RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 A0A1W2PRU2 124 aa12.29□□□□□ -0.44
VMP1-211ENST00000591315 GOLGA6L22H0YM25 854 aa12.29□□□□□ -0.44
VMP1-211ENST00000591315 HMGA1P17096 107 aaKnown RBP12.29□□□□□ -0.44
VMP1-211ENST00000591315 FMO5P49326 533 aa12.29□□□□□ -0.44
VMP1-211ENST00000591315 TUFMP49411 452 aaKnown RBP12.29□□□□□ -0.44
VMP1-211ENST00000591315 NDST1P52848 882 aa12.29□□□□□ -0.44
VMP1-211ENST00000591315 ZXDAP98168 799 aa12.29□□□□□ -0.44
VMP1-211ENST00000591315 PLD1Q13393 1074 aa12.29□□□□□ -0.44
VMP1-211ENST00000591315 HTR4Q13639 388 aa12.29□□□□□ -0.44
VMP1-211ENST00000591315 IQCEQ6IPM2 695 aa12.29□□□□□ -0.44
VMP1-211ENST00000591315 FOXR2Q6PJQ5 311 aa12.29□□□□□ -0.44
VMP1-211ENST00000591315 RBM43Q6ZSC3 357 aaKnown RBP12.29□□□□□ -0.44
VMP1-211ENST00000591315 PAQR9Q6ZVX9 377 aa12.29□□□□□ -0.44
VMP1-211ENST00000591315 PDZD4Q76G19 769 aaPredicted RBP12.29□□□□□ -0.44
VMP1-211ENST00000591315 CREBRFQ8IUR6 639 aa12.29□□□□□ -0.44
VMP1-211ENST00000591315 TRIM59Q8IWR1 403 aa12.29□□□□□ -0.44
VMP1-211ENST00000591315 ELMOD1Q8N336 334 aa12.29□□□□□ -0.44
VMP1-211ENST00000591315 PLCD3Q8N3E9 789 aa12.29□□□□□ -0.44
VMP1-211ENST00000591315 C12orf29Q8N999 325 aa12.29□□□□□ -0.44
VMP1-211ENST00000591315 B3GALNT2Q8NCR0 500 aa12.29□□□□□ -0.44
VMP1-211ENST00000591315 FBXL13Q8NEE6 735 aa12.29□□□□□ -0.44
VMP1-211ENST00000591315 WHAMMQ8TF30 809 aa12.29□□□□□ -0.44
VMP1-211ENST00000591315 C2orf15Q8WU43 125 aaKnown RBP12.29□□□□□ -0.44
VMP1-211ENST00000591315 TAF4BQ92750 862 aa12.29□□□□□ -0.44
VMP1-211ENST00000591315 PSMG2Q969U7 264 aa12.29□□□□□ -0.44
VMP1-211ENST00000591315 KXD1Q9BQD3 176 aa12.29□□□□□ -0.44
VMP1-211ENST00000591315 PLA2G2FQ9BZM2 168 aa12.29□□□□□ -0.44
VMP1-211ENST00000591315 ELOVL4Q9GZR5 314 aa12.29□□□□□ -0.44
VMP1-211ENST00000591315 AVENQ9NQS1 362 aaPredicted RBP12.29□□□□□ -0.44
VMP1-211ENST00000591315 ASAH2Q9NR71 780 aa12.29□□□□□ -0.44
VMP1-211ENST00000591315 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.29□□□□□ -0.44
VMP1-211ENST00000591315 TMEM63CQ9P1W3 806 aa12.29□□□□□ -0.44
VMP1-211ENST00000591315 NCANO14594 1321 aa12.29□□□□□ -0.44
VMP1-211ENST00000591315 ANHXE9PGG2 379 aa12.28□□□□□ -0.44
VMP1-211ENST00000591315 FAM163BP0C2L3 166 aa12.28□□□□□ -0.44
VMP1-211ENST00000591315 CCDC130P13994 396 aa12.28□□□□□ -0.44
VMP1-211ENST00000591315 GABRR2P28476 465 aa12.28□□□□□ -0.44
VMP1-211ENST00000591315 USP46P62068 366 aa12.28□□□□□ -0.44
VMP1-211ENST00000591315 CYP4F8P98187 520 aa12.28□□□□□ -0.44
VMP1-211ENST00000591315 FAM78AQ5JUQ0 283 aa12.28□□□□□ -0.44
VMP1-211ENST00000591315 IER5LQ5T953 404 aa12.28□□□□□ -0.44
VMP1-211ENST00000591315 CYP4A22Q5TCH4 519 aa12.28□□□□□ -0.44
VMP1-211ENST00000591315 TANGO2Q6ICL3 276 aa12.28□□□□□ -0.44
VMP1-211ENST00000591315 TMEM150AQ86TG1 271 aa12.28□□□□□ -0.44
VMP1-211ENST00000591315 KAT5Q92993 513 aa12.28□□□□□ -0.44
VMP1-211ENST00000591315 RSPRY1Q96DX4 576 aa12.28□□□□□ -0.44
VMP1-211ENST00000591315 CNOT6LQ96LI5 555 aaKnown RBP12.28□□□□□ -0.44
VMP1-211ENST00000591315 NIF3L1Q9GZT8 377 aa12.28□□□□□ -0.44
VMP1-211ENST00000591315 METTL14Q9HCE5 456 aaKnown RBP12.28□□□□□ -0.44
VMP1-211ENST00000591315 ABCB6Q9NP58 842 aa12.28□□□□□ -0.44
VMP1-211ENST00000591315 FAM49BQ9NUQ9 324 aa12.28□□□□□ -0.44
VMP1-211ENST00000591315 HSFX1Q9UBD0 423 aa12.28□□□□□ -0.44
VMP1-211ENST00000591315 MAGEC2Q9UBF1 373 aaPredicted RBP12.28□□□□□ -0.44
VMP1-211ENST00000591315 MAGED2Q9UNF1 606 aaPredicted RBP12.28□□□□□ -0.44
VMP1-211ENST00000591315 COQ4Q9Y3A0 265 aa12.28□□□□□ -0.44
VMP1-211ENST00000591315 NUMBLQ9Y6R0 609 aa12.28□□□□□ -0.44
VMP1-211ENST00000591315 DENND4CQ5VZ89 1909 aa12.28□□□□□ -0.44
VMP1-211ENST00000591315 ZNF638Q14966 1978 aaKnown RBP12.28□□□□□ -0.44
VMP1-211ENST00000591315 F5P12259 2224 aa12.27□□□□□ -0.44
VMP1-211ENST00000591315 OBSL1O75147 1896 aa12.27□□□□□ -0.44
VMP1-211ENST00000591315 SLC38A8A6NNN8 435 aa12.27□□□□□ -0.45
VMP1-211ENST00000591315 F8VP50 259 aa12.27□□□□□ -0.45
VMP1-211ENST00000591315 STX10O60499 249 aa12.27□□□□□ -0.45
VMP1-211ENST00000591315 PDGFBP01127 241 aaPredicted RBP12.27□□□□□ -0.45
VMP1-211ENST00000591315 CALCAP01258 141 aa12.27□□□□□ -0.45
VMP1-211ENST00000591315 P4HA1P13674 534 aa12.27□□□□□ -0.45
VMP1-211ENST00000591315 FCARP24071 287 aa12.27□□□□□ -0.45
VMP1-211ENST00000591315 VIPR2P41587 438 aa12.27□□□□□ -0.45
VMP1-211ENST00000591315 APBA1Q02410 837 aa12.27□□□□□ -0.45
VMP1-211ENST00000591315 KCNH2Q12809 1159 aa12.27□□□□□ -0.45
VMP1-211ENST00000591315 SMARCB1Q12824 385 aa12.27□□□□□ -0.45
VMP1-211ENST00000591315 CFAP221Q4G0U5 840 aa12.27□□□□□ -0.45
VMP1-211ENST00000591315 ZNF394Q53GI3 561 aa12.27□□□□□ -0.45
VMP1-211ENST00000591315 C11orf57Q6ZUT1 292 aaPredicted RBP12.27□□□□□ -0.45
VMP1-211ENST00000591315 FUKQ8N0W3 1084 aa12.27□□□□□ -0.45
VMP1-211ENST00000591315 SLC44A3Q8N4M1 653 aa12.27□□□□□ -0.45
VMP1-211ENST00000591315 LMO3Q8TAP4 145 aa12.27□□□□□ -0.45
VMP1-211ENST00000591315 EDAQ92838 391 aa12.27□□□□□ -0.45
VMP1-211ENST00000591315 IMPG2Q9BZV3 1241 aa12.27□□□□□ -0.45
VMP1-211ENST00000591315 ATXN3LQ9H3M9 355 aa12.27□□□□□ -0.45
VMP1-211ENST00000591315 ASB3Q9Y575 518 aa12.27□□□□□ -0.45
VMP1-211ENST00000591315 ANAPC1Q9H1A4 1944 aa12.27□□□□□ -0.45
VMP1-211ENST00000591315 COL4A3Q01955 1670 aa12.26□□□□□ -0.45
VMP1-211ENST00000591315 ZNF197O14709 1029 aa12.26□□□□□ -0.45
VMP1-211ENST00000591315 CILPO75339 1184 aa12.26□□□□□ -0.45
VMP1-211ENST00000591315 TADA3O75528 432 aa12.26□□□□□ -0.45
VMP1-211ENST00000591315 BEST1O76090 585 aa12.26□□□□□ -0.45
VMP1-211ENST00000591315 F11P03951 625 aa12.26□□□□□ -0.45
VMP1-211ENST00000591315 ALADP13716 330 aa12.26□□□□□ -0.45
VMP1-211ENST00000591315 GRIK1P39086 918 aa12.26□□□□□ -0.45
VMP1-211ENST00000591315 MAGEA11P43364 429 aa12.26□□□□□ -0.45
VMP1-211ENST00000591315 MARSP56192 900 aaKnown RBP12.26□□□□□ -0.45
VMP1-211ENST00000591315 INCA1Q0VD86 236 aa12.26□□□□□ -0.45
VMP1-211ENST00000591315 TDGQ13569 410 aa12.26□□□□□ -0.45
VMP1-211ENST00000591315 VEPH1Q14D04 833 aa12.26□□□□□ -0.45
VMP1-211ENST00000591315 C4orf50Q6ZRC1 276 aa12.26□□□□□ -0.45
VMP1-211ENST00000591315 FAM35AQ86V20 835 aa12.26□□□□□ -0.45
VMP1-211ENST00000591315 ARHGEF19Q8IW93 802 aa12.26□□□□□ -0.45
VMP1-211ENST00000591315 CRYBG2Q8N1P7 616 aa12.26□□□□□ -0.45
VMP1-211ENST00000591315 SLC2A14Q8TDB8 520 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms