RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 GRIK1P39086 918 aa12.9□□□□□ -0.34
TPM4-212ENST00000590180 CYP4F8P98187 520 aa12.9□□□□□ -0.34
TPM4-212ENST00000590180 STIM1Q13586 685 aa12.9□□□□□ -0.34
TPM4-212ENST00000590180 CFAP221Q4G0U5 840 aa12.9□□□□□ -0.34
TPM4-212ENST00000590180 C1orf220Q5T0J3 134 aa12.9□□□□□ -0.34
TPM4-212ENST00000590180 STXBP5Q5T5C0 1151 aa12.9□□□□□ -0.34
TPM4-212ENST00000590180 ANKRD40Q6AI12 368 aa12.9□□□□□ -0.34
TPM4-212ENST00000590180 SCARA5Q6ZMJ2 495 aa12.9□□□□□ -0.34
TPM4-212ENST00000590180 YAF2Q8IY57 180 aa12.9□□□□□ -0.34
TPM4-212ENST00000590180 ELOA2Q8IYF1 753 aaPredicted RBP12.9□□□□□ -0.34
TPM4-212ENST00000590180 TMEM105Q8N8V8 129 aa12.9□□□□□ -0.34
TPM4-212ENST00000590180 STKLD1Q8NE28 680 aa12.9□□□□□ -0.34
TPM4-212ENST00000590180 SPATA20Q8TB22 786 aa12.9□□□□□ -0.34
TPM4-212ENST00000590180 MYCBPAPQ8TBZ2 947 aa12.9□□□□□ -0.34
TPM4-212ENST00000590180 MYLPFQ96A32 169 aa12.9□□□□□ -0.34
TPM4-212ENST00000590180 E2F7Q96AV8 911 aa12.9□□□□□ -0.34
TPM4-212ENST00000590180 FUBP3Q96I24 572 aaKnown RBP eCLIP12.9□□□□□ -0.34
TPM4-212ENST00000590180 SHDQ96IW2 340 aa12.9□□□□□ -0.34
TPM4-212ENST00000590180 PRRX2Q99811 253 aa12.9□□□□□ -0.34
TPM4-212ENST00000590180 KCNH6Q9H252 994 aa12.9□□□□□ -0.34
TPM4-212ENST00000590180 TASP1Q9H6P5 420 aa12.9□□□□□ -0.34
TPM4-212ENST00000590180 SMYD3Q9H7B4 428 aa12.9□□□□□ -0.34
TPM4-212ENST00000590180 BRD9Q9H8M2 597 aa12.9□□□□□ -0.34
TPM4-212ENST00000590180 TBC1D17Q9HA65 648 aa12.9□□□□□ -0.34
TPM4-212ENST00000590180 IL21Q9HBE4 155 aa12.9□□□□□ -0.34
TPM4-212ENST00000590180 F11P03951 625 aa12.89□□□□□ -0.35
TPM4-212ENST00000590180 EPB41P11171 864 aaKnown RBP12.89□□□□□ -0.35
TPM4-212ENST00000590180 HMGA1P17096 107 aaKnown RBP12.89□□□□□ -0.35
TPM4-212ENST00000590180 PSMC3P17980 439 aa12.89□□□□□ -0.35
TPM4-212ENST00000590180 AOC1P19801 751 aa12.89□□□□□ -0.35
TPM4-212ENST00000590180 FCARP24071 287 aa12.89□□□□□ -0.35
TPM4-212ENST00000590180 ANXA13P27216 316 aa12.89□□□□□ -0.35
TPM4-212ENST00000590180 GDI1P31150 447 aa12.89□□□□□ -0.35
TPM4-212ENST00000590180 PIK3CAP42336 1068 aa12.89□□□□□ -0.35
TPM4-212ENST00000590180 RAP1GAPP47736 663 aa12.89□□□□□ -0.35
TPM4-212ENST00000590180 PPP3CAQ08209 521 aa12.89□□□□□ -0.35
TPM4-212ENST00000590180 ZCWPW2Q504Y3 356 aa12.89□□□□□ -0.35
TPM4-212ENST00000590180 VSTM1Q6UX27 236 aa12.89□□□□□ -0.35
TPM4-212ENST00000590180 VITQ6UXI7 678 aa12.89□□□□□ -0.35
TPM4-212ENST00000590180 MFSD6LQ8IWD5 586 aa12.89□□□□□ -0.35
TPM4-212ENST00000590180 ADSSL1Q8N142 457 aa12.89□□□□□ -0.35
TPM4-212ENST00000590180 CCDC150Q8NCX0 1101 aa12.89□□□□□ -0.35
TPM4-212ENST00000590180 TAF4BQ92750 862 aa12.89□□□□□ -0.35
TPM4-212ENST00000590180 PCED1BQ96HM7 432 aa12.89□□□□□ -0.35
TPM4-212ENST00000590180 SLC46A2Q9BY10 475 aa12.89□□□□□ -0.35
TPM4-212ENST00000590180 DPEP3Q9H4B8 488 aa12.89□□□□□ -0.35
TPM4-212ENST00000590180 VRTNQ9H8Y1 702 aa12.89□□□□□ -0.35
TPM4-212ENST00000590180 TRPV4Q9HBA0 871 aa12.89□□□□□ -0.35
TPM4-212ENST00000590180 MAN1B1Q9UKM7 699 aa12.89□□□□□ -0.35
TPM4-212ENST00000590180 NME7Q9Y5B8 376 aa12.89□□□□□ -0.35
TPM4-212ENST00000590180 BIN1O00499 593 aa12.88□□□□□ -0.35
TPM4-212ENST00000590180 PSMA7O14818 248 aa12.88□□□□□ -0.35
TPM4-212ENST00000590180 ZNF263O14978 683 aa12.88□□□□□ -0.35
TPM4-212ENST00000590180 MAGEA11P43364 429 aa12.88□□□□□ -0.35
TPM4-212ENST00000590180 NLRP12P59046 1061 aa12.88□□□□□ -0.35
TPM4-212ENST00000590180 FKBP3Q00688 224 aaKnown RBP12.88□□□□□ -0.35
TPM4-212ENST00000590180 MLF2Q15773 248 aaPredicted RBP12.88□□□□□ -0.35
TPM4-212ENST00000590180 COBLL1Q53SF7 1204 aa12.88□□□□□ -0.35
TPM4-212ENST00000590180 TCERG1LQ5VWI1 586 aa12.88□□□□□ -0.35
TPM4-212ENST00000590180 CWF19L1Q69YN2 538 aaKnown RBP12.88□□□□□ -0.35
TPM4-212ENST00000590180 TXNDC8Q6A555 127 aa12.88□□□□□ -0.35
TPM4-212ENST00000590180 SPOPLQ6IQ16 392 aa12.88□□□□□ -0.35
TPM4-212ENST00000590180 KLHL10Q6JEL2 608 aa12.88□□□□□ -0.35
TPM4-212ENST00000590180 PHLDB3Q6NSJ2 640 aa12.88□□□□□ -0.35
TPM4-212ENST00000590180 MAB21L3Q8N8X9 362 aa12.88□□□□□ -0.35
TPM4-212ENST00000590180 B3GALNT2Q8NCR0 500 aa12.88□□□□□ -0.35
TPM4-212ENST00000590180 PRSS33Q8NF86 280 aa12.88□□□□□ -0.35
TPM4-212ENST00000590180 DEPDC1BQ8WUY9 529 aa12.88□□□□□ -0.35
TPM4-212ENST00000590180 MRPS31Q92665 395 aaKnown RBP12.88□□□□□ -0.35
TPM4-212ENST00000590180 IRF7Q92985 503 aa12.88□□□□□ -0.35
TPM4-212ENST00000590180 DHTKD1Q96HY7 919 aaPredicted RBP12.88□□□□□ -0.35
TPM4-212ENST00000590180 MED10Q9BTT4 135 aa12.88□□□□□ -0.35
TPM4-212ENST00000590180 MKNK1Q9BUB5 465 aa12.88□□□□□ -0.35
TPM4-212ENST00000590180 IMPG2Q9BZV3 1241 aa12.88□□□□□ -0.35
TPM4-212ENST00000590180 UXTQ9UBK9 157 aaPredicted RBP12.88□□□□□ -0.35
TPM4-212ENST00000590180 SIT1Q9Y3P8 196 aa12.88□□□□□ -0.35
TPM4-212ENST00000590180 F5P12259 2224 aa12.88□□□□□ -0.35
TPM4-212ENST00000590180 CACNA1HO95180 2353 aa12.87□□□□□ -0.35
TPM4-212ENST00000590180 TRIM49BA6NDI0 452 aa12.87□□□□□ -0.35
TPM4-212ENST00000590180 CLDN5O00501 218 aa12.87□□□□□ -0.35
TPM4-212ENST00000590180 STX10O60499 249 aa12.87□□□□□ -0.35
TPM4-212ENST00000590180 NOL4O94818 638 aa12.87□□□□□ -0.35
TPM4-212ENST00000590180 ASS1P00966 412 aaKnown RBP12.87□□□□□ -0.35
TPM4-212ENST00000590180 CD72P21854 359 aa12.87□□□□□ -0.35
TPM4-212ENST00000590180 CCNE1P24864 410 aa12.87□□□□□ -0.35
TPM4-212ENST00000590180 GTF2H1P32780 548 aa12.87□□□□□ -0.35
TPM4-212ENST00000590180 AVPR1AP37288 418 aa12.87□□□□□ -0.35
TPM4-212ENST00000590180 PLA2G5P39877 138 aa12.87□□□□□ -0.35
TPM4-212ENST00000590180 NUBP1P53384 320 aa12.87□□□□□ -0.35
TPM4-212ENST00000590180 PMS1P54277 932 aaKnown RBP12.87□□□□□ -0.35
TPM4-212ENST00000590180 PTPN5P54829 565 aa12.87□□□□□ -0.35
TPM4-212ENST00000590180 STARD6P59095 220 aa12.87□□□□□ -0.35
TPM4-212ENST00000590180 UBE2HP62256 183 aa12.87□□□□□ -0.35
TPM4-212ENST00000590180 PRKCQQ04759 706 aa12.87□□□□□ -0.35
TPM4-212ENST00000590180 ENPEPQ07075 957 aa12.87□□□□□ -0.35
TPM4-212ENST00000590180 KRT39Q6A163 491 aa12.87□□□□□ -0.35
TPM4-212ENST00000590180 TMEM150AQ86TG1 271 aa12.87□□□□□ -0.35
TPM4-212ENST00000590180 ACOT1Q86TX2 421 aa12.87□□□□□ -0.35
TPM4-212ENST00000590180 TAS1R2Q8TE23 839 aa12.87□□□□□ -0.35
TPM4-212ENST00000590180 RSPRY1Q96DX4 576 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms