718 aa16.21■□□□□ 0.18
PNKP-204ENST00000594661 THNSL1Q8IYQ7 743 aa16.21■□□□□ 0.18
PNKP-204ENST00000594661 RASGEF1CQ8N431 466 aa16.21■□□□□ 0.18
PNKP-204ENST00000594661 SH3TC2Q8TF17 1288 aa16.21■□□□□ 0.18
PNKP-204ENST00000594661 PPP1R13LQ8WUF5 828 aa16.21■□□□□ 0.18
PNKP-204ENST00000594661 PTPRN2Q92932 1015 aa16.21■□□□□ 0.18
PNKP-204ENST00000594661 PGM2Q96G03 612 aa16.21■□□□□ 0.18
PNKP-204ENST00000594661 UMODL1Q5DID0 1318 aa16.2■□□□□ 0.18
PNKP-204ENST00000594661 SHBGP04278 402 aa16.2■□□□□ 0.18
PNKP-204ENST00000594661 DESP17661 470 aa16.2■□□□□ 0.18
PNKP-204ENST00000594661 CYP2B6P20813 491 aa16.2■□□□□ 0.18
PNKP-204ENST00000594661 WDR49Q8IV35 697 aa16.2■□□□□ 0.18
PNKP-204ENST00000594661 DDX1Q92499 740 aaKnown RBP16.2■□□□□ 0.18
PNKP-204ENST00000594661 MTMR12Q9C0I1 747 aa16.2■□□□□ 0.18
PNKP-204ENST00000594661 CDT1Q9H211 546 aa16.2■□□□□ 0.18
PNKP-204ENST00000594661 RXFP1Q9HBX9 757 aa16.2■□□□□ 0.18
PNKP-204ENST00000594661 PRMT7Q9NVM4 692 aaPredicted RBP16.2■□□□□ 0.18
PNKP-204ENST00000594661 TNFSF13BQ9Y275 285 aa16.2■□□□□ 0.18
PNKP-204ENST00000594661 DDX3YO15523 660 aaKnown RBP16.19■□□□□ 0.18
PNKP-204ENST00000594661 GZMAP12544 262 aa16.19■□□□□ 0.18
PNKP-204ENST00000594661 FLT3P36888 993 aa16.19■□□□□ 0.18
PNKP-204ENST00000594661 POU5F1BQ06416 359 aa16.19■□□□□ 0.18
PNKP-204ENST00000594661 GRM1Q13255 1194 aa16.19■□□□□ 0.18
PNKP-204ENST00000594661 NCOA4Q13772 614 aa16.19■□□□□ 0.18
PNKP-204ENST00000594661 IFNLR1Q8IU57 520 aaPredicted RBP16.19■□□□□ 0.18
PNKP-204ENST00000594661 TMEM192Q8IY95 271 aa16.19■□□□□ 0.18
PNKP-204ENST00000594661 ARHGAP18Q8N392 663 aa16.19■□□□□ 0.18
PNKP-204ENST00000594661 UTP4Q969X6 686 aaKnown RBP16.19■□□□□ 0.18
PNKP-204ENST00000594661 LRRC4CQ9HCJ2 640 aa16.19■□□□□ 0.18
PNKP-204ENST00000594661 NUB1Q9Y5A7 615 aa16.19■□□□□ 0.18
PNKP-204ENST00000594661 CENPFP49454 3210 aa16.19■□□□□ 0.18
PNKP-204ENST00000594661 MROH7Q68CQ1 1323 aa16.19■□□□□ 0.18
PNKP-204ENST00000594661 A6NJR5 290 aa16.19■□□□□ 0.18
PNKP-204ENST00000594661 CCDC188H7C350 402 aa16.19■□□□□ 0.18
PNKP-204ENST00000594661 SUN1O94901 812 aa16.19■□□□□ 0.18
PNKP-204ENST00000594661 GSTT1P30711 240 aa16.19■□□□□ 0.18
PNKP-204ENST00000594661 HADHBP55084 474 aaKnown RBP16.19■□□□□ 0.18
PNKP-204ENST00000594661 NOP14P78316 857 aaKnown RBP16.19■□□□□ 0.18
PNKP-204ENST00000594661 CDR2Q01850 454 aa16.19■□□□□ 0.18
PNKP-204ENST00000594661 CRHR2Q13324 411 aa16.19■□□□□ 0.18
PNKP-204ENST00000594661 CUL2Q13617 745 aa16.19■□□□□ 0.18
PNKP-204ENST00000594661 FAM187BQ17R55 369 aa16.19■□□□□ 0.18
PNKP-204ENST00000594661 TLK2Q86UE8 772 aa16.19■□□□□ 0.18
PNKP-204ENST00000594661 RBBP8NLQ8NC74 664 aaPredicted RBP16.19■□□□□ 0.18
PNKP-204ENST00000594661 ZIC5Q96T25 663 aa16.19■□□□□ 0.18
PNKP-204ENST00000594661 YIPF2Q9BWQ6 316 aa16.19■□□□□ 0.18
PNKP-204ENST00000594661 TXLNGYQ9BZA5 131 aa16.19■□□□□ 0.18
PNKP-204ENST00000594661 TRIM7Q9C029 511 aa16.19■□□□□ 0.18
PNKP-204ENST00000594661 DDX47Q9H0S4 455 aaKnown RBP16.19■□□□□ 0.18
PNKP-204ENST00000594661 RMI1Q9H9A7 625 aa16.19■□□□□ 0.18
PNKP-204ENST00000594661 INTS9Q9NV88 658 aaKnown RBP16.19■□□□□ 0.18
PNKP-204ENST00000594661 SETD4Q9NVD3 440 aa16.19■□□□□ 0.18
PNKP-204ENST00000594661 LRCH1Q9Y2L9 728 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms