RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 ZNF667Q5HYK9 610 aa11.21□□□□□ -0.61
TPM4-209ENST00000588483 CLEC17AQ6ZS10 378 aa11.21□□□□□ -0.61
TPM4-209ENST00000588483 SPATA2LQ8IUW3 424 aaPredicted RBP11.21□□□□□ -0.61
TPM4-209ENST00000588483 MFSD6LQ8IWD5 586 aa11.21□□□□□ -0.61
TPM4-209ENST00000588483 SIX5Q8N196 739 aa11.21□□□□□ -0.61
TPM4-209ENST00000588483 TMEM105Q8N8V8 129 aa11.21□□□□□ -0.61
TPM4-209ENST00000588483 ZSCAN18Q8TBC5 510 aaPredicted RBP11.21□□□□□ -0.61
TPM4-209ENST00000588483 DNASE1L2Q92874 299 aa11.21□□□□□ -0.61
TPM4-209ENST00000588483 MYLPFQ96A32 169 aa11.21□□□□□ -0.61
TPM4-209ENST00000588483 PCED1BQ96HM7 432 aa11.21□□□□□ -0.61
TPM4-209ENST00000588483 SPATA17Q96L03 361 aa11.21□□□□□ -0.61
TPM4-209ENST00000588483 PI4K2AQ9BTU6 479 aa11.21□□□□□ -0.61
TPM4-209ENST00000588483 PLA2G2FQ9BZM2 168 aa11.21□□□□□ -0.61
TPM4-209ENST00000588483 SNX25Q9H3E2 840 aa11.21□□□□□ -0.61
TPM4-209ENST00000588483 TASP1Q9H6P5 420 aa11.21□□□□□ -0.61
TPM4-209ENST00000588483 TMEM8AQ9HCN3 771 aa11.21□□□□□ -0.61
TPM4-209ENST00000588483 UXTQ9UBK9 157 aaPredicted RBP11.21□□□□□ -0.61
TPM4-209ENST00000588483 VPS13AQ96RL7 3174 aa11.21□□□□□ -0.62
TPM4-209ENST00000588483 ANAPC1Q9H1A4 1944 aa11.21□□□□□ -0.62
TPM4-209ENST00000588483 USP34Q70CQ2 3546 aa11.21□□□□□ -0.62
TPM4-209ENST00000588483 NCANO14594 1321 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 ZNF638Q14966 1978 aaKnown RBP11.2□□□□□ -0.62
TPM4-209ENST00000588483 TULP1O00294 542 aaPredicted RBP11.2□□□□□ -0.62
TPM4-209ENST00000588483 ARNTLO00327 626 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 CETN3O15182 167 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 ATP2C2O75185 946 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 HLA-DRAP01903 254 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 KRT13P13646 458 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 P4HA1P13674 534 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 GJA1P17302 382 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 PSMC3P17980 439 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 PTPN1P18031 435 aaKnown RBP11.2□□□□□ -0.62
TPM4-209ENST00000588483 CCNE1P24864 410 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 ASPAP45381 313 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 MLLT6P55198 1093 aaPredicted RBP11.2□□□□□ -0.62
TPM4-209ENST00000588483 NLRP12P59046 1061 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 PSMC1P62191 440 aaKnown RBP11.2□□□□□ -0.62
TPM4-209ENST00000588483 FKBP3Q00688 224 aaKnown RBP11.2□□□□□ -0.62
TPM4-209ENST00000588483 PRKCQQ04759 706 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 PPP3CAQ08209 521 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 INCA1Q0VD86 236 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 MORC3Q14149 939 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 ARHGAP15Q53QZ3 475 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 STXBP5Q5T5C0 1151 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 IER5LQ5T953 404 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 KRT39Q6A163 491 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 VITQ6UXI7 678 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 UNC93AQ86WB7 457 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 B3GALNT2Q8NCR0 500 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 PRSS33Q8NF86 280 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 OR6B3Q8NGW1 331 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 ERCC4Q92889 916 aaPredicted RBP11.2□□□□□ -0.62
TPM4-209ENST00000588483 DHTKD1Q96HY7 919 aaPredicted RBP11.2□□□□□ -0.62
TPM4-209ENST00000588483 GCNAQ96QF7 691 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 TSG101Q99816 390 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 TTLL2Q9BWV7 592 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 BCO2Q9BYV7 579 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 OSBPL6Q9BZF3 934 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 ATXN3LQ9H3M9 355 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 MFSD1Q9H3U5 465 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 FAM124BQ9H5Z6 455 aaPredicted RBP11.2□□□□□ -0.62
TPM4-209ENST00000588483 SMYD3Q9H7B4 428 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 MAGEC2Q9UBF1 373 aaPredicted RBP11.2□□□□□ -0.62
TPM4-209ENST00000588483 NXF1Q9UBU9 619 aaKnown RBP11.2□□□□□ -0.62
TPM4-209ENST00000588483 MAN1B1Q9UKM7 699 aa11.2□□□□□ -0.62
TPM4-209ENST00000588483 A8MXQ7 604 aa11.19□□□□□ -0.62
TPM4-209ENST00000588483 PSMA7O14818 248 aa11.19□□□□□ -0.62
TPM4-209ENST00000588483 TRIM66O15016 1216 aa11.19□□□□□ -0.62
TPM4-209ENST00000588483 GALR2O43603 387 aaPredicted RBP11.19□□□□□ -0.62
TPM4-209ENST00000588483 STX10O60499 249 aa11.19□□□□□ -0.62
TPM4-209ENST00000588483 TADA3O75528 432 aa11.19□□□□□ -0.62
TPM4-209ENST00000588483 PDGFRBP09619 1106 aa11.19□□□□□ -0.62
TPM4-209ENST00000588483 TRIM49P0CI25 452 aa11.19□□□□□ -0.62
TPM4-209ENST00000588483 TRIM49CP0CI26 452 aa11.19□□□□□ -0.62
TPM4-209ENST00000588483 EPB41P11171 864 aaKnown RBP11.19□□□□□ -0.62
TPM4-209ENST00000588483 BMP6P22004 513 aa11.19□□□□□ -0.62
TPM4-209ENST00000588483 ANP32AP39687 249 aaKnown RBP11.19□□□□□ -0.62
TPM4-209ENST00000588483 GPR15P49685 360 aa11.19□□□□□ -0.62
TPM4-209ENST00000588483 PMS1P54277 932 aaKnown RBP11.19□□□□□ -0.62
TPM4-209ENST00000588483 NOP14P78316 857 aaKnown RBP11.19□□□□□ -0.62
TPM4-209ENST00000588483 TCF15Q12870 199 aa11.19□□□□□ -0.62
TPM4-209ENST00000588483 STIM1Q13586 685 aa11.19□□□□□ -0.62
TPM4-209ENST00000588483 MLF2Q15773 248 aaPredicted RBP11.19□□□□□ -0.62
TPM4-209ENST00000588483 DDR2Q16832 855 aa11.19□□□□□ -0.62
TPM4-209ENST00000588483 ANKRD40Q6AI12 368 aa11.19□□□□□ -0.62
TPM4-209ENST00000588483 ARID3BQ8IVW6 561 aaPredicted RBP11.19□□□□□ -0.62
TPM4-209ENST00000588483 CRYBG2Q8N1P7 616 aa11.19□□□□□ -0.62
TPM4-209ENST00000588483 ST13P5Q8NFI4 369 aaPredicted RBP11.19□□□□□ -0.62
TPM4-209ENST00000588483 FAM200AQ8TCP9 573 aa11.19□□□□□ -0.62
TPM4-209ENST00000588483 TAS1R2Q8TE23 839 aa11.19□□□□□ -0.62
TPM4-209ENST00000588483 GIPC2Q8TF65 315 aa11.19□□□□□ -0.62
TPM4-209ENST00000588483 IRF7Q92985 503 aa11.19□□□□□ -0.62
TPM4-209ENST00000588483 SHDQ96IW2 340 aa11.19□□□□□ -0.62
TPM4-209ENST00000588483 TNIP3Q96KP6 325 aa11.19□□□□□ -0.62
TPM4-209ENST00000588483 C8orf48Q96LL4 319 aa11.19□□□□□ -0.62
TPM4-209ENST00000588483 TRMT61BQ9BVS5 477 aaKnown RBP11.19□□□□□ -0.62
TPM4-209ENST00000588483 ELOVL4Q9GZR5 314 aa11.19□□□□□ -0.62
TPM4-209ENST00000588483 SDCBP2Q9H190 292 aa11.19□□□□□ -0.62
TPM4-209ENST00000588483 DPEP3Q9H4B8 488 aa11.19□□□□□ -0.62
TPM4-209ENST00000588483 SLITRK6Q9H5Y7 841 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms