RNA–Protein interactions for RNA: ENST00000584923.1

SNORD3A-201, Transcript of small nucleolar RNA, C/D box 3A, humanhuman

BASIC

Gene SNORD3A, Length 699 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3A-201ENST00000584923 SPATA2LQ8IUW3 424 aaPredicted RBP11.12□□□□□ -0.63
SNORD3A-201ENST00000584923 TDRD5Q8NAT2 981 aaKnown RBP11.12□□□□□ -0.63
SNORD3A-201ENST00000584923 ENOX1Q8TC92 643 aaKnown RBP11.12□□□□□ -0.63
SNORD3A-201ENST00000584923 ANP32BQ92688 251 aaKnown RBP11.12□□□□□ -0.63
SNORD3A-201ENST00000584923 PSMG2Q969U7 264 aa11.12□□□□□ -0.63
SNORD3A-201ENST00000584923 ELMO3Q96BJ8 720 aa11.12□□□□□ -0.63
SNORD3A-201ENST00000584923 CEP295NLQ96MC4 621 aa11.12□□□□□ -0.63
SNORD3A-201ENST00000584923 LRRC3Q9BY71 257 aa11.12□□□□□ -0.63
SNORD3A-201ENST00000584923 NIF3L1Q9GZT8 377 aa11.12□□□□□ -0.63
SNORD3A-201ENST00000584923 HCFC1R1Q9NWW0 138 aa11.12□□□□□ -0.63
SNORD3A-201ENST00000584923 EPS15L1Q9UBC2 864 aa11.12□□□□□ -0.63
SNORD3A-201ENST00000584923 MAGEC2Q9UBF1 373 aaPredicted RBP11.12□□□□□ -0.63
SNORD3A-201ENST00000584923 RAPGEFL1Q9UHV5 662 aa11.12□□□□□ -0.63
SNORD3A-201ENST00000584923 TRIOO75962 3097 aa11.12□□□□□ -0.63
SNORD3A-201ENST00000584923 SMTNL1A8MU46 457 aa11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 BECN2A8MW95 431 aa11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 CLSTN1O94985 981 aa11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 FGF19O95750 216 aa11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 AFPP02771 609 aaKnown RBP11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 LAMP2P13473 410 aa11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 ATF6P18850 670 aa11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 CYP2F1P24903 491 aa11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 RAP1GAPP47736 663 aa11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 NDST1P52848 882 aa11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 PSMC1P62191 440 aaKnown RBP11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 VEPH1Q14D04 833 aa11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 PRSS36Q5K4E3 855 aa11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 LUZP1Q86V48 1076 aa11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 FAM114A1Q8IWE2 563 aa11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 TTC9BQ8N6N2 239 aa11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 B3GALNT2Q8NCR0 500 aa11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 EHBP1Q8NDI1 1231 aa11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 LMO3Q8TAP4 145 aa11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 FGF13Q92913 245 aa11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 TATDN2Q93075 761 aa11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 NXPE3Q969Y0 559 aa11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 MYLPFQ96A32 169 aa11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 PCED1BQ96HM7 432 aa11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 CNOT6LQ96LI5 555 aaKnown RBP11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 MYADMQ96S97 322 aa11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 SEPT5Q99719 369 aaPredicted RBP11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 CORO1BQ9BR76 489 aa11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 DNAI2Q9GZS0 605 aa11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 DPEP3Q9H4B8 488 aa11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 ASAH2Q9NR71 780 aa11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 CDH7Q9ULB5 785 aa11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 MRPS23Q9Y3D9 190 aaKnown RBP11.11□□□□□ -0.63
SNORD3A-201ENST00000584923 ZNF318Q5VUA4 2279 aa11.1□□□□□ -0.63
SNORD3A-201ENST00000584923 GOLGA6L19H0YKK7 550 aa11.1□□□□□ -0.63
SNORD3A-201ENST00000584923 CILPO75339 1184 aa11.1□□□□□ -0.63
SNORD3A-201ENST00000584923 SOAT2O75908 522 aa11.1□□□□□ -0.63
SNORD3A-201ENST00000584923 CSH1P0DML2 217 aa11.1□□□□□ -0.63
SNORD3A-201ENST00000584923 CSH2P0DML3 217 aa11.1□□□□□ -0.63
SNORD3A-201ENST00000584923 ALADP13716 330 aa11.1□□□□□ -0.63
SNORD3A-201ENST00000584923 TRIM21P19474 475 aaKnown RBP11.1□□□□□ -0.63
SNORD3A-201ENST00000584923 GBP2P32456 591 aaPredicted RBP11.1□□□□□ -0.63
SNORD3A-201ENST00000584923 CYP27A1Q02318 531 aa11.1□□□□□ -0.63
SNORD3A-201ENST00000584923 CCDC142Q17RM4 750 aa11.1□□□□□ -0.63
SNORD3A-201ENST00000584923 MDH1BQ5I0G3 518 aa11.1□□□□□ -0.63
SNORD3A-201ENST00000584923 SCARA5Q6ZMJ2 495 aa11.1□□□□□ -0.63
SNORD3A-201ENST00000584923 PDZD4Q76G19 769 aaPredicted RBP11.1□□□□□ -0.63
SNORD3A-201ENST00000584923 GET4Q7L5D6 327 aaPredicted RBP11.1□□□□□ -0.63
SNORD3A-201ENST00000584923 TMC8Q8IU68 726 aa11.1□□□□□ -0.63
SNORD3A-201ENST00000584923 DHX40Q8IX18 779 aaKnown RBP11.1□□□□□ -0.63
SNORD3A-201ENST00000584923 HS6ST3Q8IZP7 471 aa11.1□□□□□ -0.63
SNORD3A-201ENST00000584923 ITFG1Q8TB96 612 aa11.1□□□□□ -0.63
SNORD3A-201ENST00000584923 MYRFLQ96LU7 910 aa11.1□□□□□ -0.63
SNORD3A-201ENST00000584923 NT5C1AQ9BXI3 368 aa11.1□□□□□ -0.63
SNORD3A-201ENST00000584923 GPR88Q9GZN0 384 aa11.1□□□□□ -0.63
SNORD3A-201ENST00000584923 GDE1Q9NZC3 331 aa11.1□□□□□ -0.63
SNORD3A-201ENST00000584923 IGSF9Q9P2J2 1179 aa11.1□□□□□ -0.63
SNORD3A-201ENST00000584923 LIMD1Q9UGP4 676 aa11.1□□□□□ -0.63
SNORD3A-201ENST00000584923 MUTYHQ9UIF7 546 aa11.1□□□□□ -0.63
SNORD3A-201ENST00000584923 PTPRDP23468 1912 aa11.09□□□□□ -0.63
SNORD3A-201ENST00000584923 GTPBP10A4D1E9 387 aaKnown RBP11.09□□□□□ -0.63
SNORD3A-201ENST00000584923 MOSPD3O75425 235 aa11.09□□□□□ -0.63
SNORD3A-201ENST00000584923 MYL4P12829 197 aa11.09□□□□□ -0.63
SNORD3A-201ENST00000584923 HMGA1P17096 107 aaKnown RBP11.09□□□□□ -0.63
SNORD3A-201ENST00000584923 SP100P23497 879 aaPredicted RBP11.09□□□□□ -0.63
SNORD3A-201ENST00000584923 BDNFP23560 247 aa11.09□□□□□ -0.63
SNORD3A-201ENST00000584923 TBXAS1P24557 533 aaPredicted RBP11.09□□□□□ -0.63
SNORD3A-201ENST00000584923 GRIK1P39086 918 aa11.09□□□□□ -0.63
SNORD3A-201ENST00000584923 CCR2P41597 374 aa11.09□□□□□ -0.63
SNORD3A-201ENST00000584923 MTIF2P46199 727 aaKnown RBP11.09□□□□□ -0.63
SNORD3A-201ENST00000584923 YWHAEP62258 255 aaKnown RBP11.09□□□□□ -0.63
SNORD3A-201ENST00000584923 CUL2Q13617 745 aa11.09□□□□□ -0.63
SNORD3A-201ENST00000584923 TAF12Q16514 161 aa11.09□□□□□ -0.63
SNORD3A-201ENST00000584923 DDR2Q16832 855 aa11.09□□□□□ -0.63
SNORD3A-201ENST00000584923 SLC5A9Q2M3M2 681 aa11.09□□□□□ -0.63
SNORD3A-201ENST00000584923 SMYD5Q6GMV2 418 aa11.09□□□□□ -0.63
SNORD3A-201ENST00000584923 PAQR9Q6ZVX9 377 aa11.09□□□□□ -0.63
SNORD3A-201ENST00000584923 ACOT1Q86TX2 421 aa11.09□□□□□ -0.63
SNORD3A-201ENST00000584923 CREBRFQ8IUR6 639 aa11.09□□□□□ -0.63
SNORD3A-201ENST00000584923 NPAS3Q8IXF0 933 aa11.09□□□□□ -0.63
SNORD3A-201ENST00000584923 AOPEPQ8N6M6 819 aa11.09□□□□□ -0.63
SNORD3A-201ENST00000584923 WHAMMQ8TF30 809 aa11.09□□□□□ -0.63
SNORD3A-201ENST00000584923 GIPC2Q8TF65 315 aa11.09□□□□□ -0.63
SNORD3A-201ENST00000584923 TRMT2BQ96GJ1 504 aaKnown RBP11.09□□□□□ -0.63
SNORD3A-201ENST00000584923 SPATA17Q96L03 361 aa11.09□□□□□ -0.63
SNORD3A-201ENST00000584923 C8orf48Q96LL4 319 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms