RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 REEP2Q9BRK0 252 aa16.28■□□□□ 0.2
SF3A2-204ENST00000589118 RAB34Q9BZG1 259 aa16.28■□□□□ 0.2
SF3A2-204ENST00000589118 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.28■□□□□ 0.2
SF3A2-204ENST00000589118 TMEM74BQ9NUR3 256 aa16.28■□□□□ 0.2
SF3A2-204ENST00000589118 DPP3Q9NY33 737 aa16.28■□□□□ 0.2
SF3A2-204ENST00000589118 KLK13Q9UKR3 277 aa16.28■□□□□ 0.2
SF3A2-204ENST00000589118 CIZ1Q9ULV3 898 aaPredicted RBP16.28■□□□□ 0.2
SF3A2-204ENST00000589118 PCDHB5Q9Y5E4 795 aa16.28■□□□□ 0.2
SF3A2-204ENST00000589118 ATXN2Q99700 1313 aaKnown RBP16.27■□□□□ 0.2
SF3A2-204ENST00000589118 C2orf78A6NCI8 922 aa16.27■□□□□ 0.2
SF3A2-204ENST00000589118 K7ENM7 598 aa16.27■□□□□ 0.2
SF3A2-204ENST00000589118 K7EQS6 105 aa16.27■□□□□ 0.2
SF3A2-204ENST00000589118 SEC24BO95487 1268 aa16.27■□□□□ 0.2
SF3A2-204ENST00000589118 CEACAM1P13688 526 aa16.27■□□□□ 0.2
SF3A2-204ENST00000589118 TAF6P49848 677 aa16.27■□□□□ 0.2
SF3A2-204ENST00000589118 WNT7BP56706 349 aa16.27■□□□□ 0.2
SF3A2-204ENST00000589118 MESP2Q0VG99 397 aa16.27■□□□□ 0.2
SF3A2-204ENST00000589118 PDGFRLQ15198 375 aa16.27■□□□□ 0.2
SF3A2-204ENST00000589118 ZNF77Q15935 545 aa16.27■□□□□ 0.2
SF3A2-204ENST00000589118 EML3Q32P44 896 aa16.27■□□□□ 0.2
SF3A2-204ENST00000589118 LRSAM1Q6UWE0 723 aa16.27■□□□□ 0.2
SF3A2-204ENST00000589118 CYP2U1Q7Z449 544 aa16.27■□□□□ 0.2
SF3A2-204ENST00000589118 EFCAB13Q8IY85 973 aa16.27■□□□□ 0.2
SF3A2-204ENST00000589118 CPA6Q8N4T0 437 aa16.27■□□□□ 0.2
SF3A2-204ENST00000589118 MYCT1Q8N699 235 aa16.27■□□□□ 0.2
SF3A2-204ENST00000589118 USP33Q8TEY7 942 aa16.27■□□□□ 0.2
SF3A2-204ENST00000589118 OSCP1Q8WVF1 389 aa16.27■□□□□ 0.2
SF3A2-204ENST00000589118 TIPINQ9BVW5 301 aa16.27■□□□□ 0.2
SF3A2-204ENST00000589118 ZHX3Q9H4I2 956 aa16.27■□□□□ 0.2
SF3A2-204ENST00000589118 LHX6Q9UPM6 363 aa16.27■□□□□ 0.2
SF3A2-204ENST00000589118 STK24Q9Y6E0 443 aa16.27■□□□□ 0.2
SF3A2-204ENST00000589118 HELZP42694 1942 aaKnown RBP16.27■□□□□ 0.19
SF3A2-204ENST00000589118 CEP192Q8TEP8 1941 aa16.27■□□□□ 0.19
SF3A2-204ENST00000589118 GON4LQ3T8J9 2241 aa16.26■□□□□ 0.19
SF3A2-204ENST00000589118 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.26■□□□□ 0.19
SF3A2-204ENST00000589118 VWA3AA6NCI4 1184 aa16.26■□□□□ 0.19
SF3A2-204ENST00000589118 CSRP1P21291 193 aaKnown RBP16.26■□□□□ 0.19
SF3A2-204ENST00000589118 OPRD1P41143 372 aa16.26■□□□□ 0.19
SF3A2-204ENST00000589118 SLC6A11P48066 632 aa16.26■□□□□ 0.19
SF3A2-204ENST00000589118 IFNAR2P48551 515 aa16.26■□□□□ 0.19
SF3A2-204ENST00000589118 ZXDBP98169 803 aa16.26■□□□□ 0.19
SF3A2-204ENST00000589118 KARSQ15046 597 aaKnown RBP16.26■□□□□ 0.19
SF3A2-204ENST00000589118 FBXO43Q4G163 708 aa16.26■□□□□ 0.19
SF3A2-204ENST00000589118 USP39Q53GS9 565 aaKnown RBP16.26■□□□□ 0.19
SF3A2-204ENST00000589118 HYIQ5T013 277 aa16.26■□□□□ 0.19
SF3A2-204ENST00000589118 EMC10Q5UCC4 262 aa16.26■□□□□ 0.19
SF3A2-204ENST00000589118 TMEM92Q6UXU6 159 aa16.26■□□□□ 0.19
SF3A2-204ENST00000589118 TMEFF1Q8IYR6 380 aa16.26■□□□□ 0.19
SF3A2-204ENST00000589118 DEFB119Q8N690 84 aa16.26■□□□□ 0.19
SF3A2-204ENST00000589118 ZSWIM2Q8NEG5 633 aa16.26■□□□□ 0.19
SF3A2-204ENST00000589118 MDGA1Q8NFP4 955 aa16.26■□□□□ 0.19
SF3A2-204ENST00000589118 KIF9Q9HAQ2 790 aa16.26■□□□□ 0.19
SF3A2-204ENST00000589118 LARSQ9P2J5 1176 aaKnown RBP16.26■□□□□ 0.19
SF3A2-204ENST00000589118 PI4KAP42356 2102 aa16.25■□□□□ 0.19
SF3A2-204ENST00000589118 KPNA7A9QM74 516 aa16.25■□□□□ 0.19
SF3A2-204ENST00000589118 TAF4O00268 1085 aa16.25■□□□□ 0.19
SF3A2-204ENST00000589118 PIGRP01833 764 aa16.25■□□□□ 0.19
SF3A2-204ENST00000589118 CKMP06732 381 aa16.25■□□□□ 0.19
SF3A2-204ENST00000589118 PTGER3P43115 390 aa16.25■□□□□ 0.19
SF3A2-204ENST00000589118 FAM193AP78312 1265 aa16.25■□□□□ 0.19
SF3A2-204ENST00000589118 AMPD2Q01433 879 aa16.25■□□□□ 0.19
SF3A2-204ENST00000589118 FAM160A1Q05DH4 1040 aa16.25■□□□□ 0.19
SF3A2-204ENST00000589118 ACAP1Q15027 740 aa16.25■□□□□ 0.19
SF3A2-204ENST00000589118 GAB4Q2WGN9 574 aa16.25■□□□□ 0.19
SF3A2-204ENST00000589118 CRELD2Q6UXH1 353 aaPredicted RBP16.25■□□□□ 0.19
SF3A2-204ENST00000589118 OSTM1Q86WC4 334 aa16.25■□□□□ 0.19
SF3A2-204ENST00000589118 GPBP1Q86WP2 473 aa16.25■□□□□ 0.19
SF3A2-204ENST00000589118 DCP1BQ8IZD4 617 aaKnown RBP16.25■□□□□ 0.19
SF3A2-204ENST00000589118 FAM184AQ8NB25 1140 aa16.25■□□□□ 0.19
SF3A2-204ENST00000589118 SH3RF2Q8TEC5 729 aa16.25■□□□□ 0.19
SF3A2-204ENST00000589118 C2orf15Q8WU43 125 aaKnown RBP16.25■□□□□ 0.19
SF3A2-204ENST00000589118 GTF3C4Q9UKN8 822 aa16.25■□□□□ 0.19
SF3A2-204ENST00000589118 DSEQ9UL01 958 aa16.25■□□□□ 0.19
SF3A2-204ENST00000589118 LIMCH1Q9UPQ0 1083 aa16.25■□□□□ 0.19
SF3A2-204ENST00000589118 FASNP49327 2511 aaKnown RBP16.25■□□□□ 0.19
SF3A2-204ENST00000589118 PCNX2A6NKB5 2137 aa16.24■□□□□ 0.19
SF3A2-204ENST00000589118 CSH1P0DML2 217 aa16.24■□□□□ 0.19
SF3A2-204ENST00000589118 CSH2P0DML3 217 aa16.24■□□□□ 0.19
SF3A2-204ENST00000589118 DDX6P26196 483 aaKnown RBP eCLIP16.24■□□□□ 0.19
SF3A2-204ENST00000589118 PRPHP41219 470 aa16.24■□□□□ 0.19
SF3A2-204ENST00000589118 USP4Q13107 963 aa16.24■□□□□ 0.19
SF3A2-204ENST00000589118 ZNF268Q14587 947 aaPredicted RBP16.24■□□□□ 0.19
SF3A2-204ENST00000589118 KYAT1Q16773 422 aa16.24■□□□□ 0.19
SF3A2-204ENST00000589118 TMEM119Q4V9L6 283 aa16.24■□□□□ 0.19
SF3A2-204ENST00000589118 TRIM61Q5EBN2 209 aa16.24■□□□□ 0.19
SF3A2-204ENST00000589118 ADALQ6DHV7 355 aa16.24■□□□□ 0.19
SF3A2-204ENST00000589118 RASSF3Q86WH2 238 aa16.24■□□□□ 0.19
SF3A2-204ENST00000589118 OR2I1PQ8NGU4 316 aa16.24■□□□□ 0.19
SF3A2-204ENST00000589118 ACDQ96AP0 544 aa16.24■□□□□ 0.19
SF3A2-204ENST00000589118 FNBP1Q96RU3 617 aa16.24■□□□□ 0.19
SF3A2-204ENST00000589118 FIZ1Q96SL8 496 aa16.24■□□□□ 0.19
SF3A2-204ENST00000589118 GCNT4Q9P109 453 aa16.24■□□□□ 0.19
SF3A2-204ENST00000589118 MBD1Q9UIS9 605 aaPredicted RBP16.24■□□□□ 0.19
SF3A2-204ENST00000589118 L1RE1Q9UN81 338 aa16.24■□□□□ 0.19
SF3A2-204ENST00000589118 CACNA1EQ15878 2313 aa16.24■□□□□ 0.19
SF3A2-204ENST00000589118 TRAK2O60296 914 aa16.23■□□□□ 0.19
SF3A2-204ENST00000589118 ATP2C2O75185 946 aa16.23■□□□□ 0.19
SF3A2-204ENST00000589118 NOL4O94818 638 aa16.23■□□□□ 0.19
SF3A2-204ENST00000589118 FAM13AO94988 1023 aa16.23■□□□□ 0.19
SF3A2-204ENST00000589118 USP17L7P0C7H9 530 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms