RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 NAT8LQ8N9F0 302 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 GLIS1Q8NBF1 620 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 REPS2Q8NFH8 660 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 ASAP3Q8TDY4 903 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 UTP4Q969X6 686 aaKnown RBP19.51■□□□□ 0.71
DDX39A-206ENST00000587730 ZNF570Q96NI8 536 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 CYTH2Q99418 400 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 TRIM55Q9BYV6 548 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 ACAD9Q9H845 621 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 MYOZ2Q9NPC6 264 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 NRBP2Q9NSY0 501 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 ADAMTS5Q9UNA0 930 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 SSC5DA1L4H1 1573 aa19.5■□□□□ 0.71
DDX39A-206ENST00000587730 A8MUI8 341 aa19.5■□□□□ 0.71
DDX39A-206ENST00000587730 ADCY3O60266 1144 aa19.5■□□□□ 0.71
DDX39A-206ENST00000587730 CCDC22O60826 627 aa19.5■□□□□ 0.71
DDX39A-206ENST00000587730 TARSP26639 723 aaKnown RBP19.5■□□□□ 0.71
DDX39A-206ENST00000587730 MARK3P27448 753 aa19.5■□□□□ 0.71
DDX39A-206ENST00000587730 BACE1P56817 501 aa19.5■□□□□ 0.71
DDX39A-206ENST00000587730 ATP13A4Q4VNC1 1196 aa19.5■□□□□ 0.71
DDX39A-206ENST00000587730 DCAF15Q66K64 600 aa19.5■□□□□ 0.71
DDX39A-206ENST00000587730 GPAT2Q6NUI2 795 aa19.5■□□□□ 0.71
DDX39A-206ENST00000587730 PAXIP1Q6ZW49 1069 aaPredicted RBP19.5■□□□□ 0.71
DDX39A-206ENST00000587730 PRUNE1Q86TP1 453 aa19.5■□□□□ 0.71
DDX39A-206ENST00000587730 PALM2Q8IXS6 379 aa19.5■□□□□ 0.71
DDX39A-206ENST00000587730 OR5B17Q8NGF7 314 aa19.5■□□□□ 0.71
DDX39A-206ENST00000587730 TMEM143Q96AN5 459 aa19.5■□□□□ 0.71
DDX39A-206ENST00000587730 C12orf42Q96LP6 360 aa19.5■□□□□ 0.71
DDX39A-206ENST00000587730 PAFAH2Q99487 392 aa19.5■□□□□ 0.71
DDX39A-206ENST00000587730 TMEM121Q9BTD3 319 aa19.5■□□□□ 0.71
DDX39A-206ENST00000587730 TBC1D10AQ9BXI6 508 aa19.5■□□□□ 0.71
DDX39A-206ENST00000587730 MRPL4Q9BYD3 311 aaKnown RBP19.5■□□□□ 0.71
DDX39A-206ENST00000587730 HAPLN2Q9GZV7 340 aa19.5■□□□□ 0.71
DDX39A-206ENST00000587730 SLCO1B3Q9NPD5 702 aa19.5■□□□□ 0.71
DDX39A-206ENST00000587730 HAO1Q9UJM8 370 aa19.5■□□□□ 0.71
DDX39A-206ENST00000587730 MTO1Q9Y2Z2 717 aaKnown RBP19.5■□□□□ 0.71
DDX39A-206ENST00000587730 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.49■□□□□ 0.71
DDX39A-206ENST00000587730 GAS2O43903 313 aaKnown RBP19.49■□□□□ 0.71
DDX39A-206ENST00000587730 TOM1L1O75674 476 aa19.49■□□□□ 0.71
DDX39A-206ENST00000587730 GNAZP19086 355 aa19.49■□□□□ 0.71
DDX39A-206ENST00000587730 GPX6P59796 221 aa19.49■□□□□ 0.71
DDX39A-206ENST00000587730 TRPC3Q13507 836 aa19.49■□□□□ 0.71
DDX39A-206ENST00000587730 TAF11Q15544 211 aa19.49■□□□□ 0.71
DDX39A-206ENST00000587730 C3orf62Q6ZUJ4 267 aa19.49■□□□□ 0.71
DDX39A-206ENST00000587730 LONP2Q86WA8 852 aa19.49■□□□□ 0.71
DDX39A-206ENST00000587730 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.49■□□□□ 0.71
DDX39A-206ENST00000587730 CPT1BQ92523 772 aa19.49■□□□□ 0.71
DDX39A-206ENST00000587730 SLC7A6OSQ96CW6 309 aaPredicted RBP19.49■□□□□ 0.71
DDX39A-206ENST00000587730 TEPSINQ96N21 525 aa19.49■□□□□ 0.71
DDX39A-206ENST00000587730 TEX13BQ9BXU2 312 aa19.49■□□□□ 0.71
DDX39A-206ENST00000587730 MAK16Q9BXY0 300 aaKnown RBP19.49■□□□□ 0.71
DDX39A-206ENST00000587730 DCLRE1BQ9H816 532 aa19.49■□□□□ 0.71
DDX39A-206ENST00000587730 CISHQ9NSE2 258 aa19.49■□□□□ 0.71
DDX39A-206ENST00000587730 CORO1CQ9ULV4 474 aaPredicted RBP19.49■□□□□ 0.71
DDX39A-206ENST00000587730 IKBKGQ9Y6K9 419 aa19.49■□□□□ 0.71
DDX39A-206ENST00000587730 CLUHO75153 1309 aa19.49■□□□□ 0.71
DDX39A-206ENST00000587730 C3orf70A6NLC5 250 aaPredicted RBP19.48■□□□□ 0.71
DDX39A-206ENST00000587730 DNAJC6O75061 913 aa19.48■□□□□ 0.71
DDX39A-206ENST00000587730 ETS1P14921 441 aa19.48■□□□□ 0.71
DDX39A-206ENST00000587730 PSMA2P25787 234 aa19.48■□□□□ 0.71
DDX39A-206ENST00000587730 STIP1P31948 543 aaKnown RBP19.48■□□□□ 0.71
DDX39A-206ENST00000587730 TSNAXIP1Q2TAA8 658 aa19.48■□□□□ 0.71
DDX39A-206ENST00000587730 BANPQ8N9N5 519 aa19.48■□□□□ 0.71
DDX39A-206ENST00000587730 FAM13CQ8NE31 585 aa19.48■□□□□ 0.71
DDX39A-206ENST00000587730 DNERQ8NFT8 737 aa19.48■□□□□ 0.71
DDX39A-206ENST00000587730 ACTL9Q8TC94 416 aa19.48■□□□□ 0.71
DDX39A-206ENST00000587730 GRID1Q9ULK0 1009 aa19.48■□□□□ 0.71
DDX39A-206ENST00000587730 RIPK3Q9Y572 518 aa19.48■□□□□ 0.71
DDX39A-206ENST00000587730 PEX11AO75192 247 aa19.48■□□□□ 0.71
DDX39A-206ENST00000587730 FAM155BO75949 473 aa19.48■□□□□ 0.71
DDX39A-206ENST00000587730 T-ENOLP0DO92 83 aa19.48■□□□□ 0.71
DDX39A-206ENST00000587730 KRT3P12035 628 aa19.48■□□□□ 0.71
DDX39A-206ENST00000587730 OTUD4Q01804 1114 aaKnown RBP19.48■□□□□ 0.71
DDX39A-206ENST00000587730 OGDHQ02218 1023 aa19.48■□□□□ 0.71
DDX39A-206ENST00000587730 BLMHQ13867 455 aa19.48■□□□□ 0.71
DDX39A-206ENST00000587730 ZRSR2Q15696 482 aaKnown RBP19.48■□□□□ 0.71
DDX39A-206ENST00000587730 STXBP2Q15833 593 aa19.48■□□□□ 0.71
DDX39A-206ENST00000587730 FAM160B1Q5W0V3 765 aa19.48■□□□□ 0.71
DDX39A-206ENST00000587730 CLNKQ7Z7G1 428 aa19.48■□□□□ 0.71
DDX39A-206ENST00000587730 TRIM42Q8IWZ5 723 aa19.48■□□□□ 0.71
DDX39A-206ENST00000587730 LMNTD2Q8IXW0 634 aa19.48■□□□□ 0.71
DDX39A-206ENST00000587730 NAF1Q96HR8 494 aaKnown RBP19.48■□□□□ 0.71
DDX39A-206ENST00000587730 NUDCD1Q96RS6 583 aa19.48■□□□□ 0.71
DDX39A-206ENST00000587730 MANSC1Q9H8J5 431 aa19.48■□□□□ 0.71
DDX39A-206ENST00000587730 KIF9Q9HAQ2 790 aa19.48■□□□□ 0.71
DDX39A-206ENST00000587730 POLIQ9UNA4 740 aa19.48■□□□□ 0.71
DDX39A-206ENST00000587730 IGKV6D-21A0A0A0MT36 114 aa19.47■□□□□ 0.71
DDX39A-206ENST00000587730 A0A1W2PPM1 405 aa19.47■□□□□ 0.71
DDX39A-206ENST00000587730 C19orf81C9J6K1 198 aa19.47■□□□□ 0.71
DDX39A-206ENST00000587730 APOC4-APOC2K7ER74 178 aa19.47■□□□□ 0.71
DDX39A-206ENST00000587730 MCF2LO15068 1137 aa19.47■□□□□ 0.71
DDX39A-206ENST00000587730 OGTO15294 1046 aa19.47■□□□□ 0.71
DDX39A-206ENST00000587730 APOC2P02655 101 aa19.47■□□□□ 0.71
DDX39A-206ENST00000587730 MT-ND3P03897 115 aa19.47■□□□□ 0.71
DDX39A-206ENST00000587730 TCF4P15884 667 aa19.47■□□□□ 0.71
DDX39A-206ENST00000587730 SLC25A11Q02978 314 aaKnown RBP19.47■□□□□ 0.71
DDX39A-206ENST00000587730 TFDP1Q14186 410 aa19.47■□□□□ 0.71
DDX39A-206ENST00000587730 TAF1BQ53T94 588 aaPredicted RBP19.47■□□□□ 0.71
DDX39A-206ENST00000587730 RHPN2Q8IUC4 686 aa19.47■□□□□ 0.71
DDX39A-206ENST00000587730 SPOCK2Q92563 424 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms