RNA–Protein interactions for RNA: ENST00000586080.1

R3HDM4-202, Transcript of R3H domain containing 4, humanhuman

TSL 4

Gene R3HDM4, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-202ENST00000586080 PTPN1P18031 435 aaKnown RBP23.13■■□□□ 1.29
R3HDM4-202ENST00000586080 BDNFP23560 247 aa23.13■■□□□ 1.29
R3HDM4-202ENST00000586080 GTF2H1P32780 548 aa23.13■■□□□ 1.29
R3HDM4-202ENST00000586080 STX17P56962 302 aa23.13■■□□□ 1.29
R3HDM4-202ENST00000586080 NOP14P78316 857 aaKnown RBP23.13■■□□□ 1.29
R3HDM4-202ENST00000586080 ARHGAP15Q53QZ3 475 aa23.13■■□□□ 1.29
R3HDM4-202ENST00000586080 FAM78AQ5JUQ0 283 aa23.13■■□□□ 1.29
R3HDM4-202ENST00000586080 KRT39Q6A163 491 aa23.13■■□□□ 1.29
R3HDM4-202ENST00000586080 GAREM2Q75VX8 874 aa23.13■■□□□ 1.29
R3HDM4-202ENST00000586080 B3GALNT2Q8NCR0 500 aa23.13■■□□□ 1.29
R3HDM4-202ENST00000586080 MYCBPAPQ8TBZ2 947 aa23.13■■□□□ 1.29
R3HDM4-202ENST00000586080 PCED1BQ96HM7 432 aa23.13■■□□□ 1.29
R3HDM4-202ENST00000586080 ZSWIM3Q96MP5 696 aa23.13■■□□□ 1.29
R3HDM4-202ENST00000586080 GBP4Q96PP9 640 aa23.13■■□□□ 1.29
R3HDM4-202ENST00000586080 SDCBP2Q9H190 292 aa23.13■■□□□ 1.29
R3HDM4-202ENST00000586080 ARMCX3Q9UH62 379 aaPredicted RBP23.13■■□□□ 1.29
R3HDM4-202ENST00000586080 RAPGEFL1Q9UHV5 662 aa23.13■■□□□ 1.29
R3HDM4-202ENST00000586080 BICDL2A1A5D9 508 aa23.12■■□□□ 1.29
R3HDM4-202ENST00000586080 CSH1P0DML2 217 aa23.12■■□□□ 1.29
R3HDM4-202ENST00000586080 CSH2P0DML3 217 aa23.12■■□□□ 1.29
R3HDM4-202ENST00000586080 CDC25CP30307 473 aa23.12■■□□□ 1.29
R3HDM4-202ENST00000586080 CYP4F8P98187 520 aa23.12■■□□□ 1.29
R3HDM4-202ENST00000586080 PAK1Q13153 545 aa23.12■■□□□ 1.29
R3HDM4-202ENST00000586080 CCDC40Q4G0X9 1142 aa23.12■■□□□ 1.29
R3HDM4-202ENST00000586080 STXBP5Q5T5C0 1151 aa23.12■■□□□ 1.29
R3HDM4-202ENST00000586080 BMP8AQ7Z5Y6 402 aa23.12■■□□□ 1.29
R3HDM4-202ENST00000586080 TRIML1Q8N9V2 468 aa23.12■■□□□ 1.29
R3HDM4-202ENST00000586080 ZSCAN18Q8TBC5 510 aaPredicted RBP23.12■■□□□ 1.29
R3HDM4-202ENST00000586080 ASB16Q96NS5 453 aa23.12■■□□□ 1.29
R3HDM4-202ENST00000586080 CLSTN2Q9H4D0 955 aa23.12■■□□□ 1.29
R3HDM4-202ENST00000586080 ZFP14Q9HCL3 533 aa23.12■■□□□ 1.29
R3HDM4-202ENST00000586080 CA14Q9ULX7 337 aa23.12■■□□□ 1.29
R3HDM4-202ENST00000586080 HCN4Q9Y3Q4 1203 aa23.12■■□□□ 1.29
R3HDM4-202ENST00000586080 NOTCH4Q99466 2003 aa23.11■■□□□ 1.29
R3HDM4-202ENST00000586080 ECI2O75521 394 aa23.11■■□□□ 1.29
R3HDM4-202ENST00000586080 GRIK1P39086 918 aa23.11■■□□□ 1.29
R3HDM4-202ENST00000586080 MAGEA11P43364 429 aa23.11■■□□□ 1.29
R3HDM4-202ENST00000586080 ASPAP45381 313 aa23.11■■□□□ 1.29
R3HDM4-202ENST00000586080 ORC1Q13415 861 aa23.11■■□□□ 1.29
R3HDM4-202ENST00000586080 GPR158Q5T848 1215 aa23.11■■□□□ 1.29
R3HDM4-202ENST00000586080 TANGO2Q6ICL3 276 aa23.11■■□□□ 1.29
R3HDM4-202ENST00000586080 TTI2Q6NXR4 508 aa23.11■■□□□ 1.29
R3HDM4-202ENST00000586080 SIX5Q8N196 739 aa23.11■■□□□ 1.29
R3HDM4-202ENST00000586080 FBXL6Q8N531 539 aa23.11■■□□□ 1.29
R3HDM4-202ENST00000586080 SMARCD2Q92925 531 aa23.11■■□□□ 1.29
R3HDM4-202ENST00000586080 CEP63Q96MT8 703 aa23.11■■□□□ 1.29
R3HDM4-202ENST00000586080 GPR88Q9GZN0 384 aa23.11■■□□□ 1.29
R3HDM4-202ENST00000586080 APOBEC3GQ9HC16 384 aaKnown RBP23.11■■□□□ 1.29
R3HDM4-202ENST00000586080 TRIOO75962 3097 aa23.1■■□□□ 1.29
R3HDM4-202ENST00000586080 SLC38A8A6NNN8 435 aa23.1■■□□□ 1.29
R3HDM4-202ENST00000586080 RFX1P22670 979 aa23.1■■□□□ 1.29
R3HDM4-202ENST00000586080 ANXA13P27216 316 aa23.1■■□□□ 1.29
R3HDM4-202ENST00000586080 GPC5P78333 572 aa23.1■■□□□ 1.29
R3HDM4-202ENST00000586080 VSTM1Q6UX27 236 aa23.1■■□□□ 1.29
R3HDM4-202ENST00000586080 CLEC17AQ6ZS10 378 aa23.1■■□□□ 1.29
R3HDM4-202ENST00000586080 FLCNQ8NFG4 579 aa23.1■■□□□ 1.29
R3HDM4-202ENST00000586080 ELSPBP1Q96BH3 223 aa23.1■■□□□ 1.29
R3HDM4-202ENST00000586080 TNIP3Q96KP6 325 aa23.1■■□□□ 1.29
R3HDM4-202ENST00000586080 DUSP9Q99956 384 aaKnown RBP23.1■■□□□ 1.29
R3HDM4-202ENST00000586080 MED10Q9BTT4 135 aa23.1■■□□□ 1.29
R3HDM4-202ENST00000586080 PLA2G2FQ9BZM2 168 aa23.1■■□□□ 1.29
R3HDM4-202ENST00000586080 NIF3L1Q9GZT8 377 aa23.1■■□□□ 1.29
R3HDM4-202ENST00000586080 IL21Q9HBE4 155 aa23.1■■□□□ 1.29
R3HDM4-202ENST00000586080 MYO10Q9HD67 2058 aa23.1■■□□□ 1.29
R3HDM4-202ENST00000586080 CLDN5O00501 218 aa23.09■■□□□ 1.29
R3HDM4-202ENST00000586080 HMGA1P17096 107 aaKnown RBP23.09■■□□□ 1.29
R3HDM4-202ENST00000586080 FCARP24071 287 aa23.09■■□□□ 1.29
R3HDM4-202ENST00000586080 VIPR2P41587 438 aa23.09■■□□□ 1.29
R3HDM4-202ENST00000586080 NDST1P52848 882 aa23.09■■□□□ 1.29
R3HDM4-202ENST00000586080 GRM2Q14416 872 aa23.09■■□□□ 1.29
R3HDM4-202ENST00000586080 ACOT1Q86TX2 421 aa23.09■■□□□ 1.29
R3HDM4-202ENST00000586080 GPIHBP1Q8IV16 184 aa23.09■■□□□ 1.29
R3HDM4-202ENST00000586080 FBXL13Q8NEE6 735 aa23.09■■□□□ 1.29
R3HDM4-202ENST00000586080 ZNF518BQ9C0D4 1074 aa23.09■■□□□ 1.29
R3HDM4-202ENST00000586080 METTL14Q9HCE5 456 aaKnown RBP23.09■■□□□ 1.29
R3HDM4-202ENST00000586080 LMBRD1Q9NUN5 540 aa23.09■■□□□ 1.29
R3HDM4-202ENST00000586080 HMGXB4Q9UGU5 601 aa23.09■■□□□ 1.29
R3HDM4-202ENST00000586080 ATP8B3O60423 1300 aa23.08■■□□□ 1.29
R3HDM4-202ENST00000586080 STK25O00506 426 aa23.08■■□□□ 1.29
R3HDM4-202ENST00000586080 TRIM66O15016 1216 aa23.08■■□□□ 1.29
R3HDM4-202ENST00000586080 LRRN2O75325 713 aa23.08■■□□□ 1.29
R3HDM4-202ENST00000586080 CD58P19256 250 aa23.08■■□□□ 1.29
R3HDM4-202ENST00000586080 CBWD6Q4V339 395 aa23.08■■□□□ 1.29
R3HDM4-202ENST00000586080 WDR44Q5JSH3 913 aa23.08■■□□□ 1.29
R3HDM4-202ENST00000586080 CBWD3Q5JTY5 395 aa23.08■■□□□ 1.29
R3HDM4-202ENST00000586080 CBWD5Q5RIA9 395 aa23.08■■□□□ 1.29
R3HDM4-202ENST00000586080 FILIP1Q7Z7B0 1213 aa23.08■■□□□ 1.29
R3HDM4-202ENST00000586080 SEMA4DQ92854 862 aa23.08■■□□□ 1.29
R3HDM4-202ENST00000586080 B3GNT5Q9BYG0 378 aa23.08■■□□□ 1.29
R3HDM4-202ENST00000586080 ELOVL4Q9GZR5 314 aa23.08■■□□□ 1.29
R3HDM4-202ENST00000586080 NUP62CLQ9H1M0 184 aa23.08■■□□□ 1.29
R3HDM4-202ENST00000586080 SLC2A4RGQ9NR83 387 aa23.08■■□□□ 1.29
R3HDM4-202ENST00000586080 RAB20Q9NX57 234 aa23.08■■□□□ 1.29
R3HDM4-202ENST00000586080 UXTQ9UBK9 157 aaPredicted RBP23.08■■□□□ 1.29
R3HDM4-202ENST00000586080 WNT16Q9UBV4 365 aa23.08■■□□□ 1.29
R3HDM4-202ENST00000586080 F8VP50 259 aa23.07■■□□□ 1.28
R3HDM4-202ENST00000586080 NOL4O94818 638 aa23.07■■□□□ 1.28
R3HDM4-202ENST00000586080 TRIM21P19474 475 aaKnown RBP23.07■■□□□ 1.28
R3HDM4-202ENST00000586080 NLRP12P59046 1061 aa23.07■■□□□ 1.28
R3HDM4-202ENST00000586080 FRMD5Q7Z6J6 570 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms