RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 SLC1A1P43005 524 aa11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 PAFAH1B1P43034 410 aa11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 ACADSBP45954 432 aa11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 GABRB2P47870 512 aa11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 OR1G1P47890 313 aa11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 AMPD2Q01433 879 aa11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 CKAP4Q07065 602 aaKnown RBP11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 ELAVL2Q12926 359 aaKnown RBP11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 PTP4A2Q12974 167 aa11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 MAPRE1Q15691 268 aaKnown RBP11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 PPP1R26Q5T8A7 1209 aaPredicted RBP11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 MFSD5Q6N075 450 aa11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 C1orf131Q8NDD1 294 aaKnown RBP11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 MYRIPQ8NFW9 859 aa11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 FEZF2Q8TBJ5 459 aa11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 RPGRIP1Q96KN7 1286 aa11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 HSFY1Q96LI6 401 aa11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 ACBD6Q9BR61 282 aa11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 TLR10Q9BXR5 811 aa11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 MCOLN1Q9GZU1 580 aa11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 OSGEPQ9NPF4 335 aa11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 PRKAG2Q9UGJ0 569 aa11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 HMGXB4Q9UGU5 601 aa11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 FAN1Q9Y2M0 1017 aa11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 ALG6Q9Y672 507 aa11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 SCN1AP35498 2009 aa11.11□□□□□ -0.63
CHMP1B-202ENST00000588284 SIGLEC16A6NMB1 481 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 FANCGO15287 622 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 FTCDO95954 541 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 AMHP03971 560 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 SSTR3P32745 418 aaPredicted RBP11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 BCAT1P54687 386 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 GSCP56915 257 aaPredicted RBP11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 PSMC1P62191 440 aaKnown RBP11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 BST2Q10589 180 aaKnown RBP11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 ORC1Q13415 861 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 MAMLD1Q13495 774 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 MESDQ14696 234 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 CLUL1Q15846 466 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 GOLGA7BQ2TAP0 167 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 PPP1R15BQ5SWA1 713 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 DNAJC24Q6P3W2 148 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 DCUN1D2Q6PH85 259 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 CD300LGQ6UXG3 332 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 NT5DC3Q86UY8 548 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 OSTM1Q86WC4 334 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 ZNF280BQ86YH2 543 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 ZDHHC17Q8IUH5 632 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 CRIPAKQ8N1N5 446 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 UBL4BQ8N7F7 174 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 C12orf29Q8N999 325 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 B3GALNT2Q8NCR0 500 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 C3orf20Q8ND61 904 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 C3orf58Q8NDZ4 430 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 UBA3Q8TBC4 463 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 SLC35F5Q8WV83 523 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 SYT15Q9BQS2 421 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 UBXN6Q9BZV1 441 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 NRDE2Q9H7Z3 1164 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 PRDM5Q9NQX1 630 aaPredicted RBP11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 IP6K2Q9UHH9 426 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 COG5Q9UP83 839 aa11.1□□□□□ -0.63
CHMP1B-202ENST00000588284 TMEM191CA6NGB0 347 aa11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 TBKBP1A7MCY6 615 aa11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 NRP1O14786 923 aa11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 SYN3O14994 580 aa11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 BAIAP3O94812 1187 aa11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 KRT3P12035 628 aa11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 BRCC3P46736 316 aa11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 FOXK1P85037 733 aa11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 PLCB3Q01970 1234 aa11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 PIGHQ14442 188 aaPredicted RBP11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 CFAP221Q4G0U5 840 aa11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 PKDCCQ504Y2 493 aa11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 CCDC181Q5TID7 509 aa11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 OVOS1Q6IE37 1185 aa11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 TMEM110Q86TL2 294 aa11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 MYCBPAPQ8TBZ2 947 aa11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 HES6Q96HZ4 224 aa11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 OSBPL9Q96SU4 736 aa11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 NCAPGQ9BPX3 1015 aa11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 PAAF1Q9BRP4 392 aa11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 MED10Q9BTT4 135 aa11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 CARD6Q9BX69 1037 aa11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 PLVAPQ9BX97 442 aa11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 SLC4A5Q9BY07 1137 aa11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 DUSP16Q9BY84 665 aa11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 OXCT2Q9BYC2 517 aaPredicted RBP11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 ST7Q9NRC1 585 aa11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 FAM49BQ9NUQ9 324 aa11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 ANAPC7Q9UJX3 599 aa11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.09□□□□□ -0.63
CHMP1B-202ENST00000588284 CCDC66A2RUB6 948 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 CTAGE15A4D2H0 777 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 TRIM43BA6NCK2 446 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 SPOPO43791 374 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 DGKIO75912 1065 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 PROSCO94903 275 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 OAZ2O95190 189 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms