RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 RNF135Q8IUD6 432 aa15.27■□□□□ 0.03
RETREG3-208ENST00000589797 ZNF560Q96MR9 790 aa15.27■□□□□ 0.03
RETREG3-208ENST00000589797 TMBIM4Q9HC24 238 aa15.27■□□□□ 0.03
RETREG3-208ENST00000589797 GDF3Q9NR23 364 aa15.27■□□□□ 0.03
RETREG3-208ENST00000589797 SNCAIPQ9Y6H5 919 aa15.27■□□□□ 0.03
RETREG3-208ENST00000589797 LAMB4A4D0S4 1761 aa15.26■□□□□ 0.03
RETREG3-208ENST00000589797 BANF1O75531 89 aa15.26■□□□□ 0.03
RETREG3-208ENST00000589797 CFHP08603 1231 aa15.26■□□□□ 0.03
RETREG3-208ENST00000589797 GRIK1P39086 918 aa15.26■□□□□ 0.03
RETREG3-208ENST00000589797 ACVR2BQ13705 512 aa15.26■□□□□ 0.03
RETREG3-208ENST00000589797 ASTE1Q2TB18 679 aaPredicted RBP15.26■□□□□ 0.03
RETREG3-208ENST00000589797 HES6Q96HZ4 224 aa15.26■□□□□ 0.03
RETREG3-208ENST00000589797 NEUROG2Q9H2A3 272 aa15.26■□□□□ 0.03
RETREG3-208ENST00000589797 TXNRD2Q9NNW7 524 aa15.26■□□□□ 0.03
RETREG3-208ENST00000589797 DMAC2Q9NW81 257 aa15.26■□□□□ 0.03
RETREG3-208ENST00000589797 LCMT1Q9UIC8 334 aa15.26■□□□□ 0.03
RETREG3-208ENST00000589797 PPP2R3BQ9Y5P8 575 aa15.26■□□□□ 0.03
RETREG3-208ENST00000589797 M0QYT0 321 aa15.26■□□□□ 0.03
RETREG3-208ENST00000589797 LPXNO60711 386 aa15.26■□□□□ 0.03
RETREG3-208ENST00000589797 CRCPO75575 148 aa15.26■□□□□ 0.03
RETREG3-208ENST00000589797 STAMBPO95630 424 aa15.26■□□□□ 0.03
RETREG3-208ENST00000589797 FNTAP49354 379 aa15.26■□□□□ 0.03
RETREG3-208ENST00000589797 MDH1BQ5I0G3 518 aa15.26■□□□□ 0.03
RETREG3-208ENST00000589797 MROH9Q5TGP6 573 aa15.26■□□□□ 0.03
RETREG3-208ENST00000589797 MFSD14CQ5VZR4 134 aa15.26■□□□□ 0.03
RETREG3-208ENST00000589797 MYCBPAPQ8TBZ2 947 aa15.26■□□□□ 0.03
RETREG3-208ENST00000589797 EDEM1Q92611 657 aa15.26■□□□□ 0.03
RETREG3-208ENST00000589797 SEC16BQ96JE7 1060 aa15.26■□□□□ 0.03
RETREG3-208ENST00000589797 ACO2Q99798 780 aaKnown RBP15.26■□□□□ 0.03
RETREG3-208ENST00000589797 SPON2Q9BUD6 331 aa15.26■□□□□ 0.03
RETREG3-208ENST00000589797 GOLGA2P5Q9HBQ8 144 aa15.26■□□□□ 0.03
RETREG3-208ENST00000589797 MYH8P13535 1937 aa15.26■□□□□ 0.03
RETREG3-208ENST00000589797 NCF2P19878 526 aaPredicted RBP15.26■□□□□ 0.03
RETREG3-208ENST00000589797 HSPA9P38646 679 aaKnown RBP15.26■□□□□ 0.03
RETREG3-208ENST00000589797 ZNF280AP59817 542 aaPredicted RBP15.26■□□□□ 0.03
RETREG3-208ENST00000589797 TAP1Q03518 808 aa15.26■□□□□ 0.03
RETREG3-208ENST00000589797 DEUP1Q05D60 604 aa15.26■□□□□ 0.03
RETREG3-208ENST00000589797 IL31Q6EBC2 164 aa15.26■□□□□ 0.03
RETREG3-208ENST00000589797 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.26■□□□□ 0.038e-8■■■■■ 28.2
RETREG3-208ENST00000589797 BHMTQ93088 406 aa15.26■□□□□ 0.03
RETREG3-208ENST00000589797 PPARGC1AQ9UBK2 798 aaKnown RBP15.26■□□□□ 0.03
RETREG3-208ENST00000589797 TSR3Q9UJK0 312 aaKnown RBP15.26■□□□□ 0.03
RETREG3-208ENST00000589797 MARF1Q9Y4F3 1742 aaKnown RBP15.26■□□□□ 0.03
RETREG3-208ENST00000589797 MAFO75444 373 aaPredicted RBP15.25■□□□□ 0.03
RETREG3-208ENST00000589797 AGTP01019 485 aa15.25■□□□□ 0.03
RETREG3-208ENST00000589797 TRMT10CQ7L0Y3 403 aaKnown RBP15.25■□□□□ 0.03
RETREG3-208ENST00000589797 TMEM192Q8IY95 271 aa15.25■□□□□ 0.03
RETREG3-208ENST00000589797 R3HDM2Q9Y2K5 976 aaKnown RBP15.25■□□□□ 0.03
RETREG3-208ENST00000589797 A0A0B4J269 797 aa15.25■□□□□ 0.03
RETREG3-208ENST00000589797 CFAP69A5D8W1 941 aa15.25■□□□□ 0.03
RETREG3-208ENST00000589797 MEFVO15553 781 aaPredicted RBP15.25■□□□□ 0.03
RETREG3-208ENST00000589797 RARGP13631 454 aa15.25■□□□□ 0.03
RETREG3-208ENST00000589797 MAGEA9P43362 315 aa15.25■□□□□ 0.03
RETREG3-208ENST00000589797 CCDC117Q8IWD4 279 aaPredicted RBP15.25■□□□□ 0.03
RETREG3-208ENST00000589797 CAVIN3Q969G5 261 aa15.25■□□□□ 0.03
RETREG3-208ENST00000589797 UBP1Q9NZI7 540 aa15.25■□□□□ 0.03
RETREG3-208ENST00000589797 MICAL2O94851 1124 aa15.25■□□□□ 0.03
RETREG3-208ENST00000589797 ARIH2O95376 493 aa15.25■□□□□ 0.03
RETREG3-208ENST00000589797 CCDC130P13994 396 aa15.25■□□□□ 0.03
RETREG3-208ENST00000589797 ARF4P18085 180 aaPredicted RBP15.25■□□□□ 0.03
RETREG3-208ENST00000589797 MIPP30301 263 aa15.25■□□□□ 0.03
RETREG3-208ENST00000589797 MAP3K7CLP57077 242 aa15.25■□□□□ 0.03
RETREG3-208ENST00000589797 MMRN1Q13201 1228 aa15.25■□□□□ 0.03
RETREG3-208ENST00000589797 DCLK3Q9C098 648 aa15.25■□□□□ 0.03
RETREG3-208ENST00000589797 ETNK1Q9HBU6 452 aa15.25■□□□□ 0.03
RETREG3-208ENST00000589797 DDIT4Q9NX09 232 aa15.25■□□□□ 0.03
RETREG3-208ENST00000589797 GAS2O43903 313 aaKnown RBP15.24■□□□□ 0.03
RETREG3-208ENST00000589797 RECQL4O94761 1208 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 PECAM1P16284 738 aaPredicted RBP15.24■□□□□ 0.03
RETREG3-208ENST00000589797 KRT4P19013 534 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 STAT4Q14765 748 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 SPATS2Q86XZ4 545 aaKnown RBP15.24■□□□□ 0.03
RETREG3-208ENST00000589797 MTMR14Q8NCE2 650 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 ABHD16BQ9H3Z7 469 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 TLK1Q9UKI8 766 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 CYB561D2O14569 222 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 LYPLA2O95372 231 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 OR1G1P47890 313 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 TAF6P49848 677 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 TSPY1Q01534 308 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 NPNTQ6UXI9 565 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 LRIG3Q6UXM1 1119 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 TLK2Q86UE8 772 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 GPR20Q99678 358 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 O00370 1275 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 GSTA1P08263 222 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 GSTA2P09210 222 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 GHRP10912 638 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 VDRP11473 427 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 CPB1P15086 417 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 PRPSAP1Q14558 356 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 MAP7D1Q3KQU3 841 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 MFSD14AQ96MC6 490 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 B3GNT5Q9BYG0 378 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 RSAD1Q9HA92 442 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 APOBEC3GQ9HC16 384 aaKnown RBP15.24■□□□□ 0.03
RETREG3-208ENST00000589797 NPHS2Q9NP85 383 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 ARHGAP28Q9P2N2 729 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 GON4LQ3T8J9 2241 aa15.24■□□□□ 0.03
RETREG3-208ENST00000589797 RBAK-RBAKDNI3L0D1 243 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms