RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 RNF113AO15541 343 aaKnown RBP3.39□□□□□ -1.87
VRK3-204ENST00000593912 CYP26A1O43174 497 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 NOBOXO60393 691 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 ZNF217O75362 1048 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 CENPBP07199 599 aaPredicted RBP3.39□□□□□ -1.87
VRK3-204ENST00000593912 FGRP09769 529 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 OR4Q2P0C623 313 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 PRR29P0C7W0 189 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 CDK4P11802 303 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 HOXB2P14652 356 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 ATP5JP18859 108 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 RBMS1P29558 406 aaKnown RBP3.39□□□□□ -1.87
VRK3-204ENST00000593912 NMT1P30419 496 aaKnown RBP3.39□□□□□ -1.87
VRK3-204ENST00000593912 CTSKP43235 329 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 QARSP47897 775 aaKnown RBP3.39□□□□□ -1.87
VRK3-204ENST00000593912 DUSP3P51452 185 aaPredicted RBP3.39□□□□□ -1.87
VRK3-204ENST00000593912 HAND2P61296 217 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 ELAVL2Q12926 359 aaKnown RBP3.39□□□□□ -1.87
VRK3-204ENST00000593912 BFSP1Q12934 665 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 TUSC3Q13454 348 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 MORC3Q14149 939 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 MTF1Q14872 753 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 PDGFRLQ15198 375 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 SHBQ15464 509 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 NAB2Q15742 525 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 UGCGQ16739 394 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 ARHGAP15Q53QZ3 475 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 VPS53Q5VIR6 699 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 CC2D1AQ6P1N0 951 aaPredicted RBP3.39□□□□□ -1.87
VRK3-204ENST00000593912 KIAA1324Q6UXG2 1013 aaKnown RBP3.39□□□□□ -1.87
VRK3-204ENST00000593912 ANKS3Q6ZW76 656 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 Q71RC1 249 aaPredicted RBP3.39□□□□□ -1.87
VRK3-204ENST00000593912 KANSL1Q7Z3B3 1105 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 HEATR4Q86WZ0 1026 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 MIB1Q86YT6 1006 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 EFCAB13Q8IY85 973 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 CMTM8Q8IZV2 173 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 SLC34A3Q8N130 599 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 CACTIN-AS1Q8N1I8 211 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 MAB21L3Q8N8X9 362 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 GALNT11Q8NCW6 608 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 C3orf58Q8NDZ4 430 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 C9orf43Q8TAL5 461 aaPredicted RBP3.39□□□□□ -1.87
VRK3-204ENST00000593912 RHPN1Q8TCX5 695 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 EXOC4Q96A65 974 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 CCDC97Q96F63 343 aaPredicted RBP3.39□□□□□ -1.87
VRK3-204ENST00000593912 PGBD1Q96JS3 809 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 YTHDC1Q96MU7 727 aaKnown RBP3.39□□□□□ -1.87
VRK3-204ENST00000593912 TTC14Q96N46 770 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 PGLYRP2Q96PD5 576 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 MTMR9Q96QG7 549 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 SGPP1Q9BX95 441 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 INO80BQ9C086 356 aaPredicted RBP3.39□□□□□ -1.87
VRK3-204ENST00000593912 OSBPL2Q9H1P3 480 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 ADNPQ9H2P0 1102 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 LINC00597Q9H2U6 94 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 TASP1Q9H6P5 420 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 KAT14Q9H8E8 782 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 IFT122Q9HBG6 1241 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 GOLGA2P5Q9HBQ8 144 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 AGO4Q9HCK5 861 aaKnown RBP3.39□□□□□ -1.87
VRK3-204ENST00000593912 PTPRHQ9HD43 1115 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 TM9SF3Q9HD45 589 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 DUS2Q9NX74 493 aaKnown RBP3.39□□□□□ -1.87
VRK3-204ENST00000593912 WSB2Q9NYS7 404 aaPredicted RBP3.39□□□□□ -1.87
VRK3-204ENST00000593912 GABBR1Q9UBS5 961 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 PARP2Q9UGN5 583 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 FBXL5Q9UKA1 691 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 HCN2Q9UL51 889 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 CEP131Q9UPN4 1083 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 GIT1Q9Y2X7 761 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 MAFBQ9Y5Q3 323 aaPredicted RBP3.39□□□□□ -1.87
VRK3-204ENST00000593912 RAD54BQ9Y620 910 aa3.39□□□□□ -1.87
VRK3-204ENST00000593912 MEGF8Q7Z7M0 2845 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 NOTCH1P46531 2555 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 CKAP5Q14008 2032 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 MXRA5Q9NR99 2828 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 K7EM74 188 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 IPO5O00410 1097 aaKnown RBP3.38□□□□□ -1.87
VRK3-204ENST00000593912 LAD1O00515 517 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 SCAMP3O14828 347 aaKnown RBP3.38□□□□□ -1.87
VRK3-204ENST00000593912 PAPSS1O43252 624 aaPredicted RBP3.38□□□□□ -1.87
VRK3-204ENST00000593912 CYTH3O43739 400 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 TRAK2O60296 914 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 PPP1R37O75864 691 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 B3GAT3O94766 335 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 TNFSF15O95150 251 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 KAT7O95251 611 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 NPTXRO95502 500 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 C4BPAP04003 597 aaKnown RBP3.38□□□□□ -1.87
VRK3-204ENST00000593912 OATP04181 439 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 ITGAVP06756 1048 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 CD99P14209 185 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 CPB1P15086 417 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 CKMT2P17540 419 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 ABCB4P21439 1286 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 CD6P30203 668 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 WEE1P30291 646 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 IFNAR2P48551 515 aa3.38□□□□□ -1.87
VRK3-204ENST00000593912 CLCNKBP51801 687 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms