RNA–Protein interactions for RNA: ENST00000591709.1

POLR2E-208, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-208ENST00000591709 CLDN3O15551 220 aa18.26■□□□□ 0.51
POLR2E-208ENST00000591709 XPOTO43592 962 aaKnown RBP18.26■□□□□ 0.51
POLR2E-208ENST00000591709 CLTAP09496 248 aa18.26■□□□□ 0.51
POLR2E-208ENST00000591709 LONP1P36776 959 aaKnown RBP18.26■□□□□ 0.51
POLR2E-208ENST00000591709 LILRA4P59901 499 aa18.26■□□□□ 0.51
POLR2E-208ENST00000591709 SIM1P81133 766 aaPredicted RBP18.26■□□□□ 0.51
POLR2E-208ENST00000591709 MCL1Q07820 350 aa18.26■□□□□ 0.51
POLR2E-208ENST00000591709 MTF1Q14872 753 aa18.26■□□□□ 0.51
POLR2E-208ENST00000591709 PDGFRLQ15198 375 aa18.26■□□□□ 0.51
POLR2E-208ENST00000591709 RINT1Q6NUQ1 792 aa18.26■□□□□ 0.51
POLR2E-208ENST00000591709 ARMCX6Q7L4S7 300 aa18.26■□□□□ 0.51
POLR2E-208ENST00000591709 RASSF8Q8NHQ8 419 aa18.26■□□□□ 0.51
POLR2E-208ENST00000591709 EXOC4Q96A65 974 aa18.26■□□□□ 0.51
POLR2E-208ENST00000591709 CALML4Q96GE6 196 aa18.26■□□□□ 0.51
POLR2E-208ENST00000591709 ZCWPW1Q9H0M4 648 aa18.26■□□□□ 0.51
POLR2E-208ENST00000591709 ZSCAN16Q9H4T2 348 aaPredicted RBP18.26■□□□□ 0.51
POLR2E-208ENST00000591709 ECT2Q9H8V3 914 aa18.26■□□□□ 0.51
POLR2E-208ENST00000591709 ABI2Q9NYB9 513 aaPredicted RBP18.26■□□□□ 0.51
POLR2E-208ENST00000591709 LACTBL1A8MY62 500 aa18.25■□□□□ 0.51
POLR2E-208ENST00000591709 F11P03951 625 aa18.25■□□□□ 0.51
POLR2E-208ENST00000591709 DDX6P26196 483 aaKnown RBP eCLIP18.25■□□□□ 0.51
POLR2E-208ENST00000591709 SEC13P55735 322 aa18.25■□□□□ 0.51
POLR2E-208ENST00000591709 RAD51AP2Q09MP3 1159 aa18.25■□□□□ 0.51
POLR2E-208ENST00000591709 LMAN2Q12907 356 aa18.25■□□□□ 0.51
POLR2E-208ENST00000591709 TMEM119Q4V9L6 283 aa18.25■□□□□ 0.51
POLR2E-208ENST00000591709 C1orf186Q6ZWK4 172 aa18.25■□□□□ 0.51
POLR2E-208ENST00000591709 TTC30AQ86WT1 665 aa18.25■□□□□ 0.51
POLR2E-208ENST00000591709 MDGA1Q8NFP4 955 aa18.25■□□□□ 0.51
POLR2E-208ENST00000591709 EVLQ9UI08 416 aaPredicted RBP18.25■□□□□ 0.51
POLR2E-208ENST00000591709 MAGED2Q9UNF1 606 aaPredicted RBP18.25■□□□□ 0.51
POLR2E-208ENST00000591709 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.25■□□□□ 0.51
POLR2E-208ENST00000591709 WNT6Q9Y6F9 365 aa18.25■□□□□ 0.51
POLR2E-208ENST00000591709 ATXN2Q99700 1313 aaKnown RBP18.24■□□□□ 0.51
POLR2E-208ENST00000591709 ANTXRLA6NF34 631 aa18.24■□□□□ 0.51
POLR2E-208ENST00000591709 PLA2G4BP0C869 781 aa18.24■□□□□ 0.51
POLR2E-208ENST00000591709 HAPLN1P10915 354 aaPredicted RBP18.24■□□□□ 0.51
POLR2E-208ENST00000591709 HMGA1P17096 107 aaKnown RBP18.24■□□□□ 0.51
POLR2E-208ENST00000591709 C19orf48Q6RUI8 117 aa18.24■□□□□ 0.51
POLR2E-208ENST00000591709 ZPBP2Q6X784 338 aa18.24■□□□□ 0.51
POLR2E-208ENST00000591709 RASSF3Q86WH2 238 aa18.24■□□□□ 0.51
POLR2E-208ENST00000591709 PROSER1Q86XN7 944 aa18.24■□□□□ 0.51
POLR2E-208ENST00000591709 TMEM161BQ8NDZ6 487 aa18.24■□□□□ 0.51
POLR2E-208ENST00000591709 MRPS31Q92665 395 aaKnown RBP18.24■□□□□ 0.51
POLR2E-208ENST00000591709 BICD1Q96G01 975 aa18.24■□□□□ 0.51
POLR2E-208ENST00000591709 CNOT6LQ96LI5 555 aaKnown RBP18.24■□□□□ 0.51
POLR2E-208ENST00000591709 USP28Q96RU2 1077 aa18.24■□□□□ 0.51
POLR2E-208ENST00000591709 NUSAP1Q9BXS6 441 aaKnown RBP18.24■□□□□ 0.51
POLR2E-208ENST00000591709 C17orf75Q9HAS0 396 aa18.24■□□□□ 0.51
POLR2E-208ENST00000591709 DUS2Q9NX74 493 aaKnown RBP18.24■□□□□ 0.51
POLR2E-208ENST00000591709 CIZ1Q9ULV3 898 aaPredicted RBP18.24■□□□□ 0.51
POLR2E-208ENST00000591709 SETXQ7Z333 2677 aaKnown RBP18.24■□□□□ 0.51
POLR2E-208ENST00000591709 SLC26A4O43511 780 aa18.23■□□□□ 0.51
POLR2E-208ENST00000591709 MAPTP10636 758 aaKnown RBP18.23■□□□□ 0.51
POLR2E-208ENST00000591709 ENGP17813 658 aa18.23■□□□□ 0.51
POLR2E-208ENST00000591709 IFNAR2P48551 515 aa18.23■□□□□ 0.51
POLR2E-208ENST00000591709 GPR15P49685 360 aa18.23■□□□□ 0.51
POLR2E-208ENST00000591709 SLC12A3P55017 1021 aa18.23■□□□□ 0.51
POLR2E-208ENST00000591709 DHX8Q14562 1220 aaKnown RBP18.23■□□□□ 0.51
POLR2E-208ENST00000591709 ENOX2Q16206 610 aaKnown RBP18.23■□□□□ 0.51
POLR2E-208ENST00000591709 C2orf27AQ580R0 203 aa18.23■□□□□ 0.51
POLR2E-208ENST00000591709 LRRTM3Q86VH5 581 aa18.23■□□□□ 0.51
POLR2E-208ENST00000591709 KCTD17Q8N5Z5 321 aa18.23■□□□□ 0.51
POLR2E-208ENST00000591709 SYT2Q8N9I0 419 aaPredicted RBP18.23■□□□□ 0.51
POLR2E-208ENST00000591709 SPPL2BQ8TCT7 592 aa18.23■□□□□ 0.51
POLR2E-208ENST00000591709 USP33Q8TEY7 942 aa18.23■□□□□ 0.51
POLR2E-208ENST00000591709 ATP2A3Q93084 1043 aa18.23■□□□□ 0.51
POLR2E-208ENST00000591709 FAM212AQ96EL1 285 aa18.23■□□□□ 0.51
POLR2E-208ENST00000591709 CLIC6Q96NY7 704 aa18.23■□□□□ 0.51
POLR2E-208ENST00000591709 FBXO2Q9UK22 296 aaPredicted RBP18.23■□□□□ 0.51
POLR2E-208ENST00000591709 IGSF10Q6WRI0 2623 aa18.23■□□□□ 0.51
POLR2E-208ENST00000591709 SHROOM3Q8TF72 1996 aa18.22■□□□□ 0.51
POLR2E-208ENST00000591709 LAMA5O15230 3695 aa18.22■□□□□ 0.51
POLR2E-208ENST00000591709 TADA3O75528 432 aa18.22■□□□□ 0.51
POLR2E-208ENST00000591709 CYP11A1P05108 521 aa18.22■□□□□ 0.51
POLR2E-208ENST00000591709 PLCG1P19174 1290 aa18.22■□□□□ 0.51
POLR2E-208ENST00000591709 USP4Q13107 963 aa18.22■□□□□ 0.51
POLR2E-208ENST00000591709 ZNF268Q14587 947 aaPredicted RBP18.22■□□□□ 0.51
POLR2E-208ENST00000591709 ZNF77Q15935 545 aa18.22■□□□□ 0.51
POLR2E-208ENST00000591709 SDHAF4Q5VUM1 108 aa18.22■□□□□ 0.51
POLR2E-208ENST00000591709 SPATA1Q5VX52 437 aa18.22■□□□□ 0.51
POLR2E-208ENST00000591709 C9orf57Q5W0N0 161 aa18.22■□□□□ 0.51
POLR2E-208ENST00000591709 JADE1Q6IE81 842 aa18.22■□□□□ 0.51
POLR2E-208ENST00000591709 USP49Q70CQ1 688 aa18.22■□□□□ 0.51
POLR2E-208ENST00000591709 MON1AQ86VX9 555 aa18.22■□□□□ 0.51
POLR2E-208ENST00000591709 CCDC33Q8N5R6 958 aa18.22■□□□□ 0.51
POLR2E-208ENST00000591709 C2orf15Q8WU43 125 aaKnown RBP18.22■□□□□ 0.51
POLR2E-208ENST00000591709 OSCP1Q8WVF1 389 aa18.22■□□□□ 0.51
POLR2E-208ENST00000591709 RLN3Q8WXF3 142 aa18.22■□□□□ 0.51
POLR2E-208ENST00000591709 EPSTI1Q96J88 318 aa18.22■□□□□ 0.51
POLR2E-208ENST00000591709 RPF1Q9H9Y2 349 aaKnown RBP18.22■□□□□ 0.51
POLR2E-208ENST00000591709 TRPC7Q9HCX4 862 aa18.22■□□□□ 0.51
POLR2E-208ENST00000591709 FSCN3Q9NQT6 498 aa18.22■□□□□ 0.51
POLR2E-208ENST00000591709 TMEM74BQ9NUR3 256 aa18.22■□□□□ 0.51
POLR2E-208ENST00000591709 SRPRBQ9Y5M8 271 aaKnown RBP18.22■□□□□ 0.51
POLR2E-208ENST00000591709 APC2O95996 2303 aa18.21■□□□□ 0.51
POLR2E-208ENST00000591709 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.21■□□□□ 0.51
POLR2E-208ENST00000591709 NPHP3-ACAD11A0A0J9YXS1 232 aa18.21■□□□□ 0.51
POLR2E-208ENST00000591709 NFICP08651 508 aa18.21■□□□□ 0.51
POLR2E-208ENST00000591709 ZSCAN22P10073 491 aaPredicted RBP18.21■□□□□ 0.51
POLR2E-208ENST00000591709 PLS3P13797 630 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms