RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 DLGAP5Q15398 846 aa15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 CIAPIN1Q6FI81 312 aa15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 DNAJC24Q6P3W2 148 aa15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 RFWD3Q6PCD5 774 aa15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 GPRASP2Q96D09 838 aa15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 NSL1Q96IY1 281 aa15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 ZNF333Q96JL9 665 aa15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 MCEEQ96PE7 176 aa15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 WDR83Q9BRX9 315 aaKnown RBP15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 ZNF341Q9BYN7 854 aa15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 ARL8BQ9NVJ2 186 aa15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 ZNF219Q9P2Y4 722 aaPredicted RBP15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 DCTN4Q9UJW0 460 aa15.6■□□□□ 0.09
SMARCA4-219ENST00000592604 LRRD1A4D1F6 860 aa15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 C3orf70A6NLC5 250 aaPredicted RBP15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 SIGLEC16A6NMB1 481 aa15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 VHLP40337 213 aa15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 MAP3K10Q02779 954 aa15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 GAD2Q05329 585 aa15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 ARHGEF16Q5VV41 709 aa15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 ANKRD22Q5VYY1 191 aa15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 POLNQ7Z5Q5 900 aa15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 FAM136AQ96C01 138 aa15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 CGRRF1Q99675 332 aa15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 CYP26B1Q9NR63 512 aa15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 RBAKQ9NYW8 714 aaPredicted RBP15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 SLC17A7Q9P2U7 560 aa15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 HEY2Q9UBP5 337 aa15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 WDR91A4D1P6 747 aa15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 H0YIN7 160 aa15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 SMAPO00193 183 aa15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 KLC1Q07866 573 aa15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 SLFN12LQ6IEE8 588 aa15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 DCUN1D2Q6PH85 259 aa15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 DSTYKQ6XUX3 929 aa15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 VSIG10LQ86VR7 867 aa15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 CHSY1Q86X52 802 aa15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 LPAR1Q92633 364 aa15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 PTPRN2Q92932 1015 aa15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 SKA1Q96BD8 255 aa15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 TMEM39BQ9GZU3 492 aa15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 KCNK13Q9HB14 408 aa15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 SPATS2LQ9NUQ6 558 aaKnown RBP15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 MTO1Q9Y2Z2 717 aaKnown RBP15.59■□□□□ 0.09
SMARCA4-219ENST00000592604 KIAA1217Q5T5P2 1943 aa15.58■□□□□ 0.09
SMARCA4-219ENST00000592604 PLSCR1O15162 318 aa15.58■□□□□ 0.09
SMARCA4-219ENST00000592604 NPTXRO95502 500 aa15.58■□□□□ 0.09
SMARCA4-219ENST00000592604 LDHAP00338 332 aaKnown RBP15.58■□□□□ 0.09
SMARCA4-219ENST00000592604 IL1BP01584 269 aa15.58■□□□□ 0.09
SMARCA4-219ENST00000592604 ARFIP2P53365 341 aa15.58■□□□□ 0.09
SMARCA4-219ENST00000592604 OVGP1Q12889 678 aa15.58■□□□□ 0.09
SMARCA4-219ENST00000592604 KRT72Q14CN4 511 aa15.58■□□□□ 0.09
SMARCA4-219ENST00000592604 SWSAP1Q6NVH7 229 aa15.58■□□□□ 0.09
SMARCA4-219ENST00000592604 TSSK1BQ9BXA7 367 aa15.58■□□□□ 0.09
SMARCA4-219ENST00000592604 ZNF518BQ9C0D4 1074 aa15.58■□□□□ 0.09
SMARCA4-219ENST00000592604 NVLO15381 856 aaKnown RBP15.58■□□□□ 0.08
SMARCA4-219ENST00000592604 PSAPP07602 524 aa15.58■□□□□ 0.08
SMARCA4-219ENST00000592604 ETV4P43268 484 aa15.58■□□□□ 0.08
SMARCA4-219ENST00000592604 OCRLQ01968 901 aa15.58■□□□□ 0.08
SMARCA4-219ENST00000592604 RSBN1LQ6PCB5 846 aaPredicted RBP15.58■□□□□ 0.08
SMARCA4-219ENST00000592604 APBB1IPQ7Z5R6 666 aaPredicted RBP15.58■□□□□ 0.08
SMARCA4-219ENST00000592604 RHPN2Q8IUC4 686 aa15.58■□□□□ 0.08
SMARCA4-219ENST00000592604 TTC13Q8NBP0 860 aa15.58■□□□□ 0.08
SMARCA4-219ENST00000592604 FBXO36Q8NEA4 188 aa15.58■□□□□ 0.08
SMARCA4-219ENST00000592604 ACTL9Q8TC94 416 aa15.58■□□□□ 0.08
SMARCA4-219ENST00000592604 ACSF2Q96CM8 615 aaPredicted RBP15.58■□□□□ 0.08
SMARCA4-219ENST00000592604 YIPF3Q9GZM5 350 aa15.58■□□□□ 0.08
SMARCA4-219ENST00000592604 MMADHCQ9H3L0 296 aaPredicted RBP15.58■□□□□ 0.08
SMARCA4-219ENST00000592604 NMRK1Q9NWW6 199 aa15.58■□□□□ 0.08
SMARCA4-219ENST00000592604 PGAP2Q9UHJ9 254 aa15.58■□□□□ 0.08
SMARCA4-219ENST00000592604 CNTNAP2Q9UHC6 1331 aa15.58■□□□□ 0.08
SMARCA4-219ENST00000592604 CFAP69A5D8W1 941 aa15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 KCNA2P16389 499 aa15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 RPL22P35268 128 aaKnown RBP15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 PEX19P40855 299 aa15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 GDF10P55107 478 aa15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 CDK16Q00536 496 aa15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 MUM1Q2TAK8 710 aa15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 IRGCQ6NXR0 463 aa15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 FAM83AQ86UY5 434 aa15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 TMEM35BQ8NCS4 154 aa15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 OR5B17Q8NGF7 314 aa15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 GMLQ99445 158 aa15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 SYT15Q9BQS2 421 aa15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 SEPT9Q9UHD8 586 aaPredicted RBP15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 A0A0G2JND7 137 aa15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 FESP07332 822 aa15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 CDH5P33151 784 aaPredicted RBP15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 OTUD4Q01804 1114 aaKnown RBP15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 NCOA4Q13772 614 aa15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 PRKD1Q15139 912 aaPredicted RBP15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 TAZQ16635 292 aa15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 FAM91A1Q658Y4 838 aa15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 RINLQ6ZS11 566 aa15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 LRRC6Q86X45 466 aa15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 PALM2Q8IXS6 379 aa15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 ZBTB45Q96K62 511 aaPredicted RBP15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 C12orf65Q9H3J6 166 aaKnown RBP15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 EIF4E1BA6NMX2 242 aaKnown RBP15.57■□□□□ 0.08
SMARCA4-219ENST00000592604 DLDP09622 509 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms