RNA–Protein interactions for RNA: ENST00000593099.5

LIG3-216, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 4,664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-216ENST00000593099 TNFSF9P41273 254 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 DR1Q01658 176 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 AP1B1Q10567 949 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 IRF5Q13568 498 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 MFSD4BQ5TF39 518 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 PALB2Q86YC2 1186 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 LRRC52Q8N7C0 313 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 TTC25Q96NG3 672 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 MUC3BQ9H195 1237 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 ADAMTS5Q9UNA0 930 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 GZMAP12544 262 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 YWHAQP27348 245 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 KPNA1P52294 538 aaPredicted RBP10.31□□□□□ -0.76
LIG3-216ENST00000593099 PLTPP55058 493 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 AMPD2Q01433 879 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 MKRN4PQ13434 485 aaPredicted RBP10.31□□□□□ -0.76
LIG3-216ENST00000593099 MAP7D1Q3KQU3 841 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 C12orf56Q8IXR9 622 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 BSNDQ8WZ55 320 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 SCLYQ96I15 445 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 WDCPQ9H6R7 721 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 XPNPEP1Q9NQW7 623 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 INTUQ9ULD6 942 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 RWDD3Q9Y3V2 267 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 A0A1W2PQ45 241 aaPredicted RBP10.31□□□□□ -0.76
LIG3-216ENST00000593099 A0A1W2PQY0 241 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 SLC12A8A0AV02 714 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 DHX15O43143 795 aaKnown RBP10.31□□□□□ -0.76
LIG3-216ENST00000593099 TSPAN1O60635 241 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 MMEP08473 750 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 POU5F1BQ06416 359 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 EFEMP1Q12805 493 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 MTF1Q14872 753 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 BBS9Q3SYG4 887 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 IL31Q6EBC2 164 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 TC2NQ8N9U0 490 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 ATXN3LQ9H3M9 355 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 ST6GALNAC4Q9H4F1 302 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 SAGE1Q9NXZ1 904 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 PPP3CAQ08209 521 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 PGBD3Q8N328 593 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 SLC2A14Q8TDB8 520 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 UCMAQ8WVF2 138 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 ZNF606Q8WXB4 792 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 ZBTB10Q96DT7 871 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 ASIC4Q96FT7 647 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 PTPN18Q99952 460 aa10.31□□□□□ -0.76
LIG3-216ENST00000593099 IFNAR2P48551 515 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 ROR1Q01973 937 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 ZBTB16Q05516 673 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 MCL1Q07820 350 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 PSMD5Q16401 504 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 ANO4Q32M45 955 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 PABPC1LQ4VXU2 614 aaKnown RBP10.3□□□□□ -0.76
LIG3-216ENST00000593099 NPAS4Q8IUM7 802 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 AFAP1L2Q8N4X5 818 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 PI4K2BG5E9Z4 385 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 I3L4J1 428 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 CXCL14O95715 111 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 PTPN1P18031 435 aaKnown RBP10.3□□□□□ -0.76
LIG3-216ENST00000593099 SAT1P21673 171 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 PMLP29590 882 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 CTNNA1P35221 906 aaKnown RBP10.3□□□□□ -0.76
LIG3-216ENST00000593099 ZNF131P52739 623 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 CDH18Q13634 790 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 BRD3Q15059 726 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 GDF6Q6KF10 455 aaPredicted RBP10.3□□□□□ -0.76
LIG3-216ENST00000593099 PDCD7Q8N8D1 485 aaKnown RBP10.3□□□□□ -0.76
LIG3-216ENST00000593099 RPRD1AQ96P16 312 aaPredicted RBP10.3□□□□□ -0.76
LIG3-216ENST00000593099 EPB41L5Q9HCM4 733 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 CDH9Q9ULB4 789 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 SMIM28A0A1B0GU29 152 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 NT5C1B-RDH14C9J2C7 533 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 M0R2N6 131 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 TRIM66O15016 1216 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 EOMESO95936 686 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 INHBAP08476 426 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 PDE1BQ01064 536 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 ZNF618Q5T7W0 954 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 HHATQ5VTY9 493 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 PID1Q7Z2X4 250 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 ATPAF2Q8N5M1 289 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 CCDC110Q8TBZ0 833 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 USP6NLQ92738 828 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 MAGEB5Q9BZ81 275 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 PDZD7Q9H5P4 517 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.3□□□□□ -0.76
LIG3-216ENST00000593099 F5H5T6 163 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 ACRP10323 421 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 BDNFP23560 247 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 EDNRBP24530 442 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 MBTD1Q05BQ5 628 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 ZNF177Q13360 481 aaPredicted RBP10.3□□□□□ -0.76
LIG3-216ENST00000593099 DNAJC21Q5F1R6 531 aaKnown RBP10.3□□□□□ -0.76
LIG3-216ENST00000593099 RABGAP1LQ5R372 815 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 TAPT1Q6NXT6 567 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 ATRIPQ8WXE1 791 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 PCDHB8Q9UN66 801 aa10.3□□□□□ -0.76
LIG3-216ENST00000593099 TGFB1I1O43294 461 aa10.29□□□□□ -0.76
LIG3-216ENST00000593099 ATMINO43313 823 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms