RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-240ENST00000592815 GKN1Q9NS71 199 aa17.24■□□□□ 0.35
CIRBP-240ENST00000592815 RBM12Q9NTZ6 932 aaKnown RBP17.24■□□□□ 0.35
CIRBP-240ENST00000592815 CFAP45Q9UL16 551 aa17.24■□□□□ 0.35
CIRBP-240ENST00000592815 GPR179Q6PRD1 2367 aa17.24■□□□□ 0.35
CIRBP-240ENST00000592815 PDGFRBP09619 1106 aa17.23■□□□□ 0.35
CIRBP-240ENST00000592815 TNNI1P19237 187 aa17.23■□□□□ 0.35
CIRBP-240ENST00000592815 DDX6P26196 483 aaKnown RBP eCLIP17.23■□□□□ 0.35
CIRBP-240ENST00000592815 CTHP32929 405 aa17.23■□□□□ 0.35
CIRBP-240ENST00000592815 ID4P47928 161 aa17.23■□□□□ 0.35
CIRBP-240ENST00000592815 CXCL12P48061 93 aa17.23■□□□□ 0.35
CIRBP-240ENST00000592815 CCR3P51677 355 aa17.23■□□□□ 0.35
CIRBP-240ENST00000592815 SNRPFP62306 86 aaKnown RBP17.23■□□□□ 0.35
CIRBP-240ENST00000592815 DNM1Q05193 864 aaKnown RBP17.23■□□□□ 0.35
CIRBP-240ENST00000592815 EHHADHQ08426 723 aa17.23■□□□□ 0.35
CIRBP-240ENST00000592815 CUL4BQ13620 913 aa17.23■□□□□ 0.35
CIRBP-240ENST00000592815 LRRC32Q14392 662 aa17.23■□□□□ 0.35
CIRBP-240ENST00000592815 PPP2R5DQ14738 602 aa17.23■□□□□ 0.35
CIRBP-240ENST00000592815 ITPRIPL2Q3MIP1 535 aa17.23■□□□□ 0.35
CIRBP-240ENST00000592815 FAM171BQ6P995 826 aa17.23■□□□□ 0.35
CIRBP-240ENST00000592815 HS2ST1Q7LGA3 356 aa17.23■□□□□ 0.35
CIRBP-240ENST00000592815 LIMS2Q7Z4I7 341 aa17.23■□□□□ 0.35
CIRBP-240ENST00000592815 MON1AQ86VX9 555 aa17.23■□□□□ 0.35
CIRBP-240ENST00000592815 XXYLT1Q8NBI6 393 aa17.23■□□□□ 0.35
CIRBP-240ENST00000592815 KBTBD7Q8WVZ9 684 aa17.23■□□□□ 0.35
CIRBP-240ENST00000592815 USP13Q92995 863 aaPredicted RBP17.23■□□□□ 0.35
CIRBP-240ENST00000592815 CCDC127Q96BQ5 260 aa17.23■□□□□ 0.35
CIRBP-240ENST00000592815 FNBP1Q96RU3 617 aa17.23■□□□□ 0.35
CIRBP-240ENST00000592815 MMS19Q96T76 1030 aa17.23■□□□□ 0.35
CIRBP-240ENST00000592815 FAM126AQ9BYI3 521 aaPredicted RBP17.23■□□□□ 0.35
CIRBP-240ENST00000592815 RCOR1Q9UKL0 485 aa17.23■□□□□ 0.35
CIRBP-240ENST00000592815 CCL26Q9Y258 94 aa17.23■□□□□ 0.35
CIRBP-240ENST00000592815 PVALEFA0A1B0GWK0 134 aa17.22■□□□□ 0.35
CIRBP-240ENST00000592815 LILRB5O75023 590 aa17.22■□□□□ 0.35
CIRBP-240ENST00000592815 NOL4O94818 638 aa17.22■□□□□ 0.35
CIRBP-240ENST00000592815 CST3P01034 146 aaPredicted RBP17.22■□□□□ 0.35
CIRBP-240ENST00000592815 NRLP54845 237 aa17.22■□□□□ 0.35
CIRBP-240ENST00000592815 PSMC1P62191 440 aaKnown RBP17.22■□□□□ 0.35
CIRBP-240ENST00000592815 SATB1Q01826 763 aa17.22■□□□□ 0.35
CIRBP-240ENST00000592815 CYP24A1Q07973 514 aa17.22■□□□□ 0.35
CIRBP-240ENST00000592815 GAS6Q14393 721 aa17.22■□□□□ 0.35
CIRBP-240ENST00000592815 PSMD6Q15008 389 aa17.22■□□□□ 0.35
CIRBP-240ENST00000592815 PON2Q15165 354 aa17.22■□□□□ 0.35
CIRBP-240ENST00000592815 CFAP221Q4G0U5 840 aa17.22■□□□□ 0.35
CIRBP-240ENST00000592815 GRAMD1CQ8IYS0 662 aa17.22■□□□□ 0.35
CIRBP-240ENST00000592815 SYT15Q9BQS2 421 aa17.22■□□□□ 0.35
CIRBP-240ENST00000592815 TDP1Q9NUW8 608 aa17.22■□□□□ 0.35
CIRBP-240ENST00000592815 MAGEC2Q9UBF1 373 aaPredicted RBP17.22■□□□□ 0.35
CIRBP-240ENST00000592815 UXTQ9UBK9 157 aaPredicted RBP17.22■□□□□ 0.35
CIRBP-240ENST00000592815 CDH9Q9ULB4 789 aa17.22■□□□□ 0.35
CIRBP-240ENST00000592815 UBE4BO95155 1302 aa17.21■□□□□ 0.35
CIRBP-240ENST00000592815 TCHHQ07283 1943 aa17.21■□□□□ 0.35
CIRBP-240ENST00000592815 TICRRQ7Z2Z1 1910 aa17.21■□□□□ 0.35
CIRBP-240ENST00000592815 OTOGLQ3ZCN5 2332 aa17.21■□□□□ 0.35
CIRBP-240ENST00000592815 SOBPA7XYQ1 873 aa17.21■□□□□ 0.35
CIRBP-240ENST00000592815 TDGF1P13385 188 aa17.21■□□□□ 0.35
CIRBP-240ENST00000592815 WARSP23381 471 aaKnown RBP17.21■□□□□ 0.35
CIRBP-240ENST00000592815 GNL1P36915 607 aaPredicted RBP17.21■□□□□ 0.35
CIRBP-240ENST00000592815 WDR44Q5JSH3 913 aa17.21■□□□□ 0.35
CIRBP-240ENST00000592815 DGKKQ5KSL6 1271 aa17.21■□□□□ 0.35
CIRBP-240ENST00000592815 C4orf50Q6ZRC1 276 aa17.21■□□□□ 0.35
CIRBP-240ENST00000592815 CEP57L1Q8IYX8 460 aa17.21■□□□□ 0.35
CIRBP-240ENST00000592815 SPEM1Q8N4L4 309 aa17.21■□□□□ 0.35
CIRBP-240ENST00000592815 TRMT2BQ96GJ1 504 aaKnown RBP17.21■□□□□ 0.35
CIRBP-240ENST00000592815 FUBP3Q96I24 572 aaKnown RBP eCLIP17.21■□□□□ 0.35
CIRBP-240ENST00000592815 MYRFLQ96LU7 910 aa17.21■□□□□ 0.35
CIRBP-240ENST00000592815 CYP2S1Q96SQ9 504 aa17.21■□□□□ 0.35
CIRBP-240ENST00000592815 CGRRF1Q99675 332 aa17.21■□□□□ 0.35
CIRBP-240ENST00000592815 FAM83CQ9BQN1 747 aa17.21■□□□□ 0.35
CIRBP-240ENST00000592815 TRPC7Q9HCX4 862 aa17.21■□□□□ 0.35
CIRBP-240ENST00000592815 CRTAC1Q9NQ79 661 aa17.21■□□□□ 0.35
CIRBP-240ENST00000592815 NCDNQ9UBB6 729 aa17.21■□□□□ 0.35
CIRBP-240ENST00000592815 SERTAD1Q9UHV2 236 aa17.21■□□□□ 0.35
CIRBP-240ENST00000592815 FRYLO94915 3013 aa17.21■□□□□ 0.34
CIRBP-240ENST00000592815 SLFN14P0C7P3 912 aa17.2■□□□□ 0.34
CIRBP-240ENST00000592815 BDNFP23560 247 aa17.2■□□□□ 0.34
CIRBP-240ENST00000592815 MAGEA11P43364 429 aa17.2■□□□□ 0.34
CIRBP-240ENST00000592815 KNOP1Q1ED39 458 aaKnown RBP17.2■□□□□ 0.34
CIRBP-240ENST00000592815 BMT2Q1RMZ1 405 aa17.2■□□□□ 0.34
CIRBP-240ENST00000592815 TRIM68Q6AZZ1 485 aa17.2■□□□□ 0.34
CIRBP-240ENST00000592815 CC2D1AQ6P1N0 951 aaPredicted RBP17.2■□□□□ 0.34
CIRBP-240ENST00000592815 Q6ZS52 159 aa17.2■□□□□ 0.34
CIRBP-240ENST00000592815 ZNF516Q92618 1163 aa17.2■□□□□ 0.34
CIRBP-240ENST00000592815 MYLPFQ96A32 169 aa17.2■□□□□ 0.34
CIRBP-240ENST00000592815 MRPL45Q9BRJ2 306 aaKnown RBP17.2■□□□□ 0.34
CIRBP-240ENST00000592815 EPC1Q9H2F5 836 aa17.2■□□□□ 0.34
CIRBP-240ENST00000592815 SNX25Q9H3E2 840 aa17.2■□□□□ 0.34
CIRBP-240ENST00000592815 EBF3Q9H4W6 596 aa17.2■□□□□ 0.34
CIRBP-240ENST00000592815 CGNQ9P2M7 1197 aaKnown RBP17.2■□□□□ 0.34
CIRBP-240ENST00000592815 SMG5Q9UPR3 1016 aaKnown RBP17.2■□□□□ 0.34
CIRBP-240ENST00000592815 COL4A2P08572 1712 aa17.2■□□□□ 0.34
CIRBP-240ENST00000592815 EXOC3O60645 756 aa17.19■□□□□ 0.34
CIRBP-240ENST00000592815 TADA3O75528 432 aa17.19■□□□□ 0.34
CIRBP-240ENST00000592815 GRIK1P39086 918 aa17.19■□□□□ 0.34
CIRBP-240ENST00000592815 CYP27A1Q02318 531 aa17.19■□□□□ 0.34
CIRBP-240ENST00000592815 TRPC3Q13507 836 aa17.19■□□□□ 0.34
CIRBP-240ENST00000592815 RUNX3Q13761 415 aa17.19■□□□□ 0.34
CIRBP-240ENST00000592815 MAPRE1Q15691 268 aaKnown RBP17.19■□□□□ 0.34
CIRBP-240ENST00000592815 WDR72Q3MJ13 1102 aa17.19■□□□□ 0.34
CIRBP-240ENST00000592815 VSTM1Q6UX27 236 aa17.19■□□□□ 0.34
CIRBP-240ENST00000592815 TTC16Q8NEE8 873 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms