RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 CAMK4Q16566 473 aa23.86■■□□□ 1.41
MBD3-208ENST00000590830 MDH1BQ5I0G3 518 aa23.86■■□□□ 1.41
MBD3-208ENST00000590830 CLEC17AQ6ZS10 378 aa23.86■■□□□ 1.41
MBD3-208ENST00000590830 GPIHBP1Q8IV16 184 aa23.86■■□□□ 1.41
MBD3-208ENST00000590830 SIX5Q8N196 739 aa23.86■■□□□ 1.41
MBD3-208ENST00000590830 ZSCAN18Q8TBC5 510 aaPredicted RBP23.86■■□□□ 1.41
MBD3-208ENST00000590830 TAF4BQ92750 862 aa23.86■■□□□ 1.41
MBD3-208ENST00000590830 ATXN3LQ9H3M9 355 aa23.86■■□□□ 1.41
MBD3-208ENST00000590830 TRPV4Q9HBA0 871 aa23.86■■□□□ 1.41
MBD3-208ENST00000590830 FBXL21Q9UKT6 434 aa23.86■■□□□ 1.41
MBD3-208ENST00000590830 F11P03951 625 aa23.85■■□□□ 1.41
MBD3-208ENST00000590830 EPB41P11171 864 aaKnown RBP23.85■■□□□ 1.41
MBD3-208ENST00000590830 BDNFP23560 247 aa23.85■■□□□ 1.41
MBD3-208ENST00000590830 GTF2H1P32780 548 aa23.85■■□□□ 1.41
MBD3-208ENST00000590830 PIK3CAP42336 1068 aa23.85■■□□□ 1.41
MBD3-208ENST00000590830 MAGEA11P43364 429 aa23.85■■□□□ 1.41
MBD3-208ENST00000590830 ASPAP45381 313 aa23.85■■□□□ 1.41
MBD3-208ENST00000590830 RPL10AP62906 217 aaKnown RBP23.85■■□□□ 1.41
MBD3-208ENST00000590830 CYP27A1Q02318 531 aa23.85■■□□□ 1.41
MBD3-208ENST00000590830 TTI2Q6NXR4 508 aa23.85■■□□□ 1.41
MBD3-208ENST00000590830 C4orf50Q6ZRC1 276 aa23.85■■□□□ 1.41
MBD3-208ENST00000590830 SEMA4DQ92854 862 aa23.85■■□□□ 1.41
MBD3-208ENST00000590830 RSPRY1Q96DX4 576 aa23.85■■□□□ 1.41
MBD3-208ENST00000590830 ZFP14Q9HCL3 533 aa23.85■■□□□ 1.41
MBD3-208ENST00000590830 TMEM8AQ9HCN3 771 aa23.85■■□□□ 1.41
MBD3-208ENST00000590830 CA14Q9ULX7 337 aa23.85■■□□□ 1.41
MBD3-208ENST00000590830 SLC38A8A6NNN8 435 aa23.84■■□□□ 1.41
MBD3-208ENST00000590830 PSMA7O14818 248 aa23.84■■□□□ 1.41
MBD3-208ENST00000590830 SLC16A3O15427 465 aaKnown RBP23.84■■□□□ 1.41
MBD3-208ENST00000590830 NOL4O94818 638 aa23.84■■□□□ 1.41
MBD3-208ENST00000590830 FGF19O95750 216 aa23.84■■□□□ 1.41
MBD3-208ENST00000590830 CACNA2D1P54289 1103 aa23.84■■□□□ 1.41
MBD3-208ENST00000590830 CYP4F8P98187 520 aa23.84■■□□□ 1.41
MBD3-208ENST00000590830 MAPRE1Q15691 268 aaKnown RBP23.84■■□□□ 1.41
MBD3-208ENST00000590830 KLHL10Q6JEL2 608 aa23.84■■□□□ 1.41
MBD3-208ENST00000590830 SCN4BQ8IWT1 228 aa23.84■■□□□ 1.41
MBD3-208ENST00000590830 SUGP1Q8IWZ8 645 aaKnown RBP23.84■■□□□ 1.41
MBD3-208ENST00000590830 B3GALNT2Q8NCR0 500 aa23.84■■□□□ 1.41
MBD3-208ENST00000590830 B3GNT5Q9BYG0 378 aa23.84■■□□□ 1.41
MBD3-208ENST00000590830 GPR88Q9GZN0 384 aa23.84■■□□□ 1.41
MBD3-208ENST00000590830 TMEM30AQ9NV96 361 aa23.84■■□□□ 1.41
MBD3-208ENST00000590830 KIAA1468Q9P260 1216 aa23.84■■□□□ 1.41
MBD3-208ENST00000590830 ZDBF2Q9HCK1 2354 aa23.84■■□□□ 1.41
MBD3-208ENST00000590830 CLDN5O00501 218 aa23.83■■□□□ 1.41
MBD3-208ENST00000590830 CLSTN1O94985 981 aa23.83■■□□□ 1.41
MBD3-208ENST00000590830 CSH1P0DML2 217 aa23.83■■□□□ 1.41
MBD3-208ENST00000590830 CSH2P0DML3 217 aa23.83■■□□□ 1.41
MBD3-208ENST00000590830 AVPR2P30518 371 aa23.83■■□□□ 1.41
MBD3-208ENST00000590830 NLRP12P59046 1061 aa23.83■■□□□ 1.41
MBD3-208ENST00000590830 STIM1Q13586 685 aa23.83■■□□□ 1.41
MBD3-208ENST00000590830 TAF12Q16514 161 aa23.83■■□□□ 1.41
MBD3-208ENST00000590830 GPR158Q5T848 1215 aa23.83■■□□□ 1.41
MBD3-208ENST00000590830 CWF19L1Q69YN2 538 aaKnown RBP23.83■■□□□ 1.41
MBD3-208ENST00000590830 KRT39Q6A163 491 aa23.83■■□□□ 1.41
MBD3-208ENST00000590830 VSTM1Q6UX27 236 aa23.83■■□□□ 1.41
MBD3-208ENST00000590830 VITQ6UXI7 678 aa23.83■■□□□ 1.41
MBD3-208ENST00000590830 NELFBQ8WX92 580 aa23.83■■□□□ 1.41
MBD3-208ENST00000590830 LRRC3BQ96PB8 259 aa23.83■■□□□ 1.41
MBD3-208ENST00000590830 SLC46A2Q9BY10 475 aa23.83■■□□□ 1.41
MBD3-208ENST00000590830 SLITRK6Q9H5Y7 841 aa23.83■■□□□ 1.41
MBD3-208ENST00000590830 HMGXB4Q9UGU5 601 aa23.83■■□□□ 1.41
MBD3-208ENST00000590830 MAGED2Q9UNF1 606 aaPredicted RBP23.83■■□□□ 1.41
MBD3-208ENST00000590830 CDC25CP30307 473 aa23.82■■□□□ 1.4
MBD3-208ENST00000590830 ORC1Q13415 861 aa23.82■■□□□ 1.4
MBD3-208ENST00000590830 GRM2Q14416 872 aa23.82■■□□□ 1.4
MBD3-208ENST00000590830 CBWD6Q4V339 395 aa23.82■■□□□ 1.4
MBD3-208ENST00000590830 CBWD3Q5JTY5 395 aa23.82■■□□□ 1.4
MBD3-208ENST00000590830 CBWD5Q5RIA9 395 aa23.82■■□□□ 1.4
MBD3-208ENST00000590830 PAQR9Q6ZVX9 377 aa23.82■■□□□ 1.4
MBD3-208ENST00000590830 ARID3BQ8IVW6 561 aaPredicted RBP23.82■■□□□ 1.4
MBD3-208ENST00000590830 TMEM105Q8N8V8 129 aa23.82■■□□□ 1.4
MBD3-208ENST00000590830 MYRFLQ96LU7 910 aa23.82■■□□□ 1.4
MBD3-208ENST00000590830 BCO2Q9BYV7 579 aa23.82■■□□□ 1.4
MBD3-208ENST00000590830 ZNF518BQ9C0D4 1074 aa23.82■■□□□ 1.4
MBD3-208ENST00000590830 TASP1Q9H6P5 420 aa23.82■■□□□ 1.4
MBD3-208ENST00000590830 HCN4Q9Y3Q4 1203 aa23.82■■□□□ 1.4
MBD3-208ENST00000590830 ZNF318Q5VUA4 2279 aa23.81■■□□□ 1.4
MBD3-208ENST00000590830 PI15O43692 258 aa23.81■■□□□ 1.4
MBD3-208ENST00000590830 P4HA1P13674 534 aa23.81■■□□□ 1.4
MBD3-208ENST00000590830 PPP1R2P41236 205 aa23.81■■□□□ 1.4
MBD3-208ENST00000590830 NDST1P52848 882 aa23.81■■□□□ 1.4
MBD3-208ENST00000590830 STX17P56962 302 aa23.81■■□□□ 1.4
MBD3-208ENST00000590830 NOP14P78316 857 aaKnown RBP23.81■■□□□ 1.4
MBD3-208ENST00000590830 FILIP1Q7Z7B0 1213 aa23.81■■□□□ 1.4
MBD3-208ENST00000590830 ACOT1Q86TX2 421 aa23.81■■□□□ 1.4
MBD3-208ENST00000590830 FLCNQ8NFG4 579 aa23.81■■□□□ 1.4
MBD3-208ENST00000590830 SPATA17Q96L03 361 aa23.81■■□□□ 1.4
MBD3-208ENST00000590830 MFSD1Q9H3U5 465 aa23.81■■□□□ 1.4
MBD3-208ENST00000590830 LMBRD1Q9NUN5 540 aa23.81■■□□□ 1.4
MBD3-208ENST00000590830 CTNND2Q9UQB3 1225 aa23.81■■□□□ 1.4
MBD3-208ENST00000590830 HEPACAM2A8MVW5 462 aa23.8■■□□□ 1.4
MBD3-208ENST00000590830 TADA3O75528 432 aa23.8■■□□□ 1.4
MBD3-208ENST00000590830 GRIK1P39086 918 aa23.8■■□□□ 1.4
MBD3-208ENST00000590830 MXI1P50539 228 aa23.8■■□□□ 1.4
MBD3-208ENST00000590830 USP46P62068 366 aa23.8■■□□□ 1.4
MBD3-208ENST00000590830 ARHGAP15Q53QZ3 475 aa23.8■■□□□ 1.4
MBD3-208ENST00000590830 ASTLQ6HA08 431 aaPredicted RBP23.8■■□□□ 1.4
MBD3-208ENST00000590830 FOXR2Q6PJQ5 311 aa23.8■■□□□ 1.4
MBD3-208ENST00000590830 CRYBG2Q8N1P7 616 aa23.8■■□□□ 1.4
MBD3-208ENST00000590830 SLC35C1Q96A29 364 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms