RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 CATSPERGQ6ZRH7 1159 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 C4orf33Q8N1A6 199 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 TFAP2BQ92481 460 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 ZNF75CPQ92670 426 aaPredicted RBP12.2□□□□□ -0.46
ZNF540-210ENST00000592533 PCYT2Q99447 389 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 SLC5A4Q9NY91 659 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 CPSF3Q9UKF6 684 aaKnown RBP12.2□□□□□ -0.46
ZNF540-210ENST00000592533 A0A1W2PPM1 405 aa12.19□□□□□ -0.46
ZNF540-210ENST00000592533 EGFRP00533 1210 aa12.19□□□□□ -0.46
ZNF540-210ENST00000592533 WEE2P0C1S8 567 aa12.19□□□□□ -0.46
ZNF540-210ENST00000592533 FGFR1P11362 822 aa12.19□□□□□ -0.46
ZNF540-210ENST00000592533 ATP2A2P16615 1042 aaKnown RBP12.19□□□□□ -0.46
ZNF540-210ENST00000592533 DUOXA2Q1HG44 320 aa12.19□□□□□ -0.46
ZNF540-210ENST00000592533 OTOAQ7RTW8 1153 aa12.19□□□□□ -0.46
ZNF540-210ENST00000592533 ARFGAP1Q8N6T3 406 aa12.19□□□□□ -0.46
ZNF540-210ENST00000592533 SLC7A6OSQ96CW6 309 aaPredicted RBP12.19□□□□□ -0.46
ZNF540-210ENST00000592533 PAIP2Q9BPZ3 127 aaKnown RBP12.19□□□□□ -0.46
ZNF540-210ENST00000592533 MRPL4Q9BYD3 311 aaKnown RBP12.19□□□□□ -0.46
ZNF540-210ENST00000592533 MTMR12Q9C0I1 747 aa12.19□□□□□ -0.46
ZNF540-210ENST00000592533 XYLT2Q9H1B5 865 aa12.19□□□□□ -0.46
ZNF540-210ENST00000592533 SAR1AQ9NR31 198 aa12.19□□□□□ -0.46
ZNF540-210ENST00000592533 SCAF8Q9UPN6 1271 aaKnown RBP12.19□□□□□ -0.46
ZNF540-210ENST00000592533 CEP83Q9Y592 693 aa12.19□□□□□ -0.46
ZNF540-210ENST00000592533 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.19□□□□□ -0.46
ZNF540-210ENST00000592533 OGTO15294 1046 aa12.19□□□□□ -0.46
ZNF540-210ENST00000592533 LRCH4O75427 683 aa12.19□□□□□ -0.46
ZNF540-210ENST00000592533 FAM155BO75949 473 aa12.19□□□□□ -0.46
ZNF540-210ENST00000592533 DPEP1P16444 411 aa12.19□□□□□ -0.46
ZNF540-210ENST00000592533 POLR2BP30876 1174 aaKnown RBP12.19□□□□□ -0.46
ZNF540-210ENST00000592533 TNFSF9P41273 254 aa12.19□□□□□ -0.46
ZNF540-210ENST00000592533 YWHAEP62258 255 aaKnown RBP12.19□□□□□ -0.46
ZNF540-210ENST00000592533 OTUD4Q01804 1114 aaKnown RBP12.19□□□□□ -0.46
ZNF540-210ENST00000592533 HHATQ5VTY9 493 aa12.19□□□□□ -0.46
ZNF540-210ENST00000592533 VSIG1Q86XK7 387 aa12.19□□□□□ -0.46
ZNF540-210ENST00000592533 BANPQ8N9N5 519 aa12.19□□□□□ -0.46
ZNF540-210ENST00000592533 ACTL9Q8TC94 416 aa12.19□□□□□ -0.46
ZNF540-210ENST00000592533 DCAKDQ8WVC6 231 aa12.19□□□□□ -0.46
ZNF540-210ENST00000592533 ZNF570Q96NI8 536 aa12.19□□□□□ -0.46
ZNF540-210ENST00000592533 ACO2Q99798 780 aaKnown RBP12.19□□□□□ -0.46
ZNF540-210ENST00000592533 VPS11Q9H270 941 aa12.19□□□□□ -0.46
ZNF540-210ENST00000592533 STK38LQ9Y2H1 464 aa12.19□□□□□ -0.46
ZNF540-210ENST00000592533 IL1BP01584 269 aa12.18□□□□□ -0.46
ZNF540-210ENST00000592533 KRT4P19013 534 aa12.18□□□□□ -0.46
ZNF540-210ENST00000592533 PROZP22891 400 aa12.18□□□□□ -0.46
ZNF540-210ENST00000592533 KDELR1P24390 212 aa12.18□□□□□ -0.46
ZNF540-210ENST00000592533 RASSF2P50749 326 aa12.18□□□□□ -0.46
ZNF540-210ENST00000592533 CLNS1AP54105 237 aaKnown RBP12.18□□□□□ -0.46
ZNF540-210ENST00000592533 PTPN20Q4JDL3 420 aa12.18□□□□□ -0.46
ZNF540-210ENST00000592533 CMPK2Q5EBM0 449 aa12.18□□□□□ -0.46
ZNF540-210ENST00000592533 FNBP1LQ5T0N5 605 aa12.18□□□□□ -0.46
ZNF540-210ENST00000592533 LVRNQ6Q4G3 990 aa12.18□□□□□ -0.46
ZNF540-210ENST00000592533 ENDOVQ8N8Q3 282 aaKnown RBP12.18□□□□□ -0.46
ZNF540-210ENST00000592533 NRBP2Q9NSY0 501 aa12.18□□□□□ -0.46
ZNF540-210ENST00000592533 STK32BQ9NY57 414 aa12.18□□□□□ -0.46
ZNF540-210ENST00000592533 WDR35Q9P2L0 1181 aa12.18□□□□□ -0.46
ZNF540-210ENST00000592533 TTLL13PA6NNM8 815 aa12.18□□□□□ -0.46
ZNF540-210ENST00000592533 LIN7AO14910 233 aaPredicted RBP12.18□□□□□ -0.46
ZNF540-210ENST00000592533 HOXC6P09630 235 aa12.18□□□□□ -0.46
ZNF540-210ENST00000592533 GNAZP19086 355 aa12.18□□□□□ -0.46
ZNF540-210ENST00000592533 GDF10P55107 478 aa12.18□□□□□ -0.46
ZNF540-210ENST00000592533 ACAP1Q15027 740 aa12.18□□□□□ -0.46
ZNF540-210ENST00000592533 MSS51Q4VC12 460 aa12.18□□□□□ -0.46
ZNF540-210ENST00000592533 ZFYVE27Q5T4F4 411 aa12.18□□□□□ -0.46
ZNF540-210ENST00000592533 ANKRD22Q5VYY1 191 aa12.18□□□□□ -0.46
ZNF540-210ENST00000592533 CHST13Q8NET6 341 aa12.18□□□□□ -0.46
ZNF540-210ENST00000592533 PYROXD1Q8WU10 500 aa12.18□□□□□ -0.46
ZNF540-210ENST00000592533 PAFAH2Q99487 392 aa12.18□□□□□ -0.46
ZNF540-210ENST00000592533 GAS2O43903 313 aaKnown RBP12.17□□□□□ -0.46
ZNF540-210ENST00000592533 FARP2O94887 1054 aaPredicted RBP12.17□□□□□ -0.46
ZNF540-210ENST00000592533 DHRS4L1P0CG22 281 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 PSMA2P25787 234 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 IL1R2P27930 398 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 RFC1P35251 1148 aaPredicted RBP12.17□□□□□ -0.46
ZNF540-210ENST00000592533 RPL22P35268 128 aaKnown RBP12.17□□□□□ -0.46
ZNF540-210ENST00000592533 HMGCS2P54868 508 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 TFDP1Q14186 410 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 HADHQ16836 314 aaKnown RBP12.17□□□□□ -0.46
ZNF540-210ENST00000592533 CTC1Q2NKJ3 1217 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 WASHC2DQ5SRD0 308 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 NBPF12Q5TAG4 269 aaPredicted RBP12.17□□□□□ -0.46
ZNF540-210ENST00000592533 CHSY1Q86X52 802 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 CMASQ8NFW8 434 aaPredicted RBP12.17□□□□□ -0.46
ZNF540-210ENST00000592533 HAUS1Q96CS2 278 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 BCO2Q9BYV7 579 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 RNPEPL1Q9HAU8 725 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 PAPPA2Q9BXP8 1791 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 SPDYE16A6NNV3 312 aaPredicted RBP12.17□□□□□ -0.46
ZNF540-210ENST00000592533 APOC4-APOC2K7ER74 178 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 MED7O43513 233 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 B4GALT4O60513 344 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 APOC2P02655 101 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 UBA1P22314 1058 aaKnown RBP12.17□□□□□ -0.46
ZNF540-210ENST00000592533 EDNRBP24530 442 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 SEZ6Q53EL9 994 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 HP1BP3Q5SSJ5 553 aaPredicted RBP12.17□□□□□ -0.46
ZNF540-210ENST00000592533 CYP4A22Q5TCH4 519 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 FYB2Q5VWT5 728 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 DENND1BQ6P3S1 775 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 CCDC125Q86Z20 511 aa12.17□□□□□ -0.46
ZNF540-210ENST00000592533 ACSF2Q96CM8 615 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms