RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 ZNF720Q7Z2F6 126 aa15.84■□□□□ 0.13
PNKP-202ENST00000593706 CACNA2D4Q7Z3S7 1137 aa15.84■□□□□ 0.13
PNKP-202ENST00000593706 TMEM150AQ86TG1 271 aa15.84■□□□□ 0.13
PNKP-202ENST00000593706 ABCA7Q8IZY2 2146 aa15.84■□□□□ 0.13
PNKP-202ENST00000593706 PDCL2Q8N4E4 241 aa15.84■□□□□ 0.13
PNKP-202ENST00000593706 EXOC4Q96A65 974 aa15.84■□□□□ 0.13
PNKP-202ENST00000593706 SAAL1Q96ER3 474 aa15.84■□□□□ 0.13
PNKP-202ENST00000593706 FAM83CQ9BQN1 747 aa15.84■□□□□ 0.13
PNKP-202ENST00000593706 ARRDC1-AS1Q9H2J1 176 aa15.84■□□□□ 0.13
PNKP-202ENST00000593706 TRPC7Q9HCX4 862 aa15.84■□□□□ 0.13
PNKP-202ENST00000593706 TMLHEQ9NVH6 421 aa15.84■□□□□ 0.13
PNKP-202ENST00000593706 DDX43Q9NXZ2 648 aaKnown RBP15.84■□□□□ 0.13
PNKP-202ENST00000593706 TBC1D7Q9P0N9 293 aa15.84■□□□□ 0.13
PNKP-202ENST00000593706 AGAP1Q9UPQ3 857 aa15.84■□□□□ 0.13
PNKP-202ENST00000593706 CHD6Q8TD26 2715 aa15.83■□□□□ 0.13
PNKP-202ENST00000593706 PPP1R37O75864 691 aa15.83■□□□□ 0.12
PNKP-202ENST00000593706 GCNT3O95395 438 aa15.83■□□□□ 0.12
PNKP-202ENST00000593706 CKMP06732 381 aa15.83■□□□□ 0.12
PNKP-202ENST00000593706 KRT19P08727 400 aa15.83■□□□□ 0.12
PNKP-202ENST00000593706 ARSAP15289 507 aa15.83■□□□□ 0.12
PNKP-202ENST00000593706 GAP43P17677 238 aa15.83■□□□□ 0.12
PNKP-202ENST00000593706 ACAT1P24752 427 aaKnown RBP15.83■□□□□ 0.12
PNKP-202ENST00000593706 ADSSP30520 456 aa15.83■□□□□ 0.12
PNKP-202ENST00000593706 RPL10AP62906 217 aaKnown RBP15.83■□□□□ 0.12
PNKP-202ENST00000593706 PDGFRLQ15198 375 aa15.83■□□□□ 0.12
PNKP-202ENST00000593706 SF3A2Q15428 464 aaKnown RBP15.83■□□□□ 0.12
PNKP-202ENST00000593706 BRSK2Q8IWQ3 736 aa15.83■□□□□ 0.12
PNKP-202ENST00000593706 SYCP3Q8IZU3 236 aa15.83■□□□□ 0.12
PNKP-202ENST00000593706 CPA6Q8N4T0 437 aa15.83■□□□□ 0.12
PNKP-202ENST00000593706 CACTINQ8WUQ7 758 aaKnown RBP15.83■□□□□ 0.12
PNKP-202ENST00000593706 LEO1Q8WVC0 666 aaPredicted RBP15.83■□□□□ 0.12
PNKP-202ENST00000593706 DDX1Q92499 740 aaKnown RBP15.83■□□□□ 0.12
PNKP-202ENST00000593706 ACCSQ96QU6 501 aa15.83■□□□□ 0.12
PNKP-202ENST00000593706 RBAKQ9NYW8 714 aaPredicted RBP15.83■□□□□ 0.12
PNKP-202ENST00000593706 L1RE1Q9UN81 338 aa15.83■□□□□ 0.12
PNKP-202ENST00000593706 PI4KAP42356 2102 aa15.82■□□□□ 0.12
PNKP-202ENST00000593706 CCDC163A0A0D9SF12 145 aa15.82■□□□□ 0.12
PNKP-202ENST00000593706 OTOL1A6NHN0 477 aaPredicted RBP15.82■□□□□ 0.12
PNKP-202ENST00000593706 MYMKA6NI61 221 aa15.82■□□□□ 0.12
PNKP-202ENST00000593706 TRDMT1O14717 391 aaKnown RBP15.82■□□□□ 0.12
PNKP-202ENST00000593706 PPP6R2O75170 966 aa15.82■□□□□ 0.12
PNKP-202ENST00000593706 EPN2O95208 641 aa15.82■□□□□ 0.12
PNKP-202ENST00000593706 YEATS4O95619 227 aa15.82■□□□□ 0.12
PNKP-202ENST00000593706 LDHAP00338 332 aaKnown RBP15.82■□□□□ 0.12
PNKP-202ENST00000593706 F13A1P00488 732 aa15.82■□□□□ 0.12
PNKP-202ENST00000593706 EGFP01133 1207 aa15.82■□□□□ 0.12
PNKP-202ENST00000593706 PDIA4P13667 645 aaKnown RBP15.82■□□□□ 0.12
PNKP-202ENST00000593706 DRD1P21728 446 aa15.82■□□□□ 0.12
PNKP-202ENST00000593706 CYP2F1P24903 491 aa15.82■□□□□ 0.12
PNKP-202ENST00000593706 KCNA1Q09470 495 aa15.82■□□□□ 0.12
PNKP-202ENST00000593706 MTF1Q14872 753 aa15.82■□□□□ 0.12
PNKP-202ENST00000593706 DDR2Q16832 855 aa15.82■□□□□ 0.12
PNKP-202ENST00000593706 INTS6LQ5JSJ4 861 aaKnown RBP15.82■□□□□ 0.12
PNKP-202ENST00000593706 L1TD1Q5T7N2 865 aaKnown RBP15.82■□□□□ 0.12
PNKP-202ENST00000593706 SV2BQ7L1I2 683 aa15.82■□□□□ 0.12
PNKP-202ENST00000593706 KBTBD6Q86V97 674 aa15.82■□□□□ 0.12
PNKP-202ENST00000593706 MON1AQ86VX9 555 aa15.82■□□□□ 0.12
PNKP-202ENST00000593706 TMEM86AQ8N2M4 240 aa15.82■□□□□ 0.12
PNKP-202ENST00000593706 C1orf127Q8N9H9 656 aa15.82■□□□□ 0.12
PNKP-202ENST00000593706 DNAJC19Q96DA6 116 aa15.82■□□□□ 0.12
PNKP-202ENST00000593706 LOXL4Q96JB6 756 aa15.82■□□□□ 0.12
PNKP-202ENST00000593706 HHIPQ96QV1 700 aa15.82■□□□□ 0.12
PNKP-202ENST00000593706 ACBD6Q9BR61 282 aa15.82■□□□□ 0.12
PNKP-202ENST00000593706 STRA6Q9BX79 667 aa15.82■□□□□ 0.12
PNKP-202ENST00000593706 ABCB6Q9NP58 842 aa15.82■□□□□ 0.12
PNKP-202ENST00000593706 ITGA11Q9UKX5 1188 aa15.82■□□□□ 0.12
PNKP-202ENST00000593706 R3HCC1Q9Y3T6 440 aaKnown RBP15.82■□□□□ 0.12
PNKP-202ENST00000593706 MYO18AQ92614 2054 aaKnown RBP15.82■□□□□ 0.12
PNKP-202ENST00000593706 WDFY3Q8IZQ1 3526 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 TRAV19A0A0A6YYK7 116 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 FRMD3A2A2Y4 597 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 SOBPA7XYQ1 873 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 SPTLC2O15270 562 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 TADA3O75528 432 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 KRT37O76014 449 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 USP17L7P0C7H9 530 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 TMEM191BP0C7N4 346 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 IDEP14735 1019 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 IFNAR2P48551 515 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 WNT7BP56706 349 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 ZNF268Q14587 947 aaPredicted RBP15.81■□□□□ 0.12
PNKP-202ENST00000593706 E2F4Q16254 413 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 RRAGBQ5VZM2 374 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 SPATA2LQ8IUW3 424 aaPredicted RBP15.81■□□□□ 0.12
PNKP-202ENST00000593706 ADGRF2Q8IZF7 708 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 ASPMQ8IZT6 3477 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 CAMKK1Q8N5S9 505 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 CSGALNACT2Q8N6G5 542 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 LRRC52Q8N7C0 313 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 ZSWIM2Q8NEG5 633 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 RPLP0P6Q8NHW5 317 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 RIN3Q8TB24 985 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 ATP2A3Q93084 1043 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 CHFRQ96EP1 664 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 TRMT2BQ96GJ1 504 aaKnown RBP15.81■□□□□ 0.12
PNKP-202ENST00000593706 CHAMP1Q96JM3 812 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 ZNF396Q96N95 335 aaPredicted RBP15.81■□□□□ 0.12
PNKP-202ENST00000593706 P2RY13Q9BPV8 354 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 MTMR12Q9C0I1 747 aa15.81■□□□□ 0.12
PNKP-202ENST00000593706 DUS2Q9NX74 493 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms