RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 TRIOO75962 3097 aa15.82■□□□□ 0.12
ATG4D-207ENST00000587256 MOSPD3O75425 235 aa15.81■□□□□ 0.12
ATG4D-207ENST00000587256 ECI2O75521 394 aa15.81■□□□□ 0.12
ATG4D-207ENST00000587256 BMP6P22004 513 aa15.81■□□□□ 0.12
ATG4D-207ENST00000587256 CDC25CP30307 473 aa15.81■□□□□ 0.12
ATG4D-207ENST00000587256 CDH8P55286 799 aa15.81■□□□□ 0.12
ATG4D-207ENST00000587256 PAK1Q13153 545 aa15.81■□□□□ 0.12
ATG4D-207ENST00000587256 CCDC40Q4G0X9 1142 aa15.81■□□□□ 0.12
ATG4D-207ENST00000587256 FAM78AQ5JUQ0 283 aa15.81■□□□□ 0.12
ATG4D-207ENST00000587256 B3GALNT2Q8NCR0 500 aa15.81■□□□□ 0.12
ATG4D-207ENST00000587256 STKLD1Q8NE28 680 aa15.81■□□□□ 0.12
ATG4D-207ENST00000587256 ZSCAN18Q8TBC5 510 aaPredicted RBP15.81■□□□□ 0.12
ATG4D-207ENST00000587256 MYCBPAPQ8TBZ2 947 aa15.81■□□□□ 0.12
ATG4D-207ENST00000587256 SMARCD2Q92925 531 aa15.81■□□□□ 0.12
ATG4D-207ENST00000587256 PCED1BQ96HM7 432 aa15.81■□□□□ 0.12
ATG4D-207ENST00000587256 ASB16Q96NS5 453 aa15.81■□□□□ 0.12
ATG4D-207ENST00000587256 RPP25Q9BUL9 199 aaKnown RBP15.81■□□□□ 0.12
ATG4D-207ENST00000587256 NIF3L1Q9GZT8 377 aa15.81■□□□□ 0.12
ATG4D-207ENST00000587256 SDCBP2Q9H190 292 aa15.81■□□□□ 0.12
ATG4D-207ENST00000587256 CLSTN2Q9H4D0 955 aa15.81■□□□□ 0.12
ATG4D-207ENST00000587256 KIAA1468Q9P260 1216 aa15.81■□□□□ 0.12
ATG4D-207ENST00000587256 ARMCX3Q9UH62 379 aaPredicted RBP15.81■□□□□ 0.12
ATG4D-207ENST00000587256 NME7Q9Y5B8 376 aa15.81■□□□□ 0.12
ATG4D-207ENST00000587256 ATP8B3O60423 1300 aa15.8■□□□□ 0.12
ATG4D-207ENST00000587256 PPP1R3GB7ZBB8 358 aa15.8■□□□□ 0.12
ATG4D-207ENST00000587256 PDGFBP01127 241 aaPredicted RBP15.8■□□□□ 0.12
ATG4D-207ENST00000587256 CSH1P0DML2 217 aa15.8■□□□□ 0.12
ATG4D-207ENST00000587256 CSH2P0DML3 217 aa15.8■□□□□ 0.12
ATG4D-207ENST00000587256 PTPN1P18031 435 aaKnown RBP15.8■□□□□ 0.12
ATG4D-207ENST00000587256 TRIM21P19474 475 aaKnown RBP15.8■□□□□ 0.12
ATG4D-207ENST00000587256 RFX1P22670 979 aa15.8■□□□□ 0.12
ATG4D-207ENST00000587256 BDNFP23560 247 aa15.8■□□□□ 0.12
ATG4D-207ENST00000587256 ANXA13P27216 316 aa15.8■□□□□ 0.12
ATG4D-207ENST00000587256 MAGEA11P43364 429 aa15.8■□□□□ 0.12
ATG4D-207ENST00000587256 ASPAP45381 313 aa15.8■□□□□ 0.12
ATG4D-207ENST00000587256 CYP4F8P98187 520 aa15.8■□□□□ 0.12
ATG4D-207ENST00000587256 STXBP5Q5T5C0 1151 aa15.8■□□□□ 0.12
ATG4D-207ENST00000587256 GPR158Q5T848 1215 aa15.8■□□□□ 0.12
ATG4D-207ENST00000587256 TTI2Q6NXR4 508 aa15.8■□□□□ 0.12
ATG4D-207ENST00000587256 VSTM1Q6UX27 236 aa15.8■□□□□ 0.12
ATG4D-207ENST00000587256 CLEC17AQ6ZS10 378 aa15.8■□□□□ 0.12
ATG4D-207ENST00000587256 GAREM2Q75VX8 874 aa15.8■□□□□ 0.12
ATG4D-207ENST00000587256 BMP8AQ7Z5Y6 402 aa15.8■□□□□ 0.12
ATG4D-207ENST00000587256 FBXL6Q8N531 539 aa15.8■□□□□ 0.12
ATG4D-207ENST00000587256 FBXL13Q8NEE6 735 aa15.8■□□□□ 0.12
ATG4D-207ENST00000587256 TNIP3Q96KP6 325 aa15.8■□□□□ 0.12
ATG4D-207ENST00000587256 ZSWIM3Q96MP5 696 aa15.8■□□□□ 0.12
ATG4D-207ENST00000587256 CEP63Q96MT8 703 aa15.8■□□□□ 0.12
ATG4D-207ENST00000587256 GPR88Q9GZN0 384 aa15.8■□□□□ 0.12
ATG4D-207ENST00000587256 ELOVL4Q9GZR5 314 aa15.8■□□□□ 0.12
ATG4D-207ENST00000587256 ZFP14Q9HCL3 533 aa15.8■□□□□ 0.12
ATG4D-207ENST00000587256 SLC38A8A6NNN8 435 aa15.79■□□□□ 0.12
ATG4D-207ENST00000587256 GOLGA6L22H0YM25 854 aa15.79■□□□□ 0.12
ATG4D-207ENST00000587256 FCARP24071 287 aa15.79■□□□□ 0.12
ATG4D-207ENST00000587256 GRIK1P39086 918 aa15.79■□□□□ 0.12
ATG4D-207ENST00000587256 STX17P56962 302 aa15.79■□□□□ 0.12
ATG4D-207ENST00000587256 TANGO2Q6ICL3 276 aa15.79■□□□□ 0.12
ATG4D-207ENST00000587256 POTEHQ6S545 545 aa15.79■□□□□ 0.12
ATG4D-207ENST00000587256 SIX5Q8N196 739 aa15.79■□□□□ 0.12
ATG4D-207ENST00000587256 ELSPBP1Q96BH3 223 aa15.79■□□□□ 0.12
ATG4D-207ENST00000587256 DUSP9Q99956 384 aaKnown RBP15.79■□□□□ 0.12
ATG4D-207ENST00000587256 MED10Q9BTT4 135 aa15.79■□□□□ 0.12
ATG4D-207ENST00000587256 NUP62CLQ9H1M0 184 aa15.79■□□□□ 0.12
ATG4D-207ENST00000587256 IL21Q9HBE4 155 aa15.79■□□□□ 0.12
ATG4D-207ENST00000587256 METTL14Q9HCE5 456 aaKnown RBP15.79■□□□□ 0.12
ATG4D-207ENST00000587256 SLC2A4RGQ9NR83 387 aa15.79■□□□□ 0.12
ATG4D-207ENST00000587256 UXTQ9UBK9 157 aaPredicted RBP15.79■□□□□ 0.12
ATG4D-207ENST00000587256 CA14Q9ULX7 337 aa15.79■□□□□ 0.12
ATG4D-207ENST00000587256 ZDBF2Q9HCK1 2354 aa15.79■□□□□ 0.12
ATG4D-207ENST00000587256 TRIM66O15016 1216 aa15.78■□□□□ 0.12
ATG4D-207ENST00000587256 NOL4O94818 638 aa15.78■□□□□ 0.12
ATG4D-207ENST00000587256 HMGA1P17096 107 aaKnown RBP15.78■□□□□ 0.12
ATG4D-207ENST00000587256 CD58P19256 250 aa15.78■□□□□ 0.12
ATG4D-207ENST00000587256 VIPR2P41587 438 aa15.78■□□□□ 0.12
ATG4D-207ENST00000587256 NDST1P52848 882 aa15.78■□□□□ 0.12
ATG4D-207ENST00000587256 GPC5P78333 572 aa15.78■□□□□ 0.12
ATG4D-207ENST00000587256 ORC1Q13415 861 aa15.78■□□□□ 0.12
ATG4D-207ENST00000587256 GRM2Q14416 872 aa15.78■□□□□ 0.12
ATG4D-207ENST00000587256 WDR44Q5JSH3 913 aa15.78■□□□□ 0.12
ATG4D-207ENST00000587256 FOXR2Q6PJQ5 311 aa15.78■□□□□ 0.12
ATG4D-207ENST00000587256 ACOT1Q86TX2 421 aa15.78■□□□□ 0.12
ATG4D-207ENST00000587256 FLCNQ8NFG4 579 aa15.78■□□□□ 0.12
ATG4D-207ENST00000587256 SLC35C1Q96A29 364 aa15.78■□□□□ 0.12
ATG4D-207ENST00000587256 BCO2Q9BYV7 579 aa15.78■□□□□ 0.12
ATG4D-207ENST00000587256 ZNF518BQ9C0D4 1074 aa15.78■□□□□ 0.12
ATG4D-207ENST00000587256 APOBEC3GQ9HC16 384 aaKnown RBP15.78■□□□□ 0.12
ATG4D-207ENST00000587256 ARHGEF3Q9NR81 526 aa15.78■□□□□ 0.12
ATG4D-207ENST00000587256 WNT16Q9UBV4 365 aa15.78■□□□□ 0.12
ATG4D-207ENST00000587256 HMGXB4Q9UGU5 601 aa15.78■□□□□ 0.12
ATG4D-207ENST00000587256 RAPGEFL1Q9UHV5 662 aa15.78■□□□□ 0.12
ATG4D-207ENST00000587256 F8VP50 259 aa15.77■□□□□ 0.12
ATG4D-207ENST00000587256 DPYSL4O14531 572 aa15.77■□□□□ 0.12
ATG4D-207ENST00000587256 NLRP12P59046 1061 aa15.77■□□□□ 0.12
ATG4D-207ENST00000587256 MCCD1P59942 119 aaPredicted RBP15.77■□□□□ 0.12
ATG4D-207ENST00000587256 PFKPQ01813 784 aa15.77■□□□□ 0.12
ATG4D-207ENST00000587256 CBWD6Q4V339 395 aa15.77■□□□□ 0.12
ATG4D-207ENST00000587256 CBWD3Q5JTY5 395 aa15.77■□□□□ 0.12
ATG4D-207ENST00000587256 CBWD5Q5RIA9 395 aa15.77■□□□□ 0.12
ATG4D-207ENST00000587256 FRMD5Q7Z6J6 570 aa15.77■□□□□ 0.12
ATG4D-207ENST00000587256 FILIP1Q7Z7B0 1213 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms